RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 FMN1Q68DA7 1419 aa13.14□□□□□ -0.31
PVT1-213ENST00000522414 AKNAQ7Z591 1439 aa13.14□□□□□ -0.31
PVT1-213ENST00000522414 CDK13Q14004 1512 aaKnown RBP13.14□□□□□ -0.31
PVT1-213ENST00000522414 ARHGAP33O14559 1287 aa13.13□□□□□ -0.31
PVT1-213ENST00000522414 PLA2G2EQ9NZK7 142 aa13.13□□□□□ -0.31
PVT1-213ENST00000522414 ZMYM4Q5VZL5 1548 aa13.13□□□□□ -0.31
PVT1-213ENST00000522414 FANCAO15360 1455 aa13.12□□□□□ -0.31
PVT1-213ENST00000522414 ARHGEF40Q8TER5 1519 aa13.12□□□□□ -0.31
PVT1-213ENST00000522414 DENND4BO75064 1496 aaPredicted RBP13.11□□□□□ -0.31
PVT1-213ENST00000522414 LRRIQ1Q96JM4 1722 aa13.11□□□□□ -0.31
PVT1-213ENST00000522414 DMRTA1Q5VZB9 504 aa13.11□□□□□ -0.31
PVT1-213ENST00000522414 HCSTQ9UBK5 93 aa13.11□□□□□ -0.31
PVT1-213ENST00000522414 ADAMTSL3P82987 1691 aa13.11□□□□□ -0.31
PVT1-213ENST00000522414 HECW2Q9P2P5 1572 aa13.11□□□□□ -0.31
PVT1-213ENST00000522414 CDK11AQ9UQ88 783 aaPredicted RBP13.1□□□□□ -0.31
PVT1-213ENST00000522414 PSEN2P49810 448 aa13.09□□□□□ -0.31
PVT1-213ENST00000522414 EFCAB2Q5VUJ9 269 aa13.09□□□□□ -0.31
PVT1-213ENST00000522414 PTCD2Q8WV60 388 aaKnown RBP13.09□□□□□ -0.31
PVT1-213ENST00000522414 PLCH2O75038 1416 aa13.08□□□□□ -0.32
PVT1-213ENST00000522414 HRO43593 1189 aa13.08□□□□□ -0.32
PVT1-213ENST00000522414 MLECQ14165 292 aa13.08□□□□□ -0.32
PVT1-213ENST00000522414 SCAPERQ9BY12 1400 aa13.07□□□□□ -0.32
PVT1-213ENST00000522414 PTPRMP28827 1452 aa13.07□□□□□ -0.32
PVT1-213ENST00000522414 BCORL1Q5H9F3 1711 aa13.06□□□□□ -0.32
PVT1-213ENST00000522414 MYO5CQ9NQX4 1742 aa13.06□□□□□ -0.32
PVT1-213ENST00000522414 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
PVT1-213ENST00000522414 MAGI2Q86UL8 1455 aa13.05□□□□□ -0.32
PVT1-213ENST00000522414 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
PVT1-213ENST00000522414 AFAP1Q8N556 730 aa13.05□□□□□ -0.32
PVT1-213ENST00000522414 KIF14Q15058 1648 aa13.05□□□□□ -0.32
PVT1-213ENST00000522414 PCF11O94913 1555 aaKnown RBP13.04□□□□□ -0.32
PVT1-213ENST00000522414 TK2O00142 265 aa13.04□□□□□ -0.32
PVT1-213ENST00000522414 TROQ12816 1431 aaPredicted RBP13.04□□□□□ -0.32
PVT1-213ENST00000522414 CASKIN1Q8WXD9 1431 aa13.04□□□□□ -0.32
PVT1-213ENST00000522414 FOXK1P85037 733 aa13.03□□□□□ -0.32
PVT1-213ENST00000522414 PLPP6Q8IY26 295 aa13.03□□□□□ -0.32
PVT1-213ENST00000522414 POGZQ7Z3K3 1410 aa13.03□□□□□ -0.32
PVT1-213ENST00000522414 CCDC18Q5T9S5 1454 aa13.03□□□□□ -0.32
PVT1-213ENST00000522414 SIGLEC1Q9BZZ2 1709 aa13.02□□□□□ -0.32
PVT1-213ENST00000522414 FYCO1Q9BQS8 1478 aa13.02□□□□□ -0.33
PVT1-213ENST00000522414 KDM5CP41229 1560 aa13.01□□□□□ -0.33
PVT1-213ENST00000522414 ZFYVE16Q7Z3T8 1539 aa13□□□□□ -0.33
PVT1-213ENST00000522414 HSPA2P54652 639 aa13□□□□□ -0.33
PVT1-213ENST00000522414 PREX2Q70Z35 1606 aa12.99□□□□□ -0.33
PVT1-213ENST00000522414 MADDQ8WXG6 1647 aa12.99□□□□□ -0.33
PVT1-213ENST00000522414 DSG2Q14126 1118 aa12.99□□□□□ -0.33
PVT1-213ENST00000522414 CDC42BPBQ9Y5S2 1711 aa12.99□□□□□ -0.33
PVT1-213ENST00000522414 CEBPAP49715 358 aaPredicted RBP12.98□□□□□ -0.33
PVT1-213ENST00000522414 GPHNQ9NQX3 736 aaPredicted RBP12.98□□□□□ -0.33
PVT1-213ENST00000522414 REREQ9P2R6 1566 aa12.97□□□□□ -0.33
PVT1-213ENST00000522414 ATP10AO60312 1499 aa12.97□□□□□ -0.33
PVT1-213ENST00000522414 CLIP1P30622 1438 aa12.96□□□□□ -0.33
PVT1-213ENST00000522414 KCTD12Q96CX2 325 aaKnown RBP12.96□□□□□ -0.33
PVT1-213ENST00000522414 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.33
PVT1-213ENST00000522414 ARHGAP5Q13017 1502 aa12.96□□□□□ -0.33
PVT1-213ENST00000522414 ABCC1P33527 1531 aa12.95□□□□□ -0.34
PVT1-213ENST00000522414 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
PVT1-213ENST00000522414 CDC42BPAQ5VT25 1732 aa12.95□□□□□ -0.34
PVT1-213ENST00000522414 ZNF518AQ6AHZ1 1483 aa12.95□□□□□ -0.34
PVT1-213ENST00000522414 RIMS1Q86UR5 1692 aaKnown RBP12.94□□□□□ -0.34
PVT1-213ENST00000522414 LMTK3Q96Q04 1460 aa12.93□□□□□ -0.34
PVT1-213ENST00000522414 ARHGEF12Q9NZN5 1544 aa12.93□□□□□ -0.34
PVT1-213ENST00000522414 ITSN2Q9NZM3 1697 aa12.93□□□□□ -0.34
PVT1-213ENST00000522414 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.34
PVT1-213ENST00000522414 TRAPPC8Q9Y2L5 1435 aa12.92□□□□□ -0.34
PVT1-213ENST00000522414 MLH3Q9UHC1 1453 aa12.91□□□□□ -0.34
PVT1-213ENST00000522414 DIP2CQ9Y2E4 1556 aa12.91□□□□□ -0.34
PVT1-213ENST00000522414 KCNK17Q96T54 332 aa12.91□□□□□ -0.34
PVT1-213ENST00000522414 C9orf84Q5VXU9 1444 aa12.9□□□□□ -0.34
PVT1-213ENST00000522414 FER1L4A9Z1Z3 1794 aa12.9□□□□□ -0.34
PVT1-213ENST00000522414 ABCA6Q8N139 1617 aa12.89□□□□□ -0.35
PVT1-213ENST00000522414 LOC105371045A0A1W2PR82 267 aa12.88□□□□□ -0.35
PVT1-213ENST00000522414 TBC1D12O60347 775 aa12.88□□□□□ -0.35
PVT1-213ENST00000522414 HS6ST3Q8IZP7 471 aa12.88□□□□□ -0.35
PVT1-213ENST00000522414 CFDP1Q9UEE9 299 aaPredicted RBP12.88□□□□□ -0.35
PVT1-213ENST00000522414 AGLP35573 1532 aa12.88□□□□□ -0.35
PVT1-213ENST00000522414 FBXO41Q8TF61 875 aa12.87□□□□□ -0.35
PVT1-213ENST00000522414 VPS9D1Q9Y2B5 631 aa12.87□□□□□ -0.35
PVT1-213ENST00000522414 GPATCH8Q9UKJ3 1502 aaKnown RBP12.87□□□□□ -0.35
PVT1-213ENST00000522414 KIDINS220Q9ULH0 1771 aa12.86□□□□□ -0.35
PVT1-213ENST00000522414 SAMD9LQ8IVG5 1584 aa12.86□□□□□ -0.35
PVT1-213ENST00000522414 OXER1Q8TDS5 423 aa12.86□□□□□ -0.35
PVT1-213ENST00000522414 ZNF644Q9H582 1327 aaPredicted RBP12.86□□□□□ -0.35
PVT1-213ENST00000522414 ESF1Q9H501 851 aaKnown RBP12.85□□□□□ -0.35
PVT1-213ENST00000522414 SPAG9O60271 1321 aaKnown RBP12.85□□□□□ -0.35
PVT1-213ENST00000522414 UPF1Q92900 1129 aaKnown RBP eCLIP12.84□□□□□ -0.35
PVT1-213ENST00000522414 INO80Q9ULG1 1556 aaPredicted RBP12.83□□□□□ -0.36
PVT1-213ENST00000522414 KIAA1107Q9UPP5 1409 aa12.83□□□□□ -0.36
PVT1-213ENST00000522414 EHBP1L1Q8N3D4 1523 aa12.83□□□□□ -0.36
PVT1-213ENST00000522414 MTUS2Q5JR59 1369 aa12.82□□□□□ -0.36
PVT1-213ENST00000522414 CCNB3Q8WWL7 1395 aa12.82□□□□□ -0.36
PVT1-213ENST00000522414 PLXNC1O60486 1568 aa12.82□□□□□ -0.36
PVT1-213ENST00000522414 TIAM1Q13009 1591 aa12.82□□□□□ -0.36
PVT1-213ENST00000522414 CEP162Q5TB80 1403 aa12.82□□□□□ -0.36
PVT1-213ENST00000522414 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
PVT1-213ENST00000522414 PLEKHH2Q8IVE3 1493 aa12.81□□□□□ -0.36
PVT1-213ENST00000522414 PTPN5P54829 565 aa12.81□□□□□ -0.36
PVT1-213ENST00000522414 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
PVT1-213ENST00000522414 SYCP2Q9BX26 1530 aa12.81□□□□□ -0.36
PVT1-213ENST00000522414 PREX1Q8TCU6 1659 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms