RNA–Protein interactions for RNA: ENST00000522326.1

EFCAB13-210, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 4

Gene EFCAB13, Length 541 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-210ENST00000522326 PXYLP1Q8TE99 480 aa12.9□□□□□ -0.34
EFCAB13-210ENST00000522326 METTL3Q86U44 580 aaKnown RBP12.88□□□□□ -0.35
EFCAB13-210ENST00000522326 FAM161AQ3B820 660 aa12.86□□□□□ -0.35
EFCAB13-210ENST00000522326 IL21Q9HBE4 155 aa12.86□□□□□ -0.35
EFCAB13-210ENST00000522326 APLP1P51693 650 aa12.85□□□□□ -0.35
EFCAB13-210ENST00000522326 TJAP1Q5JTD0 557 aa12.84□□□□□ -0.35
EFCAB13-210ENST00000522326 RSPH4AQ5TD94 716 aa12.83□□□□□ -0.36
EFCAB13-210ENST00000522326 MTRQ99707 1265 aa12.83□□□□□ -0.36
EFCAB13-210ENST00000522326 FECHP22830 423 aa12.82□□□□□ -0.36
EFCAB13-210ENST00000522326 KMT5BQ4FZB7 885 aa12.82□□□□□ -0.36
EFCAB13-210ENST00000522326 MAP2K5Q13163 448 aa12.78□□□□□ -0.36
EFCAB13-210ENST00000522326 PCDHB3Q9Y5E6 796 aa12.78□□□□□ -0.36
EFCAB13-210ENST00000522326 CFHP08603 1231 aa12.76□□□□□ -0.37
EFCAB13-210ENST00000522326 DAXXQ9UER7 740 aaPredicted RBP12.76□□□□□ -0.37
EFCAB13-210ENST00000522326 ACTN4O43707 911 aaKnown RBP12.75□□□□□ -0.37
EFCAB13-210ENST00000522326 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.74□□□□□ -0.37
EFCAB13-210ENST00000522326 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
EFCAB13-210ENST00000522326 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
EFCAB13-210ENST00000522326 SLC10A3P09131 477 aa12.72□□□□□ -0.37
EFCAB13-210ENST00000522326 COPS2P61201 443 aa12.72□□□□□ -0.37
EFCAB13-210ENST00000522326 ZPR1O75312 459 aa12.7□□□□□ -0.38
EFCAB13-210ENST00000522326 LMOD2Q6P5Q4 547 aa12.7□□□□□ -0.38
EFCAB13-210ENST00000522326 IRF6O14896 467 aa12.69□□□□□ -0.38
EFCAB13-210ENST00000522326 GGCXP38435 758 aa12.69□□□□□ -0.38
EFCAB13-210ENST00000522326 ZNF516Q92618 1163 aa12.69□□□□□ -0.38
EFCAB13-210ENST00000522326 BLOC1S3Q6QNY0 202 aa12.68□□□□□ -0.38
EFCAB13-210ENST00000522326 RDH13Q8NBN7 331 aa12.68□□□□□ -0.38
EFCAB13-210ENST00000522326 NR1I2O75469 434 aa12.67□□□□□ -0.38
EFCAB13-210ENST00000522326 PHOX2BQ99453 314 aa12.67□□□□□ -0.38
EFCAB13-210ENST00000522326 DDX11L8A8MPP1 907 aa12.65□□□□□ -0.38
EFCAB13-210ENST00000522326 PPP1R18Q6NYC8 613 aa12.63□□□□□ -0.39
EFCAB13-210ENST00000522326 TMUB1Q9BVT8 246 aa12.63□□□□□ -0.39
EFCAB13-210ENST00000522326 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
EFCAB13-210ENST00000522326 CCDC102AQ96A19 550 aa12.62□□□□□ -0.39
EFCAB13-210ENST00000522326 NLRP7Q8WX94 980 aa12.61□□□□□ -0.39
EFCAB13-210ENST00000522326 NKX2-3Q8TAU0 364 aa12.6□□□□□ -0.39
EFCAB13-210ENST00000522326 GCGRP47871 477 aa12.59□□□□□ -0.39
EFCAB13-210ENST00000522326 IRX2Q9BZI1 471 aaPredicted RBP12.58□□□□□ -0.4
EFCAB13-210ENST00000522326 ADH1BP00325 375 aa12.57□□□□□ -0.4
EFCAB13-210ENST00000522326 CLCN1P35523 988 aa12.57□□□□□ -0.4
EFCAB13-210ENST00000522326 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
EFCAB13-210ENST00000522326 GRIPAP1Q4V328 841 aa12.57□□□□□ -0.4
EFCAB13-210ENST00000522326 V9GY48 417 aaPredicted RBP12.57□□□□□ -0.4
EFCAB13-210ENST00000522326 BARGINQ6ZT62 677 aa12.56□□□□□ -0.4
EFCAB13-210ENST00000522326 TLL1O43897 1013 aa12.55□□□□□ -0.4
EFCAB13-210ENST00000522326 ZMYND10O75800 440 aa12.55□□□□□ -0.4
EFCAB13-210ENST00000522326 MDM2Q00987 491 aaPredicted RBP12.55□□□□□ -0.4
EFCAB13-210ENST00000522326 FUT2Q10981 343 aa12.55□□□□□ -0.4
EFCAB13-210ENST00000522326 SCUBE3Q8IX30 993 aa12.55□□□□□ -0.4
EFCAB13-210ENST00000522326 KRI1Q8N9T8 703 aaKnown RBP12.55□□□□□ -0.4
EFCAB13-210ENST00000522326 GPCPD1Q9NPB8 672 aa12.55□□□□□ -0.4
EFCAB13-210ENST00000522326 CD46P15529 392 aa12.54□□□□□ -0.4
EFCAB13-210ENST00000522326 ZC3H15Q8WU90 426 aaKnown RBP12.54□□□□□ -0.4
EFCAB13-210ENST00000522326 MORN1Q5T089 497 aa12.53□□□□□ -0.4
EFCAB13-210ENST00000522326 PUS10Q3MIT2 529 aaKnown RBP12.52□□□□□ -0.41
EFCAB13-210ENST00000522326 PRKD2Q9BZL6 878 aa12.52□□□□□ -0.41
EFCAB13-210ENST00000522326 SALL2Q9Y467 1007 aaPredicted RBP12.51□□□□□ -0.41
EFCAB13-210ENST00000522326 ANKLE1Q8NAG6 615 aa12.5□□□□□ -0.41
EFCAB13-210ENST00000522326 SPSB2Q99619 263 aa12.5□□□□□ -0.41
EFCAB13-210ENST00000522326 SLC6A16Q9GZN6 736 aa12.5□□□□□ -0.41
EFCAB13-210ENST00000522326 USP46P62068 366 aa12.49□□□□□ -0.41
EFCAB13-210ENST00000522326 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
EFCAB13-210ENST00000522326 RNF223E7ERA6 249 aa12.48□□□□□ -0.41
EFCAB13-210ENST00000522326 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
EFCAB13-210ENST00000522326 KDM4AO75164 1064 aa12.47□□□□□ -0.41
EFCAB13-210ENST00000522326 FMNL1O95466 1100 aaPredicted RBP12.47□□□□□ -0.41
EFCAB13-210ENST00000522326 S1PR4O95977 384 aa12.47□□□□□ -0.41
EFCAB13-210ENST00000522326 Q3C1V9 767 aa12.47□□□□□ -0.41
EFCAB13-210ENST00000522326 FAM217BQ9NTX9 383 aaPredicted RBP12.47□□□□□ -0.41
EFCAB13-210ENST00000522326 AMHR2Q16671 573 aa12.46□□□□□ -0.41
EFCAB13-210ENST00000522326 SLC27A5Q9Y2P5 690 aa12.46□□□□□ -0.41
EFCAB13-210ENST00000522326 THAP11Q96EK4 314 aa12.44□□□□□ -0.42
EFCAB13-210ENST00000522326 TTLL12Q14166 644 aaPredicted RBP12.43□□□□□ -0.42
EFCAB13-210ENST00000522326 BRICD5Q6PL45 260 aa12.41□□□□□ -0.42
EFCAB13-210ENST00000522326 SLC19A1P41440 591 aa12.4□□□□□ -0.42
EFCAB13-210ENST00000522326 MSS51Q4VC12 460 aa12.4□□□□□ -0.42
EFCAB13-210ENST00000522326 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
EFCAB13-210ENST00000522326 BCANQ96GW7 911 aa12.39□□□□□ -0.43
EFCAB13-210ENST00000522326 AK7Q96M32 723 aa12.39□□□□□ -0.43
EFCAB13-210ENST00000522326 HOXA2O43364 376 aa12.38□□□□□ -0.43
EFCAB13-210ENST00000522326 SSTR3P32745 418 aaPredicted RBP12.36□□□□□ -0.43
EFCAB13-210ENST00000522326 NRG2O14511 850 aaPredicted RBP12.35□□□□□ -0.43
EFCAB13-210ENST00000522326 PPEF1O14829 653 aaPredicted RBP12.35□□□□□ -0.43
EFCAB13-210ENST00000522326 GFRA3O60609 400 aa12.35□□□□□ -0.43
EFCAB13-210ENST00000522326 GIGYF2Q6Y7W6 1299 aaKnown RBP12.35□□□□□ -0.43
EFCAB13-210ENST00000522326 RNF19BQ6ZMZ0 732 aa12.35□□□□□ -0.43
EFCAB13-210ENST00000522326 REPIN1Q9BWE0 567 aaKnown RBP12.35□□□□□ -0.43
EFCAB13-210ENST00000522326 SPRYD7Q5W111 196 aa12.34□□□□□ -0.43
EFCAB13-210ENST00000522326 FAM160A2Q8N612 972 aaPredicted RBP12.34□□□□□ -0.43
EFCAB13-210ENST00000522326 TRIM66O15016 1216 aa12.33□□□□□ -0.44
EFCAB13-210ENST00000522326 ZNF598Q86UK7 904 aaKnown RBP12.33□□□□□ -0.44
EFCAB13-210ENST00000522326 Q6ZNB5 142 aa12.32□□□□□ -0.44
EFCAB13-210ENST00000522326 USB1Q9BQ65 265 aaKnown RBP12.32□□□□□ -0.44
EFCAB13-210ENST00000522326 RPIAP49247 311 aa12.31□□□□□ -0.44
EFCAB13-210ENST00000522326 DIXDC1Q155Q3 683 aa12.31□□□□□ -0.44
EFCAB13-210ENST00000522326 EMID1Q96A84 441 aaPredicted RBP12.31□□□□□ -0.44
EFCAB13-210ENST00000522326 PDZRN3Q9UPQ7 1066 aa12.31□□□□□ -0.44
EFCAB13-210ENST00000522326 FCF1Q9Y324 198 aaKnown RBP12.31□□□□□ -0.44
EFCAB13-210ENST00000522326 LIAT1Q6ZQX7 453 aa12.3□□□□□ -0.44
EFCAB13-210ENST00000522326 PARP9Q8IXQ6 854 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms