RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 SSR1P43307 286 aaKnown RBP5.79□□□□□ -1.48
PCM1-215ENST00000522275 CCDC173Q0VFZ6 552 aa5.79□□□□□ -1.48
PCM1-215ENST00000522275 CSPP1Q1MSJ5 1256 aa5.79□□□□□ -1.48
PCM1-215ENST00000522275 HIRIP3Q9BW71 556 aaPredicted RBP5.79□□□□□ -1.48
PCM1-215ENST00000522275 SLFN14P0C7P3 912 aa5.78□□□□□ -1.48
PCM1-215ENST00000522275 DNAJC21Q5F1R6 531 aaKnown RBP5.78□□□□□ -1.48
PCM1-215ENST00000522275 NBPF6Q5VWK0 638 aa5.78□□□□□ -1.48
PCM1-215ENST00000522275 NBPF5PQ86XG9 351 aaPredicted RBP5.78□□□□□ -1.48
PCM1-215ENST00000522275 JARID2Q92833 1246 aaPredicted RBP5.78□□□□□ -1.48
PCM1-215ENST00000522275 CALR3Q96L12 384 aaKnown RBP5.78□□□□□ -1.48
PCM1-215ENST00000522275 NBPF4Q96M43 638 aa5.78□□□□□ -1.48
PCM1-215ENST00000522275 TRERF1Q96PN7 1200 aa5.78□□□□□ -1.48
PCM1-215ENST00000522275 PPP1R9BQ96SB3 815 aa5.78□□□□□ -1.48
PCM1-215ENST00000522275 SLKQ9H2G2 1235 aaPredicted RBP5.78□□□□□ -1.48
PCM1-215ENST00000522275 PANK3Q9H999 370 aa5.78□□□□□ -1.48
PCM1-215ENST00000522275 RSPH14Q9UHP6 348 aa5.78□□□□□ -1.48
PCM1-215ENST00000522275 KIF16BQ96L93 1317 aa5.78□□□□□ -1.48
PCM1-215ENST00000522275 CEP162Q5TB80 1403 aa5.78□□□□□ -1.48
PCM1-215ENST00000522275 DHX16O60231 1041 aaKnown RBP5.78□□□□□ -1.48
PCM1-215ENST00000522275 TRAK2O60296 914 aa5.78□□□□□ -1.48
PCM1-215ENST00000522275 TNNT1P13805 278 aa5.78□□□□□ -1.48
PCM1-215ENST00000522275 MFAP1P55081 439 aaKnown RBP5.78□□□□□ -1.48
PCM1-215ENST00000522275 GABPB1Q06547 395 aaPredicted RBP5.78□□□□□ -1.48
PCM1-215ENST00000522275 TMTC2Q8N394 836 aa5.78□□□□□ -1.48
PCM1-215ENST00000522275 DONSONQ9NYP3 566 aa5.78□□□□□ -1.48
PCM1-215ENST00000522275 ZNF853P0CG23 659 aa5.77□□□□□ -1.49
PCM1-215ENST00000522275 ZKSCAN8Q15776 578 aaPredicted RBP5.77□□□□□ -1.49
PCM1-215ENST00000522275 CASC1Q6TDU7 716 aa5.77□□□□□ -1.49
PCM1-215ENST00000522275 MYRIPQ8NFW9 859 aa5.77□□□□□ -1.49
PCM1-215ENST00000522275 TMX1Q9H3N1 280 aa5.77□□□□□ -1.49
PCM1-215ENST00000522275 ZCCHC6Q5VYS8 1495 aaKnown RBP5.77□□□□□ -1.49
PCM1-215ENST00000522275 MCM4P33991 863 aa5.77□□□□□ -1.49
PCM1-215ENST00000522275 TDO2P48775 406 aa5.77□□□□□ -1.49
PCM1-215ENST00000522275 ICE2Q659A1 982 aa5.77□□□□□ -1.49
PCM1-215ENST00000522275 TSC1Q92574 1164 aa5.77□□□□□ -1.49
PCM1-215ENST00000522275 NOL7Q9UMY1 257 aaKnown RBP5.77□□□□□ -1.49
PCM1-215ENST00000522275 CT47B1P0C2W7 299 aaPredicted RBP5.76□□□□□ -1.49
PCM1-215ENST00000522275 CCDC27Q2M243 656 aa5.76□□□□□ -1.49
PCM1-215ENST00000522275 CCDC96Q2M329 555 aa5.76□□□□□ -1.49
PCM1-215ENST00000522275 GAS2L3Q86XJ1 694 aa5.76□□□□□ -1.49
PCM1-215ENST00000522275 SMG6Q86US8 1419 aaKnown RBP5.76□□□□□ -1.49
PCM1-215ENST00000522275 CCDC189A1A4V9 331 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 GUCY2CP25092 1073 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 CTR9Q6PD62 1173 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 SKAP1Q86WV1 359 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 PNISRQ8TF01 805 aaKnown RBP5.75□□□□□ -1.49
PCM1-215ENST00000522275 SLC26A8Q96RN1 970 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 ANTXR1Q9H6X2 564 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 UPF2Q9HAU5 1272 aaKnown RBP5.75□□□□□ -1.49
PCM1-215ENST00000522275 SPINK5Q9NQ38 1064 aaPredicted RBP5.75□□□□□ -1.49
PCM1-215ENST00000522275 U2AF2P26368 475 aaKnown RBP eCLIP5.75□□□□□ -1.494e-7■■■■□ 21.1
PCM1-215ENST00000522275 HS1BP3Q53T59 392 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 DNAJC14Q6Y2X3 702 aaPredicted RBP5.75□□□□□ -1.49
PCM1-215ENST00000522275 ARMCX6Q7L4S7 300 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 PDCL2Q8N4E4 241 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 EXOC6Q8TAG9 804 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 FEZ1Q99689 392 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 BRMS1Q9HCU9 246 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 TOMM22Q9NS69 142 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 RBM28Q9NW13 759 aaKnown RBP5.75□□□□□ -1.49
PCM1-215ENST00000522275 BSDC1Q9NW68 430 aaPredicted RBP5.75□□□□□ -1.49
PCM1-215ENST00000522275 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.75□□□□□ -1.49
PCM1-215ENST00000522275 SUFUQ9UMX1 484 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 NINLQ9Y2I6 1382 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 MRVI1Q9Y6F6 885 aa5.75□□□□□ -1.49
PCM1-215ENST00000522275 MPHOSPH10O00566 681 aaKnown RBP5.74□□□□□ -1.49
PCM1-215ENST00000522275 KIF1CO43896 1103 aaKnown RBP5.74□□□□□ -1.49
PCM1-215ENST00000522275 OGFRQ9NZT2 677 aa5.74□□□□□ -1.49
PCM1-215ENST00000522275 NUDCQ9Y266 331 aa5.74□□□□□ -1.49
PCM1-215ENST00000522275 GTF2F1P35269 517 aaKnown RBP eCLIP5.74□□□□□ -1.49
PCM1-215ENST00000522275 TERF2Q15554 542 aa5.74□□□□□ -1.49
PCM1-215ENST00000522275 CCDC184Q52MB2 194 aa5.74□□□□□ -1.49
PCM1-215ENST00000522275 ITFG2Q969R8 447 aa5.74□□□□□ -1.49
PCM1-215ENST00000522275 FAM212AQ96EL1 285 aa5.74□□□□□ -1.49
PCM1-215ENST00000522275 ERICH4A6NGS2 130 aa5.73□□□□□ -1.49
PCM1-215ENST00000522275 IPO8O15397 1037 aaKnown RBP5.73□□□□□ -1.49
PCM1-215ENST00000522275 BIRC2Q13490 618 aa5.73□□□□□ -1.49
PCM1-215ENST00000522275 FAM161AQ3B820 660 aa5.73□□□□□ -1.49
PCM1-215ENST00000522275 C8orf34Q49A92 452 aa5.73□□□□□ -1.49
PCM1-215ENST00000522275 ZC3H12AQ5D1E8 599 aaKnown RBP5.73□□□□□ -1.49
PCM1-215ENST00000522275 TNPO1Q92973 898 aaKnown RBP5.73□□□□□ -1.49
PCM1-215ENST00000522275 NOL10Q9BSC4 688 aaKnown RBP5.73□□□□□ -1.49
PCM1-215ENST00000522275 MED4Q9NPJ6 270 aa5.73□□□□□ -1.49
PCM1-215ENST00000522275 WDR97A6NE52 1622 aa5.73□□□□□ -1.49
PCM1-215ENST00000522275 CFAP65Q6ZU64 1925 aaKnown RBP5.73□□□□□ -1.49
PCM1-215ENST00000522275 RINLQ6ZS11 566 aa5.73□□□□□ -1.49
PCM1-215ENST00000522275 MNS1Q8NEH6 495 aa5.73□□□□□ -1.49
PCM1-215ENST00000522275 RASSF4Q9H2L5 321 aa5.73□□□□□ -1.49
PCM1-215ENST00000522275 FAM177BA6PVY3 158 aa5.72□□□□□ -1.49
PCM1-215ENST00000522275 PPP1R12AO14974 1030 aaPredicted RBP5.72□□□□□ -1.49
PCM1-215ENST00000522275 NASPP49321 788 aaPredicted RBP5.72□□□□□ -1.49
PCM1-215ENST00000522275 RAD51AP2Q09MP3 1159 aa5.72□□□□□ -1.49
PCM1-215ENST00000522275 LRCH2Q5VUJ6 765 aa5.72□□□□□ -1.49
PCM1-215ENST00000522275 PIK3R5Q8WYR1 880 aa5.72□□□□□ -1.49
PCM1-215ENST00000522275 CXorf56Q9H5V9 222 aa5.72□□□□□ -1.49
PCM1-215ENST00000522275 PRDM2Q13029 1718 aa5.72□□□□□ -1.49
PCM1-215ENST00000522275 CAPN15O75808 1086 aa5.72□□□□□ -1.49
PCM1-215ENST00000522275 GYS2P54840 703 aa5.72□□□□□ -1.49
PCM1-215ENST00000522275 HMGN5P82970 282 aaKnown RBP5.72□□□□□ -1.49
PCM1-215ENST00000522275 MTA1Q13330 715 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms