RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 ADGRF5Q8IZF2 1346 aa19.16■□□□□ 0.66
CLK4-210ENST00000522136 CEP170BQ9Y4F5 1589 aaPredicted RBP19.15■□□□□ 0.66
CLK4-210ENST00000522136 KDM5AP29375 1690 aaKnown RBP19.15■□□□□ 0.66
CLK4-210ENST00000522136 SENP3Q9H4L4 574 aaPredicted RBP19.14■□□□□ 0.65
CLK4-210ENST00000522136 UHRF1BP1Q6BDS2 1440 aa19.13■□□□□ 0.65
CLK4-210ENST00000522136 PRAG1Q86YV5 1406 aa19.13■□□□□ 0.65
CLK4-210ENST00000522136 RIMS2Q9UQ26 1411 aa19.13■□□□□ 0.65
CLK4-210ENST00000522136 ZNF142P52746 1687 aaPredicted RBP19.12■□□□□ 0.65
CLK4-210ENST00000522136 THEMISQ8N1K5 641 aaPredicted RBP19.12■□□□□ 0.65
CLK4-210ENST00000522136 TMEM2Q9UHN6 1383 aa19.11■□□□□ 0.65
CLK4-210ENST00000522136 MYOM2P54296 1465 aa19.11■□□□□ 0.65
CLK4-210ENST00000522136 STAC3Q96MF2 364 aa19.11■□□□□ 0.65
CLK4-210ENST00000522136 ZFYVE9O95405 1425 aa19.11■□□□□ 0.65
CLK4-210ENST00000522136 VGFO15240 615 aaPredicted RBP19.1■□□□□ 0.65
CLK4-210ENST00000522136 NRXN1Q9ULB1 1477 aa19.08■□□□□ 0.64
CLK4-210ENST00000522136 LTKP29376 864 aa19.08■□□□□ 0.64
CLK4-210ENST00000522136 NBPF1Q3BBV0 1214 aa19.06■□□□□ 0.64
CLK4-210ENST00000522136 TXNDC2Q86VQ3 553 aa19.06■□□□□ 0.64
CLK4-210ENST00000522136 TRPM1Q7Z4N2 1603 aa19.06■□□□□ 0.64
CLK4-210ENST00000522136 SLIT1O75093 1534 aa19.06■□□□□ 0.64
CLK4-210ENST00000522136 CFAP70Q5T0N1 1121 aa19.06■□□□□ 0.64
CLK4-210ENST00000522136 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.06■□□□□ 0.64
CLK4-210ENST00000522136 ARHGAP23Q9P227 1491 aa19.06■□□□□ 0.64
CLK4-210ENST00000522136 PIK3C2GO75747 1445 aa19.05■□□□□ 0.64
CLK4-210ENST00000522136 HDGFP51858 240 aaKnown RBP19.04■□□□□ 0.64
CLK4-210ENST00000522136 RALGAPBQ86X10 1494 aa19.03■□□□□ 0.64
CLK4-210ENST00000522136 EID1Q9Y6B2 187 aa19.03■□□□□ 0.64
CLK4-210ENST00000522136 ROCK2O75116 1388 aaKnown RBP19.02■□□□□ 0.64
CLK4-210ENST00000522136 C14orf93Q9H972 538 aaKnown RBP19.01■□□□□ 0.63
CLK4-210ENST00000522136 HSPA2P54652 639 aa19.01■□□□□ 0.63
CLK4-210ENST00000522136 BCANQ96GW7 911 aa19■□□□□ 0.63
CLK4-210ENST00000522136 CARD11Q9BXL7 1154 aa18.99■□□□□ 0.63
CLK4-210ENST00000522136 KIAA1210Q9ULL0 1709 aa18.99■□□□□ 0.63
CLK4-210ENST00000522136 LMTK3Q96Q04 1460 aa18.99■□□□□ 0.63
CLK4-210ENST00000522136 SCAF11Q99590 1463 aaKnown RBP18.99■□□□□ 0.63
CLK4-210ENST00000522136 ANKLE2Q86XL3 938 aa18.99■□□□□ 0.63
CLK4-210ENST00000522136 TMEM132EQ6IEE7 984 aa18.98■□□□□ 0.63
CLK4-210ENST00000522136 NRXN3Q9Y4C0 1643 aa18.98■□□□□ 0.63
CLK4-210ENST00000522136 IQGAP1P46940 1657 aa18.97■□□□□ 0.63
CLK4-210ENST00000522136 PLEKHG1Q9ULL1 1385 aa18.97■□□□□ 0.63
CLK4-210ENST00000522136 ALKQ9UM73 1620 aa18.97■□□□□ 0.63
CLK4-210ENST00000522136 HIRIP3Q9BW71 556 aaPredicted RBP18.97■□□□□ 0.63
CLK4-210ENST00000522136 NCKAP5LQ9HCH0 1330 aa18.97■□□□□ 0.63
CLK4-210ENST00000522136 GPRASP1Q5JY77 1395 aa18.96■□□□□ 0.63
CLK4-210ENST00000522136 SETBP1Q9Y6X0 1596 aa18.95■□□□□ 0.62
CLK4-210ENST00000522136 SLC26A8Q96RN1 970 aa18.95■□□□□ 0.62
CLK4-210ENST00000522136 LAMC1P11047 1609 aa18.94■□□□□ 0.62
CLK4-210ENST00000522136 ADAMTS13Q76LX8 1427 aa18.93■□□□□ 0.62
CLK4-210ENST00000522136 SETD1AO15047 1707 aaKnown RBP18.93■□□□□ 0.62
CLK4-210ENST00000522136 ADGRB1O14514 1584 aa18.93■□□□□ 0.62
CLK4-210ENST00000522136 ASXL1Q8IXJ9 1541 aa18.93■□□□□ 0.62
CLK4-210ENST00000522136 HSPA5P11021 654 aaKnown RBP18.93■□□□□ 0.62
CLK4-210ENST00000522136 POLR1AO95602 1720 aaPredicted RBP18.92■□□□□ 0.62
CLK4-210ENST00000522136 EIF4G2P78344 907 aaKnown RBP eCLIP18.92■□□□□ 0.62
CLK4-210ENST00000522136 USP47Q96K76 1375 aa18.92■□□□□ 0.62
CLK4-210ENST00000522136 METP08581 1390 aa18.91■□□□□ 0.62
CLK4-210ENST00000522136 STK26Q9P289 416 aa18.9■□□□□ 0.62
CLK4-210ENST00000522136 MED14O60244 1454 aa18.89■□□□□ 0.61
CLK4-210ENST00000522136 TRAK1Q9UPV9 953 aa18.89■□□□□ 0.61
CLK4-210ENST00000522136 NPHP4O75161 1426 aaPredicted RBP18.89■□□□□ 0.61
CLK4-210ENST00000522136 TBX22Q9Y458 520 aa18.88■□□□□ 0.61
CLK4-210ENST00000522136 ST20-MTHFSA0A0A6YYL1 179 aa18.86■□□□□ 0.61
CLK4-210ENST00000522136 STRCQ7RTU9 1775 aa18.86■□□□□ 0.61
CLK4-210ENST00000522136 YTHDC2Q9H6S0 1430 aaKnown RBP18.86■□□□□ 0.61
CLK4-210ENST00000522136 ZNF316A6NFI3 1004 aaPredicted RBP18.84■□□□□ 0.61
CLK4-210ENST00000522136 DIP2AQ14689 1571 aa18.83■□□□□ 0.6
CLK4-210ENST00000522136 PTPRUQ92729 1446 aa18.82■□□□□ 0.6
CLK4-210ENST00000522136 LRPPRCP42704 1394 aaKnown RBP18.82■□□□□ 0.6
CLK4-210ENST00000522136 ARHGEF28Q8N1W1 1705 aaKnown RBP18.81■□□□□ 0.6
CLK4-210ENST00000522136 AMOTL2Q9Y2J4 779 aa18.79■□□□□ 0.6
CLK4-210ENST00000522136 ABCC11Q96J66 1382 aa18.79■□□□□ 0.6
CLK4-210ENST00000522136 SAFB2Q14151 953 aaKnown RBP eCLIP18.79■□□□□ 0.6
CLK4-210ENST00000522136 EIF3AQ14152 1382 aaKnown RBP18.78■□□□□ 0.6
CLK4-210ENST00000522136 C11orf95C9JLR9 678 aaPredicted RBP18.78■□□□□ 0.6
CLK4-210ENST00000522136 WAPLQ7Z5K2 1190 aa18.78■□□□□ 0.6
CLK4-210ENST00000522136 PRAM1Q96QH2 718 aa18.78■□□□□ 0.6
CLK4-210ENST00000522136 TESK2Q96S53 571 aa18.78■□□□□ 0.6
CLK4-210ENST00000522136 CENPJQ9HC77 1338 aaPredicted RBP18.77■□□□□ 0.6
CLK4-210ENST00000522136 CHD2O14647 1828 aaKnown RBP18.77■□□□□ 0.59
CLK4-210ENST00000522136 KNDC1Q76NI1 1749 aa18.76■□□□□ 0.59
CLK4-210ENST00000522136 PIK3R4Q99570 1358 aa18.75■□□□□ 0.59
CLK4-210ENST00000522136 ROBO2Q9HCK4 1378 aa18.75■□□□□ 0.59
CLK4-210ENST00000522136 PLEKHH1Q9ULM0 1364 aa18.75■□□□□ 0.59
CLK4-210ENST00000522136 KCNA6P17658 529 aa18.75■□□□□ 0.59
CLK4-210ENST00000522136 POGKQ9P215 609 aa18.75■□□□□ 0.59
CLK4-210ENST00000522136 QRICH2Q9H0J4 1663 aa18.75■□□□□ 0.59
CLK4-210ENST00000522136 DLC1Q96QB1 1528 aa18.75■□□□□ 0.59
CLK4-210ENST00000522136 TECPR2O15040 1411 aa18.74■□□□□ 0.59
CLK4-210ENST00000522136 XRN1Q8IZH2 1706 aaKnown RBP18.74■□□□□ 0.59
CLK4-210ENST00000522136 CPS1P31327 1500 aa18.73■□□□□ 0.59
CLK4-210ENST00000522136 MINK1Q8N4C8 1332 aaPredicted RBP18.71■□□□□ 0.59
CLK4-210ENST00000522136 SIRT1Q96EB6 747 aa18.71■□□□□ 0.59
CLK4-210ENST00000522136 DISP3Q9P2K9 1392 aa18.71■□□□□ 0.59
CLK4-210ENST00000522136 WASHC2AQ641Q2 1341 aa18.7■□□□□ 0.58
CLK4-210ENST00000522136 FAM135BQ49AJ0 1406 aa18.7■□□□□ 0.58
CLK4-210ENST00000522136 RBM33Q96EV2 1170 aaKnown RBP18.69■□□□□ 0.58
CLK4-210ENST00000522136 POLR3GLQ9BT43 218 aa18.69■□□□□ 0.58
CLK4-210ENST00000522136 STRCP1A6NGW2 1772 aa18.69■□□□□ 0.58
CLK4-210ENST00000522136 KIF7Q2M1P5 1343 aa18.69■□□□□ 0.58
CLK4-210ENST00000522136 TMF1P82094 1093 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms