RNA–Protein interactions for RNA: ENST00000522130.1

MSR1-213, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 3

Gene MSR1, Length 489 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-213ENST00000522130 HCSTQ9UBK5 93 aa11.72□□□□□ -0.53
MSR1-213ENST00000522130 SLC4A3P48751 1232 aa11.7□□□□□ -0.54
MSR1-213ENST00000522130 RNF40O75150 1001 aa11.69□□□□□ -0.54
MSR1-213ENST00000522130 SLF2Q8IX21 1173 aa11.69□□□□□ -0.54
MSR1-213ENST00000522130 NLRP7Q8WX94 980 aa11.69□□□□□ -0.54
MSR1-213ENST00000522130 TSR3Q9UJK0 312 aaKnown RBP11.69□□□□□ -0.54
MSR1-213ENST00000522130 HPS5Q9UPZ3 1129 aa11.69□□□□□ -0.54
MSR1-213ENST00000522130 AK7Q96M32 723 aa11.67□□□□□ -0.54
MSR1-213ENST00000522130 PPP4CP60510 307 aa11.66□□□□□ -0.54
MSR1-213ENST00000522130 SLC24A3Q9HC58 644 aa11.66□□□□□ -0.54
MSR1-213ENST00000522130 WBP1LQ9NX94 342 aa11.66□□□□□ -0.54
MSR1-213ENST00000522130 DAXXQ9UER7 740 aaPredicted RBP11.66□□□□□ -0.54
MSR1-213ENST00000522130 NECTIN2Q92692 538 aa11.64□□□□□ -0.55
MSR1-213ENST00000522130 MDM2Q00987 491 aaPredicted RBP11.63□□□□□ -0.55
MSR1-213ENST00000522130 NYAP1Q6ZVC0 841 aa11.63□□□□□ -0.55
MSR1-213ENST00000522130 TPRNQ4KMQ1 711 aa11.62□□□□□ -0.55
MSR1-213ENST00000522130 TRIM66O15016 1216 aa11.61□□□□□ -0.55
MSR1-213ENST00000522130 CLCN1P35523 988 aa11.6□□□□□ -0.55
MSR1-213ENST00000522130 AMHR2Q16671 573 aa11.6□□□□□ -0.55
MSR1-213ENST00000522130 RSPH4AQ5TD94 716 aa11.6□□□□□ -0.55
MSR1-213ENST00000522130 DDX11L8A8MPP1 907 aa11.59□□□□□ -0.55
MSR1-213ENST00000522130 SULF1Q8IWU6 871 aa11.59□□□□□ -0.55
MSR1-213ENST00000522130 GPCPD1Q9NPB8 672 aa11.59□□□□□ -0.55
MSR1-213ENST00000522130 SLC10A3P09131 477 aa11.58□□□□□ -0.56
MSR1-213ENST00000522130 TTLL12Q14166 644 aaPredicted RBP11.57□□□□□ -0.56
MSR1-213ENST00000522130 RDH13Q8NBN7 331 aa11.56□□□□□ -0.56
MSR1-213ENST00000522130 TMUB1Q9BVT8 246 aa11.56□□□□□ -0.56
MSR1-213ENST00000522130 APLP1P51693 650 aa11.55□□□□□ -0.56
MSR1-213ENST00000522130 PRR14Q9BWN1 585 aa11.55□□□□□ -0.56
MSR1-213ENST00000522130 CFHP08603 1231 aa11.54□□□□□ -0.56
MSR1-213ENST00000522130 REPIN1Q9BWE0 567 aaKnown RBP11.54□□□□□ -0.56
MSR1-213ENST00000522130 PDE4DQ08499 809 aa11.53□□□□□ -0.56
MSR1-213ENST00000522130 KMT5BQ4FZB7 885 aa11.53□□□□□ -0.56
MSR1-213ENST00000522130 PARP9Q8IXQ6 854 aa11.52□□□□□ -0.57
MSR1-213ENST00000522130 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
MSR1-213ENST00000522130 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
MSR1-213ENST00000522130 CD46P15529 392 aa11.5□□□□□ -0.57
MSR1-213ENST00000522130 SSTR3P32745 418 aaPredicted RBP11.49□□□□□ -0.57
MSR1-213ENST00000522130 GCGRP47871 477 aa11.49□□□□□ -0.57
MSR1-213ENST00000522130 ACTN4O43707 911 aaKnown RBP11.48□□□□□ -0.57
MSR1-213ENST00000522130 PRKCSHP14314 528 aaPredicted RBP11.47□□□□□ -0.57
MSR1-213ENST00000522130 PCDHB3Q9Y5E6 796 aa11.46□□□□□ -0.57
MSR1-213ENST00000522130 MTRQ99707 1265 aa11.45□□□□□ -0.58
MSR1-213ENST00000522130 PLA2G2EQ9NZK7 142 aa11.45□□□□□ -0.58
MSR1-213ENST00000522130 ITGBL1O95965 494 aaPredicted RBP11.44□□□□□ -0.58
MSR1-213ENST00000522130 TJAP1Q5JTD0 557 aa11.44□□□□□ -0.58
MSR1-213ENST00000522130 COPS2P61201 443 aa11.43□□□□□ -0.58
MSR1-213ENST00000522130 KDM4AO75164 1064 aa11.42□□□□□ -0.58
MSR1-213ENST00000522130 MS4A1P11836 297 aa11.42□□□□□ -0.58
MSR1-213ENST00000522130 KCNC4Q03721 635 aa11.42□□□□□ -0.58
MSR1-213ENST00000522130 FUT2Q10981 343 aa11.42□□□□□ -0.58
MSR1-213ENST00000522130 IL21Q9HBE4 155 aa11.42□□□□□ -0.58
MSR1-213ENST00000522130 BLOC1S3Q6QNY0 202 aa11.41□□□□□ -0.58
MSR1-213ENST00000522130 ATP6V1AP38606 617 aa11.4□□□□□ -0.58
MSR1-213ENST00000522130 BEGAINQ9BUH8 593 aa11.4□□□□□ -0.58
MSR1-213ENST00000522130 PUS10Q3MIT2 529 aaKnown RBP11.39□□□□□ -0.59
MSR1-213ENST00000522130 GRIPAP1Q4V328 841 aa11.39□□□□□ -0.59
MSR1-213ENST00000522130 NUTM1Q86Y26 1132 aa11.39□□□□□ -0.59
MSR1-213ENST00000522130 GPBP1L1Q9HC44 474 aaPredicted RBP11.39□□□□□ -0.59
MSR1-213ENST00000522130 NR1I2O75469 434 aa11.38□□□□□ -0.59
MSR1-213ENST00000522130 USP46P62068 366 aa11.38□□□□□ -0.59
MSR1-213ENST00000522130 IFFO2Q5TF58 517 aa11.38□□□□□ -0.59
MSR1-213ENST00000522130 ZNF516Q92618 1163 aa11.38□□□□□ -0.59
MSR1-213ENST00000522130 MORN1Q5T089 497 aa11.37□□□□□ -0.59
MSR1-213ENST00000522130 KDM4CQ9H3R0 1056 aa11.37□□□□□ -0.59
MSR1-213ENST00000522130 ZPR1O75312 459 aa11.36□□□□□ -0.59
MSR1-213ENST00000522130 NEUROD2Q15784 382 aa11.35□□□□□ -0.59
MSR1-213ENST00000522130 SCUBE3Q8IX30 993 aa11.35□□□□□ -0.59
MSR1-213ENST00000522130 SPIRE2Q8WWL2 714 aa11.34□□□□□ -0.59
MSR1-213ENST00000522130 HOXA2O43364 376 aa11.33□□□□□ -0.6
MSR1-213ENST00000522130 SLC27A5Q9Y2P5 690 aa11.33□□□□□ -0.6
MSR1-213ENST00000522130 DIXDC1Q155Q3 683 aa11.32□□□□□ -0.6
MSR1-213ENST00000522130 BRPF1P55201 1214 aaPredicted RBP11.31□□□□□ -0.6
MSR1-213ENST00000522130 TBC1D2Q9BYX2 928 aa11.31□□□□□ -0.6
MSR1-213ENST00000522130 NKX2-3Q8TAU0 364 aa11.3□□□□□ -0.6
MSR1-213ENST00000522130 HLA-CQ95604 372 aa11.3□□□□□ -0.6
MSR1-213ENST00000522130 TLL1O43897 1013 aa11.29□□□□□ -0.6
MSR1-213ENST00000522130 FAM117AQ9C073 453 aa11.29□□□□□ -0.6
MSR1-213ENST00000522130 Q3C1V9 767 aa11.28□□□□□ -0.6
MSR1-213ENST00000522130 DDRGK1Q96HY6 314 aa11.28□□□□□ -0.6
MSR1-213ENST00000522130 MOXD2PA6NHM9 499 aa11.27□□□□□ -0.61
MSR1-213ENST00000522130 FMNL1O95466 1100 aaPredicted RBP11.27□□□□□ -0.61
MSR1-213ENST00000522130 GUCA2AQ02747 115 aa11.27□□□□□ -0.61
MSR1-213ENST00000522130 SALL2Q9Y467 1007 aaPredicted RBP11.27□□□□□ -0.61
MSR1-213ENST00000522130 A0A0G2JS52 829 aa11.26□□□□□ -0.61
MSR1-213ENST00000522130 ADH1BP00325 375 aa11.26□□□□□ -0.61
MSR1-213ENST00000522130 FDX1P10109 184 aa11.26□□□□□ -0.61
MSR1-213ENST00000522130 NDUFV2P19404 249 aa11.26□□□□□ -0.61
MSR1-213ENST00000522130 BRICD5Q6PL45 260 aa11.26□□□□□ -0.61
MSR1-213ENST00000522130 THAP11Q96EK4 314 aa11.26□□□□□ -0.61
MSR1-213ENST00000522130 SPSB2Q99619 263 aa11.26□□□□□ -0.61
MSR1-213ENST00000522130 MYSM1Q5VVJ2 828 aa11.24□□□□□ -0.61
MSR1-213ENST00000522130 RNF19BQ6ZMZ0 732 aa11.24□□□□□ -0.61
MSR1-213ENST00000522130 RSPH6AQ9H0K4 717 aa11.24□□□□□ -0.61
MSR1-213ENST00000522130 GJA5P36382 358 aa11.23□□□□□ -0.61
MSR1-213ENST00000522130 PCDHGC3Q9UN70 934 aa11.23□□□□□ -0.61
MSR1-213ENST00000522130 PLEKHG3A1L390 1219 aa11.22□□□□□ -0.61
MSR1-213ENST00000522130 RSBN1LQ6PCB5 846 aaPredicted RBP11.22□□□□□ -0.61
MSR1-213ENST00000522130 RIC3Q7Z5B4 369 aa11.22□□□□□ -0.61
MSR1-213ENST00000522130 SPTLC1O15269 473 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms