RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 CEBPAP49715 358 aaPredicted RBP38.23■■■■□ 3.71
TRNP1-201ENST00000522111 DDX10Q13206 875 aaKnown RBP38.23■■■■□ 3.71
TRNP1-201ENST00000522111 PLPPR3Q6T4P5 718 aa38.23■■■■□ 3.71
TRNP1-201ENST00000522111 STAG3Q9UJ98 1225 aa38.23■■■■□ 3.71
TRNP1-201ENST00000522111 NEXMIFQ5QGS0 1516 aa38.23■■■■□ 3.71
TRNP1-201ENST00000522111 RPGRIP1LQ68CZ1 1315 aa38.22■■■■□ 3.71
TRNP1-201ENST00000522111 LAMC1P11047 1609 aa38.21■■■■□ 3.71
TRNP1-201ENST00000522111 NRXN1Q9ULB1 1477 aa38.2■■■■□ 3.71
TRNP1-201ENST00000522111 C3P01024 1663 aa38.2■■■■□ 3.71
TRNP1-201ENST00000522111 TNRQ92752 1358 aa38.18■■■■□ 3.7
TRNP1-201ENST00000522111 WASHC2AQ641Q2 1341 aa38.18■■■■□ 3.7
TRNP1-201ENST00000522111 C11orf95C9JLR9 678 aaPredicted RBP38.17■■■■□ 3.7
TRNP1-201ENST00000522111 CFAP70Q5T0N1 1121 aa38.17■■■■□ 3.7
TRNP1-201ENST00000522111 ST20-MTHFSA0A0A6YYL1 179 aa38.16■■■■□ 3.7
TRNP1-201ENST00000522111 KIAA1210Q9ULL0 1709 aa38.16■■■■□ 3.7
TRNP1-201ENST00000522111 PIK3C2GO75747 1445 aa38.13■■■■□ 3.7
TRNP1-201ENST00000522111 A2ML1A8K2U0 1454 aa38.11■■■■□ 3.69
TRNP1-201ENST00000522111 SENP3Q9H4L4 574 aaPredicted RBP38.11■■■■□ 3.69
TRNP1-201ENST00000522111 VGFO15240 615 aaPredicted RBP38.1■■■■□ 3.69
TRNP1-201ENST00000522111 RIMS1Q86UR5 1692 aaKnown RBP38.08■■■■□ 3.69
TRNP1-201ENST00000522111 POLR1AO95602 1720 aaPredicted RBP38.08■■■■□ 3.69
TRNP1-201ENST00000522111 CCDC7Q96M83 1385 aa38.07■■■■□ 3.69
TRNP1-201ENST00000522111 IQGAP1P46940 1657 aa38.07■■■■□ 3.68
TRNP1-201ENST00000522111 MIER1Q8N108 512 aa38.05■■■■□ 3.68
TRNP1-201ENST00000522111 KIF7Q2M1P5 1343 aa38.04■■■■□ 3.68
TRNP1-201ENST00000522111 SCAF11Q99590 1463 aaKnown RBP38.01■■■■□ 3.68
TRNP1-201ENST00000522111 ZFYVE9O95405 1425 aa38■■■■□ 3.67
TRNP1-201ENST00000522111 POLR3GLQ9BT43 218 aa38■■■■□ 3.67
TRNP1-201ENST00000522111 C14orf93Q9H972 538 aaKnown RBP38■■■■□ 3.67
TRNP1-201ENST00000522111 ADAMTSL3P82987 1691 aa38■■■■□ 3.67
TRNP1-201ENST00000522111 UBR1Q8IWV7 1749 aa37.98■■■■□ 3.67
TRNP1-201ENST00000522111 RIMS2Q9UQ26 1411 aa37.97■■■■□ 3.67
TRNP1-201ENST00000522111 SETBP1Q9Y6X0 1596 aa37.95■■■■□ 3.67
TRNP1-201ENST00000522111 TMEM132EQ6IEE7 984 aa37.95■■■■□ 3.67
TRNP1-201ENST00000522111 NLRP1Q9C000 1473 aa37.95■■■■□ 3.67
TRNP1-201ENST00000522111 ADGRB1O14514 1584 aa37.92■■■■□ 3.66
TRNP1-201ENST00000522111 KDM5AP29375 1690 aaKnown RBP37.92■■■■□ 3.66
TRNP1-201ENST00000522111 TESK2Q96S53 571 aa37.9■■■■□ 3.66
TRNP1-201ENST00000522111 EIF3AQ14152 1382 aaKnown RBP37.89■■■■□ 3.66
TRNP1-201ENST00000522111 MYO3AQ8NEV4 1616 aa37.87■■■■□ 3.65
TRNP1-201ENST00000522111 TRAK1Q9UPV9 953 aa37.84■■■■□ 3.65
TRNP1-201ENST00000522111 DISP3Q9P2K9 1392 aa37.83■■■■□ 3.65
TRNP1-201ENST00000522111 TMEM2Q9UHN6 1383 aa37.83■■■■□ 3.65
TRNP1-201ENST00000522111 ASXL1Q8IXJ9 1541 aa37.81■■■■□ 3.64
TRNP1-201ENST00000522111 ALKQ9UM73 1620 aa37.8■■■■□ 3.64
TRNP1-201ENST00000522111 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.8■■■■□ 3.64
TRNP1-201ENST00000522111 TMF1P82094 1093 aa37.77■■■■□ 3.64
TRNP1-201ENST00000522111 HDGFP51858 240 aaKnown RBP37.74■■■■□ 3.63
TRNP1-201ENST00000522111 STK26Q9P289 416 aa37.73■■■■□ 3.63
TRNP1-201ENST00000522111 NRXN3Q9Y4C0 1643 aa37.73■■■■□ 3.63
TRNP1-201ENST00000522111 CEP170BQ9Y4F5 1589 aaPredicted RBP37.72■■■■□ 3.63
TRNP1-201ENST00000522111 PTPRMP28827 1452 aa37.71■■■■□ 3.63
TRNP1-201ENST00000522111 BCANQ96GW7 911 aa37.7■■■■□ 3.63
TRNP1-201ENST00000522111 ARHGEF28Q8N1W1 1705 aaKnown RBP37.7■■■■□ 3.63
TRNP1-201ENST00000522111 CENPJQ9HC77 1338 aaPredicted RBP37.69■■■■□ 3.62
TRNP1-201ENST00000522111 SETD1AO15047 1707 aaKnown RBP37.69■■■■□ 3.62
TRNP1-201ENST00000522111 ANP32CO43423 234 aa37.68■■■■□ 3.62
TRNP1-201ENST00000522111 LTKP29376 864 aa37.68■■■■□ 3.62
TRNP1-201ENST00000522111 QRICH2Q9H0J4 1663 aa37.68■■■■□ 3.62
TRNP1-201ENST00000522111 TXNDC2Q86VQ3 553 aa37.66■■■■□ 3.62
TRNP1-201ENST00000522111 THEMISQ8N1K5 641 aaPredicted RBP37.66■■■■□ 3.62
TRNP1-201ENST00000522111 YTHDC2Q9H6S0 1430 aaKnown RBP37.65■■■■□ 3.62
TRNP1-201ENST00000522111 SLIT1O75093 1534 aa37.65■■■■□ 3.62
TRNP1-201ENST00000522111 EID1Q9Y6B2 187 aa37.62■■■■□ 3.61
TRNP1-201ENST00000522111 ARHGAP23Q9P227 1491 aa37.62■■■■□ 3.61
TRNP1-201ENST00000522111 SAFB2Q14151 953 aaKnown RBP eCLIP37.59■■■■□ 3.61
TRNP1-201ENST00000522111 ZNF142P52746 1687 aaPredicted RBP37.59■■■■□ 3.61
TRNP1-201ENST00000522111 SETD1BQ9UPS6 1966 aaKnown RBP37.58■■■■□ 3.61
TRNP1-201ENST00000522111 METP08581 1390 aa37.57■■■■□ 3.6
TRNP1-201ENST00000522111 PLEKHG1Q9ULL1 1385 aa37.57■■■■□ 3.6
TRNP1-201ENST00000522111 SBNO2Q9Y2G9 1366 aa37.56■■■■□ 3.6
TRNP1-201ENST00000522111 CDCA8Q53HL2 280 aa37.54■■■■□ 3.6
TRNP1-201ENST00000522111 ADAMTS13Q76LX8 1427 aa37.52■■■■□ 3.6
TRNP1-201ENST00000522111 CNGB1Q14028 1251 aaPredicted RBP37.52■■■■□ 3.6
TRNP1-201ENST00000522111 PRAM1Q96QH2 718 aa37.52■■■■□ 3.6
TRNP1-201ENST00000522111 SLC24A1O60721 1099 aa37.51■■■■□ 3.59
TRNP1-201ENST00000522111 LRPPRCP42704 1394 aaKnown RBP37.49■■■■□ 3.59
TRNP1-201ENST00000522111 SLC26A8Q96RN1 970 aa37.49■■■■□ 3.59
TRNP1-201ENST00000522111 POGKQ9P215 609 aa37.49■■■■□ 3.59
TRNP1-201ENST00000522111 MYOM1P52179 1685 aa37.46■■■■□ 3.59
TRNP1-201ENST00000522111 PANK3Q9H999 370 aa37.42■■■■□ 3.58
TRNP1-201ENST00000522111 TULP4Q9NRJ4 1543 aa37.42■■■■□ 3.58
TRNP1-201ENST00000522111 ABCC11Q96J66 1382 aa37.42■■■■□ 3.58
TRNP1-201ENST00000522111 YTHDC1Q96MU7 727 aaKnown RBP37.42■■■■□ 3.58
TRNP1-201ENST00000522111 PRKRIP1Q9H875 184 aaPredicted RBP37.42■■■■□ 3.58
TRNP1-201ENST00000522111 MINK1Q8N4C8 1332 aaPredicted RBP37.42■■■■□ 3.58
TRNP1-201ENST00000522111 WAPLQ7Z5K2 1190 aa37.41■■■■□ 3.58
TRNP1-201ENST00000522111 DLC1Q96QB1 1528 aa37.41■■■■□ 3.58
TRNP1-201ENST00000522111 MED14O60244 1454 aa37.39■■■■□ 3.58
TRNP1-201ENST00000522111 PLEKHH1Q9ULM0 1364 aa37.39■■■■□ 3.58
TRNP1-201ENST00000522111 EVC2Q86UK5 1308 aa37.37■■■■□ 3.57
TRNP1-201ENST00000522111 KNDC1Q76NI1 1749 aa37.37■■■■□ 3.57
TRNP1-201ENST00000522111 ANKLE2Q86XL3 938 aa37.36■■■■□ 3.57
TRNP1-201ENST00000522111 CCER2I3L3R5 266 aa37.33■■■■□ 3.57
TRNP1-201ENST00000522111 KDM4FA0A1W2PPD8 638 aa37.32■■■■□ 3.56
TRNP1-201ENST00000522111 CPS1P31327 1500 aa37.32■■■■□ 3.56
TRNP1-201ENST00000522111 TECPR2O15040 1411 aa37.31■■■■□ 3.56
TRNP1-201ENST00000522111 PER1O15534 1290 aaPredicted RBP37.31■■■■□ 3.56
TRNP1-201ENST00000522111 CABP2Q9NPB3 220 aa37.31■■■■□ 3.56
TRNP1-201ENST00000522111 DIP2AQ14689 1571 aa37.3■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms