RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 ZKSCAN1P17029 563 aaPredicted RBP13.91□□□□□ -0.18
LAMA4-219ENST00000522006 PRKRIP1Q9H875 184 aaPredicted RBP13.91□□□□□ -0.18
LAMA4-219ENST00000522006 FANCIQ9NVI1 1328 aa13.91□□□□□ -0.18
LAMA4-219ENST00000522006 BICD2Q8TD16 824 aa13.91□□□□□ -0.18
LAMA4-219ENST00000522006 FAM13BQ9NYF5 915 aa13.91□□□□□ -0.18
LAMA4-219ENST00000522006 DDX19BQ9UMR2 479 aa13.91□□□□□ -0.18
LAMA4-219ENST00000522006 HOMER1Q86YM7 354 aa13.9□□□□□ -0.18
LAMA4-219ENST00000522006 TEX35Q5T0J7 233 aa13.9□□□□□ -0.18
LAMA4-219ENST00000522006 WWC1Q8IX03 1113 aa13.9□□□□□ -0.18
LAMA4-219ENST00000522006 LRRFIP1Q32MZ4 808 aaKnown RBP13.9□□□□□ -0.18
LAMA4-219ENST00000522006 CHMP5Q9NZZ3 219 aa13.9□□□□□ -0.18
LAMA4-219ENST00000522006 UACAQ9BZF9 1416 aa13.9□□□□□ -0.18
LAMA4-219ENST00000522006 NGEFQ8N5V2 710 aa13.9□□□□□ -0.19
LAMA4-219ENST00000522006 EIF2S2P20042 333 aaKnown RBP13.89□□□□□ -0.19
LAMA4-219ENST00000522006 CPLX2Q6PUV4 134 aaKnown RBP13.89□□□□□ -0.19
LAMA4-219ENST00000522006 TDRD9Q8NDG6 1382 aaKnown RBP13.89□□□□□ -0.19
LAMA4-219ENST00000522006 IPO7O95373 1038 aaKnown RBP13.89□□□□□ -0.19
LAMA4-219ENST00000522006 IFIT2P09913 472 aaKnown RBP13.89□□□□□ -0.19
LAMA4-219ENST00000522006 DHX57Q6P158 1386 aaKnown RBP13.89□□□□□ -0.19
LAMA4-219ENST00000522006 ANKRD20A12PQ8NF67 263 aa13.89□□□□□ -0.19
LAMA4-219ENST00000522006 C9orf78Q9NZ63 289 aaPredicted RBP13.89□□□□□ -0.19
LAMA4-219ENST00000522006 USP47Q96K76 1375 aa13.89□□□□□ -0.19
LAMA4-219ENST00000522006 FBXW7Q969H0 707 aa13.89□□□□□ -0.19
LAMA4-219ENST00000522006 EVC2Q86UK5 1308 aa13.88□□□□□ -0.19
LAMA4-219ENST00000522006 RAD21O60216 631 aa13.88□□□□□ -0.19
LAMA4-219ENST00000522006 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.88□□□□□ -0.19
LAMA4-219ENST00000522006 AMOTL1Q8IY63 956 aa13.88□□□□□ -0.19
LAMA4-219ENST00000522006 CCDC47Q96A33 483 aaKnown RBP13.88□□□□□ -0.19
LAMA4-219ENST00000522006 RSPH4AQ5TD94 716 aa13.88□□□□□ -0.19
LAMA4-219ENST00000522006 APAF1O14727 1248 aa13.88□□□□□ -0.19
LAMA4-219ENST00000522006 NEXNQ0ZGT2 675 aa13.88□□□□□ -0.19
LAMA4-219ENST00000522006 HOOK1Q9UJC3 728 aaKnown RBP13.88□□□□□ -0.19
LAMA4-219ENST00000522006 CPLX1O14810 134 aa13.88□□□□□ -0.19
LAMA4-219ENST00000522006 TCEAL9Q9UHQ7 104 aa13.88□□□□□ -0.19
LAMA4-219ENST00000522006 NECTIN2Q92692 538 aa13.87□□□□□ -0.19
LAMA4-219ENST00000522006 DZIP1LQ8IYY4 767 aaKnown RBP13.87□□□□□ -0.19
LAMA4-219ENST00000522006 APPP05067 770 aa13.87□□□□□ -0.19
LAMA4-219ENST00000522006 TEFQ10587 303 aa13.87□□□□□ -0.19
LAMA4-219ENST00000522006 NOL10Q9BSC4 688 aaKnown RBP13.87□□□□□ -0.19
LAMA4-219ENST00000522006 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
LAMA4-219ENST00000522006 ROCK1Q13464 1354 aa13.87□□□□□ -0.19
LAMA4-219ENST00000522006 SASS6Q6UVJ0 657 aa13.86□□□□□ -0.19
LAMA4-219ENST00000522006 VPS37CA5D8V6 355 aaPredicted RBP13.86□□□□□ -0.19
LAMA4-219ENST00000522006 TTC5Q8N0Z6 440 aa13.86□□□□□ -0.19
LAMA4-219ENST00000522006 FOSBP53539 338 aa13.86□□□□□ -0.19
LAMA4-219ENST00000522006 RNF20Q5VTR2 975 aa13.85□□□□□ -0.19
LAMA4-219ENST00000522006 TRIM34Q9BYJ4 488 aa13.85□□□□□ -0.19
LAMA4-219ENST00000522006 INTS3Q68E01 1043 aaKnown RBP13.85□□□□□ -0.19
LAMA4-219ENST00000522006 SMC3Q9UQE7 1217 aa13.85□□□□□ -0.19
LAMA4-219ENST00000522006 NFXL1Q6ZNB6 911 aa13.85□□□□□ -0.19
LAMA4-219ENST00000522006 FAM43AQ8N2R8 423 aa13.84□□□□□ -0.19
LAMA4-219ENST00000522006 API5Q9BZZ5 524 aaKnown RBP13.84□□□□□ -0.19
LAMA4-219ENST00000522006 PDS5BQ9NTI5 1447 aa13.84□□□□□ -0.19
LAMA4-219ENST00000522006 RIPK4P57078 832 aa13.84□□□□□ -0.19
LAMA4-219ENST00000522006 IFT57Q9NWB7 429 aa13.84□□□□□ -0.19
LAMA4-219ENST00000522006 DIAPH1O60610 1272 aaKnown RBP13.84□□□□□ -0.19
LAMA4-219ENST00000522006 NUCB2P80303 420 aa13.83□□□□□ -0.2
LAMA4-219ENST00000522006 TRDNQ13061 729 aa13.83□□□□□ -0.2
LAMA4-219ENST00000522006 SMARCA2P51531 1590 aa13.83□□□□□ -0.2
LAMA4-219ENST00000522006 DHX16O60231 1041 aaKnown RBP13.83□□□□□ -0.2
LAMA4-219ENST00000522006 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
LAMA4-219ENST00000522006 MINK1Q8N4C8 1332 aaPredicted RBP13.83□□□□□ -0.2
LAMA4-219ENST00000522006 RUFY1Q96T51 708 aa13.82□□□□□ -0.2
LAMA4-219ENST00000522006 EVA1CP58658 441 aa13.82□□□□□ -0.2
LAMA4-219ENST00000522006 G3BP1Q13283 466 aaKnown RBP eCLIP13.82□□□□□ -0.2
LAMA4-219ENST00000522006 AK7Q96M32 723 aa13.82□□□□□ -0.2
LAMA4-219ENST00000522006 CTDP1Q9Y5B0 961 aaPredicted RBP13.82□□□□□ -0.2
LAMA4-219ENST00000522006 ERICH2A1L162 156 aa13.81□□□□□ -0.2
LAMA4-219ENST00000522006 MNS1Q8NEH6 495 aa13.81□□□□□ -0.2
LAMA4-219ENST00000522006 C22orf23Q9BZE7 217 aa13.81□□□□□ -0.2
LAMA4-219ENST00000522006 ARGLU1Q9NWB6 273 aaPredicted RBP13.81□□□□□ -0.2
LAMA4-219ENST00000522006 NAP1L1P55209 391 aaKnown RBP13.81□□□□□ -0.2
LAMA4-219ENST00000522006 BCL11BQ9C0K0 894 aaPredicted RBP13.81□□□□□ -0.2
LAMA4-219ENST00000522006 FKBP5Q13451 457 aaPredicted RBP13.8□□□□□ -0.2
LAMA4-219ENST00000522006 CCDC73Q6ZRK6 1079 aa13.8□□□□□ -0.2
LAMA4-219ENST00000522006 VPS37DQ86XT2 251 aa13.8□□□□□ -0.2
LAMA4-219ENST00000522006 DDX58O95786 925 aaKnown RBP13.8□□□□□ -0.2
LAMA4-219ENST00000522006 VGFO15240 615 aaPredicted RBP13.8□□□□□ -0.2
LAMA4-219ENST00000522006 RUNDC1Q96C34 613 aa13.79□□□□□ -0.2
LAMA4-219ENST00000522006 LNPKQ9C0E8 428 aa13.79□□□□□ -0.2
LAMA4-219ENST00000522006 CCDC39Q9UFE4 941 aa13.79□□□□□ -0.2
LAMA4-219ENST00000522006 ACBD3Q9H3P7 528 aa13.79□□□□□ -0.2
LAMA4-219ENST00000522006 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.78□□□□□ -0.2
LAMA4-219ENST00000522006 ERC2O15083 957 aa13.78□□□□□ -0.2
LAMA4-219ENST00000522006 NFKBIBQ15653 356 aa13.78□□□□□ -0.2
LAMA4-219ENST00000522006 R3HCC1Q9Y3T6 440 aaKnown RBP13.78□□□□□ -0.2
LAMA4-219ENST00000522006 RRP12Q5JTH9 1297 aaKnown RBP13.77□□□□□ -0.2
LAMA4-219ENST00000522006 NOM1Q5C9Z4 860 aaKnown RBP13.77□□□□□ -0.2
LAMA4-219ENST00000522006 MSH5O43196 834 aa13.77□□□□□ -0.21
LAMA4-219ENST00000522006 CDR1P51861 262 aa13.77□□□□□ -0.21
LAMA4-219ENST00000522006 SAFBQ15424 915 aaKnown RBP eCLIP13.77□□□□□ -0.21
LAMA4-219ENST00000522006 NASPP49321 788 aaPredicted RBP13.76□□□□□ -0.21
LAMA4-219ENST00000522006 WIZO95785 1651 aa13.76□□□□□ -0.21
LAMA4-219ENST00000522006 OLFM4Q6UX06 510 aa13.76□□□□□ -0.21
LAMA4-219ENST00000522006 TOP2AP11388 1531 aaKnown RBP13.76□□□□□ -0.21
LAMA4-219ENST00000522006 TSPYL4Q9UJ04 414 aa13.76□□□□□ -0.21
LAMA4-219ENST00000522006 CDC45O75419 566 aa13.76□□□□□ -0.21
LAMA4-219ENST00000522006 PDILTQ8N807 584 aa13.76□□□□□ -0.21
LAMA4-219ENST00000522006 NAT10Q9H0A0 1025 aaKnown RBP13.76□□□□□ -0.21
LAMA4-219ENST00000522006 HSP90AB4PQ58FF6 505 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms