RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 CROCC2H7BZ55 1655 aa9.75□□□□□ -0.85
CTNNA1-228ENST00000521640 ADGBQ8N7X0 1667 aa9.75□□□□□ -0.85
CTNNA1-228ENST00000521640 ITGAEP38570 1179 aa9.75□□□□□ -0.85
CTNNA1-228ENST00000521640 PTPRGP23470 1445 aa9.74□□□□□ -0.85
CTNNA1-228ENST00000521640 DAPK1P53355 1430 aa9.74□□□□□ -0.85
CTNNA1-228ENST00000521640 ATP10BO94823 1461 aa9.74□□□□□ -0.85
CTNNA1-228ENST00000521640 ADGRL2O95490 1459 aa9.74□□□□□ -0.85
CTNNA1-228ENST00000521640 ABCC10Q5T3U5 1492 aa9.74□□□□□ -0.85
CTNNA1-228ENST00000521640 SHANK2Q9UPX8 1470 aa9.74□□□□□ -0.85
CTNNA1-228ENST00000521640 GPATCH8Q9UKJ3 1502 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-228ENST00000521640 UHRF1BP1LA0JNW5 1464 aa9.73□□□□□ -0.85
CTNNA1-228ENST00000521640 ABCC2Q92887 1545 aa9.73□□□□□ -0.85
CTNNA1-228ENST00000521640 ZNF710Q8N1W2 664 aa9.73□□□□□ -0.85
CTNNA1-228ENST00000521640 KHSRPQ92945 711 aaKnown RBP eCLIP9.73□□□□□ -0.85
CTNNA1-228ENST00000521640 CAMSAP2Q08AD1 1489 aa9.72□□□□□ -0.85
CTNNA1-228ENST00000521640 SLC34A2O95436 690 aa9.72□□□□□ -0.85
CTNNA1-228ENST00000521640 ARSIQ5FYB1 569 aa9.72□□□□□ -0.85
CTNNA1-228ENST00000521640 GPR153Q6NV75 609 aa9.72□□□□□ -0.85
CTNNA1-228ENST00000521640 MARVELD3Q96A59 401 aa9.72□□□□□ -0.85
CTNNA1-228ENST00000521640 CDC42BPAQ5VT25 1732 aa9.72□□□□□ -0.85
CTNNA1-228ENST00000521640 ABCC5O15440 1437 aa9.72□□□□□ -0.85
CTNNA1-228ENST00000521640 ARHGEF5Q12774 1597 aa9.71□□□□□ -0.85
CTNNA1-228ENST00000521640 HAP1P54257 671 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-228ENST00000521640 HOXB1P14653 301 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-228ENST00000521640 DIEXFQ68CQ4 756 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-228ENST00000521640 PCDHGA4Q9Y5G9 962 aa9.7□□□□□ -0.86
CTNNA1-228ENST00000521640 PREX2Q70Z35 1606 aa9.7□□□□□ -0.86
CTNNA1-228ENST00000521640 PLEKHD1A6NEE1 506 aa9.69□□□□□ -0.86
CTNNA1-228ENST00000521640 RIMBP2O15034 1052 aa9.69□□□□□ -0.86
CTNNA1-228ENST00000521640 ZSWIM6Q9HCJ5 1215 aa9.69□□□□□ -0.86
CTNNA1-228ENST00000521640 EMILIN3Q9NT22 766 aa9.69□□□□□ -0.86
CTNNA1-228ENST00000521640 PTCD2Q8WV60 388 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-228ENST00000521640 UPF1Q92900 1129 aaKnown RBP eCLIP9.68□□□□□ -0.86
CTNNA1-228ENST00000521640 POTEMA6NI47 508 aa9.67□□□□□ -0.86
CTNNA1-228ENST00000521640 POTEGQ6S5H5 508 aa9.67□□□□□ -0.86
CTNNA1-228ENST00000521640 OXER1Q8TDS5 423 aa9.67□□□□□ -0.86
CTNNA1-228ENST00000521640 KDM5BQ9UGL1 1544 aa9.66□□□□□ -0.86
CTNNA1-228ENST00000521640 PLEKHH2Q8IVE3 1493 aa9.66□□□□□ -0.86
CTNNA1-228ENST00000521640 CAMK2BQ13554 666 aa9.66□□□□□ -0.86
CTNNA1-228ENST00000521640 CFDP1Q9UEE9 299 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-228ENST00000521640 MAST1Q9Y2H9 1570 aa9.66□□□□□ -0.86
CTNNA1-228ENST00000521640 ARAP3Q8WWN8 1544 aa9.66□□□□□ -0.86
CTNNA1-228ENST00000521640 NCOA1Q15788 1441 aa9.65□□□□□ -0.86
CTNNA1-228ENST00000521640 NUDT7P0C024 238 aa9.65□□□□□ -0.86
CTNNA1-228ENST00000521640 RSPH4AQ5TD94 716 aa9.65□□□□□ -0.86
CTNNA1-228ENST00000521640 KDM5DQ9BY66 1539 aa9.65□□□□□ -0.86
CTNNA1-228ENST00000521640 ANKRD30AQ9BXX3 1397 aa9.64□□□□□ -0.87
CTNNA1-228ENST00000521640 KDM4FA0A1W2PPD8 638 aa9.64□□□□□ -0.87
CTNNA1-228ENST00000521640 POTEB3A0JP26 581 aa9.64□□□□□ -0.87
CTNNA1-228ENST00000521640 EMP3P54852 163 aa9.64□□□□□ -0.87
CTNNA1-228ENST00000521640 POTEBQ6S5H4 581 aa9.64□□□□□ -0.87
CTNNA1-228ENST00000521640 MYO5CQ9NQX4 1742 aa9.64□□□□□ -0.87
CTNNA1-228ENST00000521640 CDC42BPBQ9Y5S2 1711 aa9.64□□□□□ -0.87
CTNNA1-228ENST00000521640 KDM6BO15054 1643 aa9.64□□□□□ -0.87
CTNNA1-228ENST00000521640 KDM2AQ9Y2K7 1162 aa9.63□□□□□ -0.87
CTNNA1-228ENST00000521640 DENND4BO75064 1496 aaPredicted RBP9.63□□□□□ -0.87
CTNNA1-228ENST00000521640 KIAA1107Q9UPP5 1409 aa9.63□□□□□ -0.87
CTNNA1-228ENST00000521640 ZCCHC11Q5TAX3 1644 aaKnown RBP9.63□□□□□ -0.87
CTNNA1-228ENST00000521640 ERCC6L2Q5T890 1561 aa9.63□□□□□ -0.87
CTNNA1-228ENST00000521640 CCDC141Q6ZP82 1450 aa9.62□□□□□ -0.87
CTNNA1-228ENST00000521640 MBD5Q9P267 1494 aa9.62□□□□□ -0.87
CTNNA1-228ENST00000521640 WDR70Q9NW82 654 aa9.62□□□□□ -0.87
CTNNA1-228ENST00000521640 SAMD9LQ8IVG5 1584 aa9.62□□□□□ -0.87
CTNNA1-228ENST00000521640 TONSLQ96HA7 1378 aa9.62□□□□□ -0.87
CTNNA1-228ENST00000521640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.61□□□□□ -0.87
CTNNA1-228ENST00000521640 C9orf84Q5VXU9 1444 aa9.61□□□□□ -0.87
CTNNA1-228ENST00000521640 PLXNC1O60486 1568 aa9.61□□□□□ -0.87
CTNNA1-228ENST00000521640 TTC37Q6PGP7 1564 aa9.6□□□□□ -0.87
CTNNA1-228ENST00000521640 FAM205CA6NFA0 338 aa9.6□□□□□ -0.87
CTNNA1-228ENST00000521640 ARID3CA6NKF2 412 aa9.6□□□□□ -0.87
CTNNA1-228ENST00000521640 PPP1R15AO75807 674 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-228ENST00000521640 E2F4Q16254 413 aa9.6□□□□□ -0.87
CTNNA1-228ENST00000521640 DPYSL4O14531 572 aa9.59□□□□□ -0.87
CTNNA1-228ENST00000521640 RRP7BPQ9NSQ0 103 aa9.59□□□□□ -0.87
CTNNA1-228ENST00000521640 RPRD2Q5VT52 1461 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-228ENST00000521640 ZNF644Q9H582 1327 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-228ENST00000521640 ANKRD50Q9ULJ7 1429 aa9.58□□□□□ -0.88
CTNNA1-228ENST00000521640 TBC1D12O60347 775 aa9.58□□□□□ -0.88
CTNNA1-228ENST00000521640 HS3ST6Q96QI5 342 aa9.58□□□□□ -0.88
CTNNA1-228ENST00000521640 LHX6Q9UPM6 363 aa9.58□□□□□ -0.88
CTNNA1-228ENST00000521640 PZPP20742 1482 aa9.58□□□□□ -0.88
CTNNA1-228ENST00000521640 PLCH2O75038 1416 aa9.57□□□□□ -0.88
CTNNA1-228ENST00000521640 ARHGAP5Q13017 1502 aa9.57□□□□□ -0.88
CTNNA1-228ENST00000521640 SIN3AQ96ST3 1273 aa9.57□□□□□ -0.88
CTNNA1-228ENST00000521640 MPHOSPH9Q99550 1183 aa9.57□□□□□ -0.88
CTNNA1-228ENST00000521640 CHIC2Q9UKJ5 165 aa9.57□□□□□ -0.88
CTNNA1-228ENST00000521640 ANKRD30BQ9BXX2 1392 aa9.57□□□□□ -0.88
CTNNA1-228ENST00000521640 ERBB3P21860 1342 aa9.56□□□□□ -0.88
CTNNA1-228ENST00000521640 UNC13BO14795 1591 aa9.56□□□□□ -0.88
CTNNA1-228ENST00000521640 MAP3K9P80192 1104 aa9.56□□□□□ -0.88
CTNNA1-228ENST00000521640 VARS2Q5ST30 1063 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-228ENST00000521640 ABCC1P33527 1531 aa9.56□□□□□ -0.88
CTNNA1-228ENST00000521640 EVI5O60447 810 aa9.55□□□□□ -0.88
CTNNA1-228ENST00000521640 TSPY4P0CV99 314 aa9.55□□□□□ -0.88
CTNNA1-228ENST00000521640 TSPY10P0CW01 314 aa9.55□□□□□ -0.88
CTNNA1-228ENST00000521640 KCNV2Q8TDN2 545 aa9.55□□□□□ -0.88
CTNNA1-228ENST00000521640 ABCA9Q8IUA7 1624 aa9.55□□□□□ -0.88
CTNNA1-228ENST00000521640 SYCP2Q9BX26 1530 aa9.55□□□□□ -0.88
CTNNA1-228ENST00000521640 TEX14Q8IWB6 1497 aa9.54□□□□□ -0.88
CTNNA1-228ENST00000521640 WDR7Q9Y4E6 1490 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms