RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 NUTM2BA6NNL0 878 aaPredicted RBP16.59■□□□□ 0.25
MRPS28-208ENST00000521605 NUTM2EB1AL46 878 aaPredicted RBP16.59■□□□□ 0.25
MRPS28-208ENST00000521605 IDI1Q13907 227 aa16.59■□□□□ 0.25
MRPS28-208ENST00000521605 C14orf37Q86TY3 774 aa16.59■□□□□ 0.25
MRPS28-208ENST00000521605 NUTM2AQ8IVF1 878 aaPredicted RBP16.59■□□□□ 0.25
MRPS28-208ENST00000521605 PCGF6Q9BYE7 350 aa16.59■□□□□ 0.25
MRPS28-208ENST00000521605 FGD6Q6ZV73 1430 aa16.58■□□□□ 0.24
MRPS28-208ENST00000521605 KDM5AP29375 1690 aaKnown RBP16.57■□□□□ 0.24
MRPS28-208ENST00000521605 SHPRHQ149N8 1683 aa16.56■□□□□ 0.24
MRPS28-208ENST00000521605 KIF15Q9NS87 1388 aa16.54■□□□□ 0.24
MRPS28-208ENST00000521605 AFF2P51816 1311 aa16.54■□□□□ 0.24
MRPS28-208ENST00000521605 RRP7BPQ9NSQ0 103 aa16.54■□□□□ 0.24
MRPS28-208ENST00000521605 ADGRB3O60242 1522 aa16.54■□□□□ 0.24
MRPS28-208ENST00000521605 CDK12Q9NYV4 1490 aaPredicted RBP16.54■□□□□ 0.24
MRPS28-208ENST00000521605 KANK1Q14678 1352 aa16.53■□□□□ 0.24
MRPS28-208ENST00000521605 ADRA2BP18089 450 aa16.53■□□□□ 0.24
MRPS28-208ENST00000521605 AHDC1Q5TGY3 1603 aaPredicted RBP16.52■□□□□ 0.24
MRPS28-208ENST00000521605 ERBINQ96RT1 1412 aa16.52■□□□□ 0.23
MRPS28-208ENST00000521605 CHD2O14647 1828 aaKnown RBP16.52■□□□□ 0.23
MRPS28-208ENST00000521605 PPP1R15AO75807 674 aaPredicted RBP16.51■□□□□ 0.23
MRPS28-208ENST00000521605 NUTM2DQ5VT03 806 aaPredicted RBP16.51■□□□□ 0.23
MRPS28-208ENST00000521605 RGS12O14924 1447 aa16.51■□□□□ 0.23
MRPS28-208ENST00000521605 ATF3P18847 181 aa16.5■□□□□ 0.23
MRPS28-208ENST00000521605 APLP2Q06481 763 aa16.5■□□□□ 0.23
MRPS28-208ENST00000521605 MYOM3Q5VTT5 1437 aa16.49■□□□□ 0.23
MRPS28-208ENST00000521605 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.49■□□□□ 0.23
MRPS28-208ENST00000521605 CADPS2Q86UW7 1296 aa16.48■□□□□ 0.23
MRPS28-208ENST00000521605 DIP2AQ14689 1571 aa16.47■□□□□ 0.23
MRPS28-208ENST00000521605 C8orf37Q96NL8 207 aa16.47■□□□□ 0.23
MRPS28-208ENST00000521605 PLEKHG1Q9ULL1 1385 aa16.47■□□□□ 0.23
MRPS28-208ENST00000521605 QTRT2Q9H974 415 aaKnown RBP16.46■□□□□ 0.23
MRPS28-208ENST00000521605 CROCC2H7BZ55 1655 aa16.46■□□□□ 0.23
MRPS28-208ENST00000521605 NOS1P29475 1434 aa16.45■□□□□ 0.22
MRPS28-208ENST00000521605 BRINP3Q76B58 766 aa16.45■□□□□ 0.22
MRPS28-208ENST00000521605 C19orf44Q9H6X5 657 aa16.45■□□□□ 0.22
MRPS28-208ENST00000521605 MYO5BQ9ULV0 1848 aa16.45■□□□□ 0.22
MRPS28-208ENST00000521605 LMTK2Q8IWU2 1503 aa16.45■□□□□ 0.22
MRPS28-208ENST00000521605 ZFYVE9O95405 1425 aa16.45■□□□□ 0.22
MRPS28-208ENST00000521605 RBM6P78332 1123 aaKnown RBP16.44■□□□□ 0.22
MRPS28-208ENST00000521605 RIMS2Q9UQ26 1411 aa16.44■□□□□ 0.22
MRPS28-208ENST00000521605 NCOA3Q9Y6Q9 1424 aa16.44■□□□□ 0.22
MRPS28-208ENST00000521605 SLC52A1Q9NWF4 448 aa16.43■□□□□ 0.22
MRPS28-208ENST00000521605 ABCC5O15440 1437 aa16.43■□□□□ 0.22
MRPS28-208ENST00000521605 KANK4Q5T7N3 995 aaPredicted RBP16.42■□□□□ 0.22
MRPS28-208ENST00000521605 ZRANB1Q9UGI0 708 aa16.42■□□□□ 0.22
MRPS28-208ENST00000521605 TBX22Q9Y458 520 aa16.42■□□□□ 0.22
MRPS28-208ENST00000521605 GCC2Q8IWJ2 1684 aa16.42■□□□□ 0.22
MRPS28-208ENST00000521605 SETBP1Q9Y6X0 1596 aa16.41■□□□□ 0.22
MRPS28-208ENST00000521605 ASXL1Q8IXJ9 1541 aa16.4■□□□□ 0.22
MRPS28-208ENST00000521605 ATAD2Q6PL18 1390 aa16.4■□□□□ 0.22
MRPS28-208ENST00000521605 CHGAP10645 457 aaKnown RBP16.4■□□□□ 0.22
MRPS28-208ENST00000521605 HDGFP51858 240 aaKnown RBP16.4■□□□□ 0.22
MRPS28-208ENST00000521605 CHIC2Q9UKJ5 165 aa16.4■□□□□ 0.22
MRPS28-208ENST00000521605 SETD5Q9C0A6 1442 aa16.38■□□□□ 0.21
MRPS28-208ENST00000521605 ADAMTS2O95450 1211 aa16.38■□□□□ 0.21
MRPS28-208ENST00000521605 DDX17Q92841 729 aaKnown RBP16.38■□□□□ 0.21
MRPS28-208ENST00000521605 DAPK1P53355 1430 aa16.37■□□□□ 0.21
MRPS28-208ENST00000521605 ADAMTS13Q76LX8 1427 aa16.37■□□□□ 0.21
MRPS28-208ENST00000521605 LRRC59Q96AG4 307 aaKnown RBP16.37■□□□□ 0.21
MRPS28-208ENST00000521605 NGLY1Q96IV0 654 aa16.37■□□□□ 0.21
MRPS28-208ENST00000521605 TMEM131LA2VDJ0 1609 aa16.37■□□□□ 0.21
MRPS28-208ENST00000521605 AMOTL2Q9Y2J4 779 aa16.36■□□□□ 0.21
MRPS28-208ENST00000521605 NHSL1Q5SYE7 1610 aa16.36■□□□□ 0.21
MRPS28-208ENST00000521605 PTPN23Q9H3S7 1636 aa16.36■□□□□ 0.21
MRPS28-208ENST00000521605 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
MRPS28-208ENST00000521605 ANKRD30AQ9BXX3 1397 aa16.35■□□□□ 0.21
MRPS28-208ENST00000521605 HRCP23327 699 aa16.34■□□□□ 0.21
MRPS28-208ENST00000521605 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.34■□□□□ 0.21
MRPS28-208ENST00000521605 MST1RQ04912 1400 aa16.33■□□□□ 0.2
MRPS28-208ENST00000521605 PTPRUQ92729 1446 aa16.33■□□□□ 0.2
MRPS28-208ENST00000521605 TRPM2O94759 1503 aa16.32■□□□□ 0.2
MRPS28-208ENST00000521605 RPRD2Q5VT52 1461 aaKnown RBP16.32■□□□□ 0.2
MRPS28-208ENST00000521605 PIK3R4Q99570 1358 aa16.32■□□□□ 0.2
MRPS28-208ENST00000521605 RRBP1Q9P2E9 1410 aaKnown RBP16.32■□□□□ 0.2
MRPS28-208ENST00000521605 USP21Q9UK80 565 aa16.32■□□□□ 0.2
MRPS28-208ENST00000521605 DCCP43146 1447 aa16.31■□□□□ 0.2
MRPS28-208ENST00000521605 EP400Q96L91 3159 aa16.3■□□□□ 0.2
MRPS28-208ENST00000521605 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
MRPS28-208ENST00000521605 TRPC5Q9UL62 973 aaPredicted RBP16.28■□□□□ 0.2
MRPS28-208ENST00000521605 UNC13BO14795 1591 aa16.26■□□□□ 0.19
MRPS28-208ENST00000521605 ZEB1P37275 1124 aaPredicted RBP16.26■□□□□ 0.19
MRPS28-208ENST00000521605 XRN1Q8IZH2 1706 aaKnown RBP16.25■□□□□ 0.19
MRPS28-208ENST00000521605 CCDC125Q86Z20 511 aa16.23■□□□□ 0.19
MRPS28-208ENST00000521605 ATRNO75882 1429 aa16.22■□□□□ 0.19
MRPS28-208ENST00000521605 ANKRD50Q9ULJ7 1429 aa16.22■□□□□ 0.19
MRPS28-208ENST00000521605 NALCNQ8IZF0 1738 aa16.22■□□□□ 0.19
MRPS28-208ENST00000521605 ADGRL3Q9HAR2 1447 aa16.21■□□□□ 0.19
MRPS28-208ENST00000521605 FNBP4Q8N3X1 1017 aaPredicted RBP16.21■□□□□ 0.19
MRPS28-208ENST00000521605 E9PCH4 1651 aa16.21■□□□□ 0.18
MRPS28-208ENST00000521605 NRXN3Q9Y4C0 1643 aa16.2■□□□□ 0.18
MRPS28-208ENST00000521605 ADGRL2O95490 1459 aa16.19■□□□□ 0.18
MRPS28-208ENST00000521605 METP08581 1390 aa16.19■□□□□ 0.18
MRPS28-208ENST00000521605 PTCH1Q13635 1447 aa16.19■□□□□ 0.18
MRPS28-208ENST00000521605 C1orf167Q5SNV9 1468 aa16.18■□□□□ 0.18
MRPS28-208ENST00000521605 DEFB132Q7Z7B7 95 aa16.18■□□□□ 0.18
MRPS28-208ENST00000521605 ORAI2Q96SN7 254 aa16.17■□□□□ 0.18
MRPS28-208ENST00000521605 FAM50AQ14320 339 aaKnown RBP16.16■□□□□ 0.18
MRPS28-208ENST00000521605 SOS2Q07890 1332 aaPredicted RBP16.16■□□□□ 0.18
MRPS28-208ENST00000521605 BLMP54132 1417 aaPredicted RBP16.15■□□□□ 0.18
MRPS28-208ENST00000521605 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 234.6 ms