RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 RALGAPBQ86X10 1494 aa19.41■□□□□ 0.7
SPIDR-214ENST00000521550 ANKLE2Q86XL3 938 aa19.41■□□□□ 0.7
SPIDR-214ENST00000521550 IQGAP3Q86VI3 1631 aa19.4■□□□□ 0.7
SPIDR-214ENST00000521550 USP47Q96K76 1375 aa19.4■□□□□ 0.7
SPIDR-214ENST00000521550 ZNF335Q9H4Z2 1342 aaPredicted RBP19.39■□□□□ 0.7
SPIDR-214ENST00000521550 NEURL4Q96JN8 1562 aa19.39■□□□□ 0.69
SPIDR-214ENST00000521550 VWDEQ8N2E2 1590 aa19.38■□□□□ 0.69
SPIDR-214ENST00000521550 LMTK2Q8IWU2 1503 aa19.37■□□□□ 0.69
SPIDR-214ENST00000521550 UBR1Q8IWV7 1749 aa19.36■□□□□ 0.69
SPIDR-214ENST00000521550 IQSEC2Q5JU85 1478 aa19.36■□□□□ 0.69
SPIDR-214ENST00000521550 KIF7Q2M1P5 1343 aa19.35■□□□□ 0.69
SPIDR-214ENST00000521550 DCAF11Q8TEB1 546 aa19.35■□□□□ 0.69
SPIDR-214ENST00000521550 CARD11Q9BXL7 1154 aa19.35■□□□□ 0.69
SPIDR-214ENST00000521550 ROCK2O75116 1388 aaKnown RBP19.34■□□□□ 0.69
SPIDR-214ENST00000521550 MED14O60244 1454 aa19.33■□□□□ 0.69
SPIDR-214ENST00000521550 EFCAB6Q5THR3 1501 aa19.33■□□□□ 0.68
SPIDR-214ENST00000521550 C11orf95C9JLR9 678 aaPredicted RBP19.32■□□□□ 0.68
SPIDR-214ENST00000521550 NPHP4O75161 1426 aaPredicted RBP19.32■□□□□ 0.68
SPIDR-214ENST00000521550 KDM2AQ9Y2K7 1162 aa19.32■□□□□ 0.68
SPIDR-214ENST00000521550 IQGAP1P46940 1657 aa19.31■□□□□ 0.68
SPIDR-214ENST00000521550 PIK3C2BO00750 1634 aa19.31■□□□□ 0.68
SPIDR-214ENST00000521550 PRKRIP1Q9H875 184 aaPredicted RBP19.3■□□□□ 0.68
SPIDR-214ENST00000521550 STAG3Q9UJ98 1225 aa19.28■□□□□ 0.68
SPIDR-214ENST00000521550 TET3O43151 1660 aa19.28■□□□□ 0.68
SPIDR-214ENST00000521550 NEFLP07196 543 aa19.28■□□□□ 0.68
SPIDR-214ENST00000521550 SLIT1O75093 1534 aa19.27■□□□□ 0.68
SPIDR-214ENST00000521550 SYNMO15061 1565 aa19.27■□□□□ 0.68
SPIDR-214ENST00000521550 KDM5AP29375 1690 aaKnown RBP19.27■□□□□ 0.67
SPIDR-214ENST00000521550 NOS1P29475 1434 aa19.27■□□□□ 0.67
SPIDR-214ENST00000521550 SCAF11Q99590 1463 aaKnown RBP19.26■□□□□ 0.67
SPIDR-214ENST00000521550 IDI1Q13907 227 aa19.26■□□□□ 0.67
SPIDR-214ENST00000521550 ARHGAP23Q9P227 1491 aa19.26■□□□□ 0.67
SPIDR-214ENST00000521550 CPS1P31327 1500 aa19.26■□□□□ 0.67
SPIDR-214ENST00000521550 SUPT16HQ9Y5B9 1047 aaKnown RBP19.25■□□□□ 0.67
SPIDR-214ENST00000521550 TXNDC2Q86VQ3 553 aa19.25■□□□□ 0.67
SPIDR-214ENST00000521550 STAC3Q96MF2 364 aa19.25■□□□□ 0.67
SPIDR-214ENST00000521550 PRAG1Q86YV5 1406 aa19.25■□□□□ 0.67
SPIDR-214ENST00000521550 EID1Q9Y6B2 187 aa19.24■□□□□ 0.67
SPIDR-214ENST00000521550 LTKP29376 864 aa19.23■□□□□ 0.67
SPIDR-214ENST00000521550 SLC52A1Q9NWF4 448 aa19.23■□□□□ 0.67
SPIDR-214ENST00000521550 TMEM2Q9UHN6 1383 aa19.22■□□□□ 0.67
SPIDR-214ENST00000521550 UBAP1LF5GYI3 381 aa19.22■□□□□ 0.67
SPIDR-214ENST00000521550 HNRNPUQ00839 825 aaKnown RBP eCLIP19.22■□□□□ 0.67
SPIDR-214ENST00000521550 RGL3Q3MIN7 710 aa19.22■□□□□ 0.67
SPIDR-214ENST00000521550 POLR3GLQ9BT43 218 aa19.22■□□□□ 0.67
SPIDR-214ENST00000521550 TRPM1Q7Z4N2 1603 aa19.21■□□□□ 0.67
SPIDR-214ENST00000521550 MRS2Q9HD23 443 aa19.21■□□□□ 0.67
SPIDR-214ENST00000521550 LAMC1P11047 1609 aa19.2■□□□□ 0.66
SPIDR-214ENST00000521550 ADGRB3O60242 1522 aa19.19■□□□□ 0.66
SPIDR-214ENST00000521550 E9PCH4 1651 aa19.19■□□□□ 0.66
SPIDR-214ENST00000521550 ST20-MTHFSA0A0A6YYL1 179 aa19.18■□□□□ 0.66
SPIDR-214ENST00000521550 GPRASP1Q5JY77 1395 aa19.18■□□□□ 0.66
SPIDR-214ENST00000521550 STRCP1A6NGW2 1772 aa19.18■□□□□ 0.66
SPIDR-214ENST00000521550 KTN1Q86UP2 1357 aaKnown RBP19.18■□□□□ 0.66
SPIDR-214ENST00000521550 MYO5BQ9ULV0 1848 aa19.17■□□□□ 0.66
SPIDR-214ENST00000521550 TRPM2O94759 1503 aa19.15■□□□□ 0.66
SPIDR-214ENST00000521550 TOM1O60784 492 aa19.14■□□□□ 0.65
SPIDR-214ENST00000521550 TMEM131LA2VDJ0 1609 aa19.12■□□□□ 0.65
SPIDR-214ENST00000521550 SPHKAPQ2M3C7 1700 aa19.12■□□□□ 0.65
SPIDR-214ENST00000521550 LRRC7Q96NW7 1537 aa19.11■□□□□ 0.65
SPIDR-214ENST00000521550 FKBP8Q14318 412 aa19.11■□□□□ 0.65
SPIDR-214ENST00000521550 FAM9BQ8IZU0 186 aa19.11■□□□□ 0.65
SPIDR-214ENST00000521550 CHGAP10645 457 aaKnown RBP19.09■□□□□ 0.65
SPIDR-214ENST00000521550 HDGFP51858 240 aaKnown RBP19.09■□□□□ 0.65
SPIDR-214ENST00000521550 RALBP1Q15311 655 aa19.09■□□□□ 0.65
SPIDR-214ENST00000521550 PIP4K2BP78356 416 aa19.09■□□□□ 0.65
SPIDR-214ENST00000521550 BCANQ96GW7 911 aa19.08■□□□□ 0.64
SPIDR-214ENST00000521550 SLC26A8Q96RN1 970 aa19.08■□□□□ 0.64
SPIDR-214ENST00000521550 ZFYVE9O95405 1425 aa19.08■□□□□ 0.64
SPIDR-214ENST00000521550 TMF1P82094 1093 aa19.07■□□□□ 0.64
SPIDR-214ENST00000521550 ZBED9Q6R2W3 1325 aa19.07■□□□□ 0.64
SPIDR-214ENST00000521550 RIMS2Q9UQ26 1411 aa19.07■□□□□ 0.64
SPIDR-214ENST00000521550 NBPF1Q3BBV0 1214 aa19.06■□□□□ 0.64
SPIDR-214ENST00000521550 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
SPIDR-214ENST00000521550 CCDC184Q52MB2 194 aa19.04■□□□□ 0.64
SPIDR-214ENST00000521550 TMC1Q8TDI8 760 aa19.04■□□□□ 0.64
SPIDR-214ENST00000521550 XIRP1Q702N8 1843 aaKnown RBP19.04■□□□□ 0.64
SPIDR-214ENST00000521550 CDCA8Q53HL2 280 aa19.04■□□□□ 0.64
SPIDR-214ENST00000521550 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.04■□□□□ 0.64
SPIDR-214ENST00000521550 PLEKHG1Q9ULL1 1385 aa19.03■□□□□ 0.64
SPIDR-214ENST00000521550 KCNA6P17658 529 aa19.03■□□□□ 0.64
SPIDR-214ENST00000521550 SENP3Q9H4L4 574 aaPredicted RBP19.03■□□□□ 0.64
SPIDR-214ENST00000521550 ALKQ9UM73 1620 aa19.03■□□□□ 0.64
SPIDR-214ENST00000521550 CLTCL1P53675 1640 aa19.02■□□□□ 0.64
SPIDR-214ENST00000521550 MYBBP1AQ9BQG0 1328 aaKnown RBP19.02■□□□□ 0.64
SPIDR-214ENST00000521550 BRD4O60885 1362 aaPredicted RBP19.01■□□□□ 0.63
SPIDR-214ENST00000521550 EIF3AQ14152 1382 aaKnown RBP19.01■□□□□ 0.63
SPIDR-214ENST00000521550 DISP3Q9P2K9 1392 aa19■□□□□ 0.63
SPIDR-214ENST00000521550 NUTM2DQ5VT03 806 aaPredicted RBP19■□□□□ 0.63
SPIDR-214ENST00000521550 ERICH6BQ5W0A0 696 aa19■□□□□ 0.63
SPIDR-214ENST00000521550 HSPA1LP34931 641 aa18.99■□□□□ 0.63
SPIDR-214ENST00000521550 CHD2O14647 1828 aaKnown RBP18.99■□□□□ 0.63
SPIDR-214ENST00000521550 NWD1Q149M9 1564 aa18.99■□□□□ 0.63
SPIDR-214ENST00000521550 PROSER2Q86WR7 435 aaPredicted RBP18.97■□□□□ 0.63
SPIDR-214ENST00000521550 TESK2Q96S53 571 aa18.97■□□□□ 0.63
SPIDR-214ENST00000521550 TMEM94Q12767 1356 aa18.97■□□□□ 0.63
SPIDR-214ENST00000521550 KIAA1210Q9ULL0 1709 aa18.97■□□□□ 0.63
SPIDR-214ENST00000521550 NKTRP30414 1462 aaKnown RBP18.97■□□□□ 0.63
SPIDR-214ENST00000521550 KIF1BO60333 1816 aa18.97■□□□□ 0.63
SPIDR-214ENST00000521550 TBX22Q9Y458 520 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms