RNA–Protein interactions for RNA: ENST00000521179.5

TVP23C-206, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-206ENST00000521179 MDM2Q00987 491 aaPredicted RBP12.09□□□□□ -0.47
TVP23C-206ENST00000521179 SWT1Q5T5J6 900 aaKnown RBP12.09□□□□□ -0.47
TVP23C-206ENST00000521179 SAMD7Q7Z3H4 446 aa12.09□□□□□ -0.47
TVP23C-206ENST00000521179 DAXXQ9UER7 740 aaPredicted RBP12.09□□□□□ -0.47
TVP23C-206ENST00000521179 CLCN1P35523 988 aa12.08□□□□□ -0.48
TVP23C-206ENST00000521179 ANKK1Q8NFD2 765 aa12.08□□□□□ -0.48
TVP23C-206ENST00000521179 WNT2BQ93097 391 aa12.08□□□□□ -0.48
TVP23C-206ENST00000521179 GPCPD1Q9NPB8 672 aa12.07□□□□□ -0.48
TVP23C-206ENST00000521179 SOWAHBA6NEL2 793 aa12.06□□□□□ -0.48
TVP23C-206ENST00000521179 LRCH3Q96II8 777 aa12.06□□□□□ -0.48
TVP23C-206ENST00000521179 REPIN1Q9BWE0 567 aaKnown RBP12.06□□□□□ -0.48
TVP23C-206ENST00000521179 ZCCHC6Q5VYS8 1495 aaKnown RBP12.06□□□□□ -0.48
TVP23C-206ENST00000521179 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.05□□□□□ -0.48
TVP23C-206ENST00000521179 TTLL12Q14166 644 aaPredicted RBP12.04□□□□□ -0.48
TVP23C-206ENST00000521179 PARP9Q8IXQ6 854 aa12.04□□□□□ -0.48
TVP23C-206ENST00000521179 KCTD12Q96CX2 325 aaKnown RBP12.04□□□□□ -0.48
TVP23C-206ENST00000521179 MYO15BQ96JP2 1530 aa12.04□□□□□ -0.48
TVP23C-206ENST00000521179 SLF2Q8IX21 1173 aa12.03□□□□□ -0.48
TVP23C-206ENST00000521179 THSD4Q6ZMP0 1018 aa12.02□□□□□ -0.49
TVP23C-206ENST00000521179 SLC4A3P48751 1232 aa12.01□□□□□ -0.49
TVP23C-206ENST00000521179 BCAMP50895 628 aa12.01□□□□□ -0.49
TVP23C-206ENST00000521179 GIGYF2Q6Y7W6 1299 aaKnown RBP12.01□□□□□ -0.49
TVP23C-206ENST00000521179 FAM217BQ9NTX9 383 aaPredicted RBP12.01□□□□□ -0.49
TVP23C-206ENST00000521179 MMRN1Q13201 1228 aa12□□□□□ -0.49
TVP23C-206ENST00000521179 SULF1Q8IWU6 871 aa12□□□□□ -0.49
TVP23C-206ENST00000521179 BRPF1P55201 1214 aaPredicted RBP11.99□□□□□ -0.49
TVP23C-206ENST00000521179 RNF166Q96A37 237 aaPredicted RBP11.99□□□□□ -0.49
TVP23C-206ENST00000521179 SLC10A3P09131 477 aa11.98□□□□□ -0.49
TVP23C-206ENST00000521179 SSTR3P32745 418 aaPredicted RBP11.98□□□□□ -0.49
TVP23C-206ENST00000521179 TSR3Q9UJK0 312 aaKnown RBP11.98□□□□□ -0.49
TVP23C-206ENST00000521179 DCAF1Q9Y4B6 1507 aa11.97□□□□□ -0.49
TVP23C-206ENST00000521179 DDX11L8A8MPP1 907 aa11.97□□□□□ -0.49
TVP23C-206ENST00000521179 RSPH4AQ5TD94 716 aa11.97□□□□□ -0.49
TVP23C-206ENST00000521179 NECTIN2Q92692 538 aa11.97□□□□□ -0.49
TVP23C-206ENST00000521179 HPS5Q9UPZ3 1129 aa11.97□□□□□ -0.49
TVP23C-206ENST00000521179 CD46P15529 392 aa11.96□□□□□ -0.49
TVP23C-206ENST00000521179 PPP4CP60510 307 aa11.96□□□□□ -0.49
TVP23C-206ENST00000521179 NEUROD2Q15784 382 aa11.96□□□□□ -0.49
TVP23C-206ENST00000521179 KDM4CQ9H3R0 1056 aa11.96□□□□□ -0.49
TVP23C-206ENST00000521179 GPBP1L1Q9HC44 474 aaPredicted RBP11.96□□□□□ -0.49
TVP23C-206ENST00000521179 RNF40O75150 1001 aa11.95□□□□□ -0.5
TVP23C-206ENST00000521179 MS4A1P11836 297 aa11.94□□□□□ -0.5
TVP23C-206ENST00000521179 WBP1LQ9NX94 342 aa11.93□□□□□ -0.5
TVP23C-206ENST00000521179 RDH13Q8NBN7 331 aa11.92□□□□□ -0.5
TVP23C-206ENST00000521179 GCGRP47871 477 aa11.91□□□□□ -0.5
TVP23C-206ENST00000521179 PTPN5P54829 565 aa11.91□□□□□ -0.5
TVP23C-206ENST00000521179 NYAP1Q6ZVC0 841 aa11.9□□□□□ -0.5
TVP23C-206ENST00000521179 HCSTQ9UBK5 93 aa11.9□□□□□ -0.5
TVP23C-206ENST00000521179 UNC13AQ9UPW8 1703 aa11.9□□□□□ -0.5
TVP23C-206ENST00000521179 CFHP08603 1231 aa11.88□□□□□ -0.51
TVP23C-206ENST00000521179 BEGAINQ9BUH8 593 aa11.88□□□□□ -0.51
TVP23C-206ENST00000521179 KMT5BQ4FZB7 885 aa11.87□□□□□ -0.51
TVP23C-206ENST00000521179 PRR14Q9BWN1 585 aa11.87□□□□□ -0.51
TVP23C-206ENST00000521179 CECR2Q9BXF3 1484 aa11.87□□□□□ -0.51
TVP23C-206ENST00000521179 APLP1P51693 650 aa11.86□□□□□ -0.51
TVP23C-206ENST00000521179 FAM117AQ9C073 453 aa11.86□□□□□ -0.51
TVP23C-206ENST00000521179 ACTN4O43707 911 aaKnown RBP11.85□□□□□ -0.51
TVP23C-206ENST00000521179 DDRGK1Q96HY6 314 aa11.84□□□□□ -0.51
TVP23C-206ENST00000521179 BICRAQ9NZM4 1560 aa11.84□□□□□ -0.51
TVP23C-206ENST00000521179 KDM4AO75164 1064 aa11.82□□□□□ -0.52
TVP23C-206ENST00000521179 PLEKHG3A1L390 1219 aa11.81□□□□□ -0.52
TVP23C-206ENST00000521179 USP46P62068 366 aa11.81□□□□□ -0.52
TVP23C-206ENST00000521179 NUTM1Q86Y26 1132 aa11.81□□□□□ -0.52
TVP23C-206ENST00000521179 SPIRE2Q8WWL2 714 aa11.81□□□□□ -0.52
TVP23C-206ENST00000521179 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
TVP23C-206ENST00000521179 FUT2Q10981 343 aa11.8□□□□□ -0.52
TVP23C-206ENST00000521179 DIXDC1Q155Q3 683 aa11.8□□□□□ -0.52
TVP23C-206ENST00000521179 CC2D2AQ9P2K1 1620 aa11.79□□□□□ -0.52
TVP23C-206ENST00000521179 ATP6V1AP38606 617 aa11.79□□□□□ -0.52
TVP23C-206ENST00000521179 IL27Q8NEV9 243 aa11.78□□□□□ -0.52
TVP23C-206ENST00000521179 TBC1D2Q9BYX2 928 aa11.78□□□□□ -0.52
TVP23C-206ENST00000521179 GRIPAP1Q4V328 841 aa11.77□□□□□ -0.53
TVP23C-206ENST00000521179 PCDHB3Q9Y5E6 796 aa11.77□□□□□ -0.53
TVP23C-206ENST00000521179 HOXA2O43364 376 aa11.76□□□□□ -0.53
TVP23C-206ENST00000521179 RSPH6AQ9H0K4 717 aa11.76□□□□□ -0.53
TVP23C-206ENST00000521179 MORN1Q5T089 497 aa11.75□□□□□ -0.53
TVP23C-206ENST00000521179 PLSCR2Q9NRY7 297 aa11.74□□□□□ -0.53
TVP23C-206ENST00000521179 PUS10Q3MIT2 529 aaKnown RBP11.73□□□□□ -0.53
TVP23C-206ENST00000521179 TJAP1Q5JTD0 557 aa11.73□□□□□ -0.53
TVP23C-206ENST00000521179 MYSM1Q5VVJ2 828 aa11.73□□□□□ -0.53
TVP23C-206ENST00000521179 BLOC1S3Q6QNY0 202 aa11.73□□□□□ -0.53
TVP23C-206ENST00000521179 MOXD2PA6NHM9 499 aa11.72□□□□□ -0.53
TVP23C-206ENST00000521179 GJA5P36382 358 aa11.72□□□□□ -0.53
TVP23C-206ENST00000521179 MTRQ99707 1265 aa11.72□□□□□ -0.53
TVP23C-206ENST00000521179 NDUFV2P19404 249 aa11.71□□□□□ -0.53
TVP23C-206ENST00000521179 SH3D19Q5HYK7 790 aa11.71□□□□□ -0.53
TVP23C-206ENST00000521179 SCUBE3Q8IX30 993 aa11.71□□□□□ -0.53
TVP23C-206ENST00000521179 GOPCQ9HD26 462 aa11.71□□□□□ -0.53
TVP23C-206ENST00000521179 SPTLC1O15269 473 aa11.7□□□□□ -0.54
TVP23C-206ENST00000521179 NR1I2O75469 434 aa11.7□□□□□ -0.54
TVP23C-206ENST00000521179 ITGBL1O95965 494 aaPredicted RBP11.7□□□□□ -0.54
TVP23C-206ENST00000521179 IL21Q9HBE4 155 aa11.7□□□□□ -0.54
TVP23C-206ENST00000521179 SLC27A5Q9Y2P5 690 aa11.7□□□□□ -0.54
TVP23C-206ENST00000521179 COPS2P61201 443 aa11.69□□□□□ -0.54
TVP23C-206ENST00000521179 SKIV2LQ15477 1246 aaKnown RBP11.69□□□□□ -0.54
TVP23C-206ENST00000521179 RSBN1LQ6PCB5 846 aaPredicted RBP11.69□□□□□ -0.54
TVP23C-206ENST00000521179 RIC3Q7Z5B4 369 aa11.69□□□□□ -0.54
TVP23C-206ENST00000521179 HLA-CQ95604 372 aa11.69□□□□□ -0.54
TVP23C-206ENST00000521179 FDX1P10109 184 aa11.68□□□□□ -0.54
TVP23C-206ENST00000521179 TUSC1Q2TAM9 212 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms