RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 ADGRB3O60242 1522 aa20.83■□□□□ 0.92
SRGAP3-212ENST00000520860 C14orf37Q86TY3 774 aa20.82■□□□□ 0.92
SRGAP3-212ENST00000520860 LMTK2Q8IWU2 1503 aa20.79■□□□□ 0.92
SRGAP3-212ENST00000520860 PPP1R15AO75807 674 aaPredicted RBP20.79■□□□□ 0.92
SRGAP3-212ENST00000520860 SLC52A1Q9NWF4 448 aa20.79■□□□□ 0.92
SRGAP3-212ENST00000520860 CDK12Q9NYV4 1490 aaPredicted RBP20.79■□□□□ 0.92
SRGAP3-212ENST00000520860 NOS1P29475 1434 aa20.78■□□□□ 0.92
SRGAP3-212ENST00000520860 NCOA3Q9Y6Q9 1424 aa20.78■□□□□ 0.92
SRGAP3-212ENST00000520860 PLEKHG1Q9ULL1 1385 aa20.78■□□□□ 0.92
SRGAP3-212ENST00000520860 SHPRHQ149N8 1683 aa20.77■□□□□ 0.92
SRGAP3-212ENST00000520860 CHD2O14647 1828 aaKnown RBP20.77■□□□□ 0.92
SRGAP3-212ENST00000520860 HDGFP51858 240 aaKnown RBP20.77■□□□□ 0.92
SRGAP3-212ENST00000520860 CADPS2Q86UW7 1296 aa20.77■□□□□ 0.92
SRGAP3-212ENST00000520860 AHDC1Q5TGY3 1603 aaPredicted RBP20.77■□□□□ 0.92
SRGAP3-212ENST00000520860 ABCC5O15440 1437 aa20.77■□□□□ 0.91
SRGAP3-212ENST00000520860 CROCC2H7BZ55 1655 aa20.76■□□□□ 0.91
SRGAP3-212ENST00000520860 NUTM2BA6NNL0 878 aaPredicted RBP20.75■□□□□ 0.91
SRGAP3-212ENST00000520860 NUTM2EB1AL46 878 aaPredicted RBP20.75■□□□□ 0.91
SRGAP3-212ENST00000520860 ATF3P18847 181 aa20.75■□□□□ 0.91
SRGAP3-212ENST00000520860 NUTM2AQ8IVF1 878 aaPredicted RBP20.75■□□□□ 0.91
SRGAP3-212ENST00000520860 KANK4Q5T7N3 995 aaPredicted RBP20.74■□□□□ 0.91
SRGAP3-212ENST00000520860 ZFYVE9O95405 1425 aa20.73■□□□□ 0.91
SRGAP3-212ENST00000520860 C19orf44Q9H6X5 657 aa20.73■□□□□ 0.91
SRGAP3-212ENST00000520860 TBX22Q9Y458 520 aa20.73■□□□□ 0.91
SRGAP3-212ENST00000520860 VPS8Q8N3P4 1428 aa20.72■□□□□ 0.91
SRGAP3-212ENST00000520860 AFF2P51816 1311 aa20.72■□□□□ 0.91
SRGAP3-212ENST00000520860 RIMS2Q9UQ26 1411 aa20.71■□□□□ 0.91
SRGAP3-212ENST00000520860 ANKRD30AQ9BXX3 1397 aa20.71■□□□□ 0.91
SRGAP3-212ENST00000520860 DAPK1P53355 1430 aa20.7■□□□□ 0.9
SRGAP3-212ENST00000520860 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.7■□□□□ 0.9
SRGAP3-212ENST00000520860 BRINP3Q76B58 766 aa20.68■□□□□ 0.9
SRGAP3-212ENST00000520860 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.67■□□□□ 0.9
SRGAP3-212ENST00000520860 CHIC2Q9UKJ5 165 aa20.67■□□□□ 0.9
SRGAP3-212ENST00000520860 RPRD2Q5VT52 1461 aaKnown RBP20.67■□□□□ 0.9
SRGAP3-212ENST00000520860 PTPN23Q9H3S7 1636 aa20.67■□□□□ 0.9
SRGAP3-212ENST00000520860 DIP2AQ14689 1571 aa20.66■□□□□ 0.9
SRGAP3-212ENST00000520860 MYO5BQ9ULV0 1848 aa20.65■□□□□ 0.9
SRGAP3-212ENST00000520860 RGS12O14924 1447 aa20.65■□□□□ 0.9
SRGAP3-212ENST00000520860 PIK3R4Q99570 1358 aa20.65■□□□□ 0.9
SRGAP3-212ENST00000520860 GCC2Q8IWJ2 1684 aa20.64■□□□□ 0.9
SRGAP3-212ENST00000520860 RBM6P78332 1123 aaKnown RBP20.64■□□□□ 0.89
SRGAP3-212ENST00000520860 NUTM2DQ5VT03 806 aaPredicted RBP20.64■□□□□ 0.89
SRGAP3-212ENST00000520860 CHGAP10645 457 aaKnown RBP20.63■□□□□ 0.89
SRGAP3-212ENST00000520860 QTRT2Q9H974 415 aaKnown RBP20.63■□□□□ 0.89
SRGAP3-212ENST00000520860 ADAMTS13Q76LX8 1427 aa20.62■□□□□ 0.89
SRGAP3-212ENST00000520860 C8orf37Q96NL8 207 aa20.62■□□□□ 0.89
SRGAP3-212ENST00000520860 SETD5Q9C0A6 1442 aa20.61■□□□□ 0.89
SRGAP3-212ENST00000520860 TMEM131LA2VDJ0 1609 aa20.61■□□□□ 0.89
SRGAP3-212ENST00000520860 FOXD1Q16676 465 aa20.61■□□□□ 0.89
SRGAP3-212ENST00000520860 ASXL1Q8IXJ9 1541 aa20.6■□□□□ 0.89
SRGAP3-212ENST00000520860 LRRC59Q96AG4 307 aaKnown RBP20.6■□□□□ 0.89
SRGAP3-212ENST00000520860 DCCP43146 1447 aa20.6■□□□□ 0.89
SRGAP3-212ENST00000520860 AMOTL2Q9Y2J4 779 aa20.59■□□□□ 0.89
SRGAP3-212ENST00000520860 ATAD2Q6PL18 1390 aa20.58■□□□□ 0.88
SRGAP3-212ENST00000520860 TRPM2O94759 1503 aa20.58■□□□□ 0.88
SRGAP3-212ENST00000520860 NGLY1Q96IV0 654 aa20.57■□□□□ 0.88
SRGAP3-212ENST00000520860 ZRANB1Q9UGI0 708 aa20.56■□□□□ 0.88
SRGAP3-212ENST00000520860 PNPLA6Q8IY17 1366 aa20.54■□□□□ 0.88
SRGAP3-212ENST00000520860 MST1RQ04912 1400 aa20.53■□□□□ 0.88
SRGAP3-212ENST00000520860 NHSL1Q5SYE7 1610 aa20.53■□□□□ 0.88
SRGAP3-212ENST00000520860 APLP2Q06481 763 aa20.53■□□□□ 0.88
SRGAP3-212ENST00000520860 PTPRUQ92729 1446 aa20.53■□□□□ 0.88
SRGAP3-212ENST00000520860 ANKRD50Q9ULJ7 1429 aa20.53■□□□□ 0.88
SRGAP3-212ENST00000520860 ADGRL2O95490 1459 aa20.52■□□□□ 0.88
SRGAP3-212ENST00000520860 SRCAPQ6ZRS2 3230 aa20.5■□□□□ 0.87
SRGAP3-212ENST00000520860 ADAMTS2O95450 1211 aa20.5■□□□□ 0.87
SRGAP3-212ENST00000520860 DDX17Q92841 729 aaKnown RBP20.49■□□□□ 0.87
SRGAP3-212ENST00000520860 UNC13BO14795 1591 aa20.46■□□□□ 0.87
SRGAP3-212ENST00000520860 USP21Q9UK80 565 aa20.46■□□□□ 0.87
SRGAP3-212ENST00000520860 TRPC5Q9UL62 973 aaPredicted RBP20.46■□□□□ 0.87
SRGAP3-212ENST00000520860 XRN1Q8IZH2 1706 aaKnown RBP20.45■□□□□ 0.86
SRGAP3-212ENST00000520860 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
SRGAP3-212ENST00000520860 SETBP1Q9Y6X0 1596 aa20.42■□□□□ 0.86
SRGAP3-212ENST00000520860 CCDC125Q86Z20 511 aa20.42■□□□□ 0.86
SRGAP3-212ENST00000520860 E9PCH4 1651 aa20.42■□□□□ 0.86
SRGAP3-212ENST00000520860 FAM50AQ14320 339 aaKnown RBP20.41■□□□□ 0.86
SRGAP3-212ENST00000520860 LOC105371045A0A1W2PR82 267 aa20.39■□□□□ 0.85
SRGAP3-212ENST00000520860 NRXN3Q9Y4C0 1643 aa20.38■□□□□ 0.85
SRGAP3-212ENST00000520860 PTCH1Q13635 1447 aa20.38■□□□□ 0.85
SRGAP3-212ENST00000520860 METP08581 1390 aa20.38■□□□□ 0.85
SRGAP3-212ENST00000520860 FNBP4Q8N3X1 1017 aaPredicted RBP20.38■□□□□ 0.85
SRGAP3-212ENST00000520860 C1orf167Q5SNV9 1468 aa20.37■□□□□ 0.85
SRGAP3-212ENST00000520860 ATRNO75882 1429 aa20.37■□□□□ 0.85
SRGAP3-212ENST00000520860 SOS2Q07890 1332 aaPredicted RBP20.35■□□□□ 0.85
SRGAP3-212ENST00000520860 ZNF326Q5BKZ1 582 aaKnown RBP20.35■□□□□ 0.85
SRGAP3-212ENST00000520860 NALCNQ8IZF0 1738 aa20.35■□□□□ 0.85
SRGAP3-212ENST00000520860 LAMC1P11047 1609 aa20.33■□□□□ 0.84
SRGAP3-212ENST00000520860 IQGAP3Q86VI3 1631 aa20.33■□□□□ 0.84
SRGAP3-212ENST00000520860 ORAI2Q96SN7 254 aa20.31■□□□□ 0.84
SRGAP3-212ENST00000520860 NUP155O75694 1391 aa20.3■□□□□ 0.84
SRGAP3-212ENST00000520860 GJD4Q96KN9 370 aaPredicted RBP20.27■□□□□ 0.84
SRGAP3-212ENST00000520860 COL22A1Q8NFW1 1626 aaPredicted RBP20.27■□□□□ 0.83
SRGAP3-212ENST00000520860 BLMP54132 1417 aaPredicted RBP20.27■□□□□ 0.83
SRGAP3-212ENST00000520860 BCL9LQ86UU0 1499 aa20.26■□□□□ 0.83
SRGAP3-212ENST00000520860 MYOM2P54296 1465 aa20.25■□□□□ 0.83
SRGAP3-212ENST00000520860 ROCK1Q13464 1354 aa20.23■□□□□ 0.83
SRGAP3-212ENST00000520860 EP400Q96L91 3159 aa20.23■□□□□ 0.83
SRGAP3-212ENST00000520860 SF3B2Q13435 895 aaKnown RBP20.23■□□□□ 0.83
SRGAP3-212ENST00000520860 NPHP3Q7Z494 1330 aa20.23■□□□□ 0.83
SRGAP3-212ENST00000520860 SPHKAPQ2M3C7 1700 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms