RNA–Protein interactions for RNA: ENST00000520851.1

PDGFRB-208, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 2

Gene PDGFRB, Length 406 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-208ENST00000520851 UHRF1BP1Q6BDS2 1440 aa12.28□□□□□ -0.44
PDGFRB-208ENST00000520851 POLR1AO95602 1720 aaPredicted RBP12.28□□□□□ -0.44
PDGFRB-208ENST00000520851 TMEM131LA2VDJ0 1609 aa12.28□□□□□ -0.44
PDGFRB-208ENST00000520851 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.44
PDGFRB-208ENST00000520851 UGGT1Q9NYU2 1555 aa12.27□□□□□ -0.44
PDGFRB-208ENST00000520851 FBXO31Q5XUX0 539 aaPredicted RBP12.27□□□□□ -0.45
PDGFRB-208ENST00000520851 ADGRB3O60242 1522 aa12.27□□□□□ -0.45
PDGFRB-208ENST00000520851 IFT172Q9UG01 1749 aa12.26□□□□□ -0.45
PDGFRB-208ENST00000520851 PPLO60437 1756 aa12.26□□□□□ -0.45
PDGFRB-208ENST00000520851 ANKRD30BQ9BXX2 1392 aa12.26□□□□□ -0.45
PDGFRB-208ENST00000520851 PLA2R1Q13018 1463 aa12.24□□□□□ -0.45
PDGFRB-208ENST00000520851 STAG3Q9UJ98 1225 aa12.24□□□□□ -0.45
PDGFRB-208ENST00000520851 IDI1Q13907 227 aa12.22□□□□□ -0.45
PDGFRB-208ENST00000520851 THEMISQ8N1K5 641 aaPredicted RBP12.22□□□□□ -0.45
PDGFRB-208ENST00000520851 CCER1Q8TC90 406 aaPredicted RBP12.22□□□□□ -0.45
PDGFRB-208ENST00000520851 HDGFP51858 240 aaKnown RBP12.21□□□□□ -0.45
PDGFRB-208ENST00000520851 SLIT1O75093 1534 aa12.2□□□□□ -0.46
PDGFRB-208ENST00000520851 LMTK3Q96Q04 1460 aa12.2□□□□□ -0.46
PDGFRB-208ENST00000520851 RPGRIP1LQ68CZ1 1315 aa12.18□□□□□ -0.46
PDGFRB-208ENST00000520851 CHGAP10645 457 aaKnown RBP12.18□□□□□ -0.46
PDGFRB-208ENST00000520851 C1QBPQ07021 282 aaKnown RBP12.18□□□□□ -0.46
PDGFRB-208ENST00000520851 STAC3Q96MF2 364 aa12.18□□□□□ -0.46
PDGFRB-208ENST00000520851 SPATA31E1Q6ZUB1 1445 aa12.17□□□□□ -0.46
PDGFRB-208ENST00000520851 STRCQ7RTU9 1775 aa12.17□□□□□ -0.46
PDGFRB-208ENST00000520851 NEXMIFQ5QGS0 1516 aa12.16□□□□□ -0.46
PDGFRB-208ENST00000520851 ARHGAP23Q9P227 1491 aa12.16□□□□□ -0.46
PDGFRB-208ENST00000520851 LAMC1P11047 1609 aa12.16□□□□□ -0.46
PDGFRB-208ENST00000520851 ZNF326Q5BKZ1 582 aaKnown RBP12.16□□□□□ -0.46
PDGFRB-208ENST00000520851 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.16□□□□□ -0.46
PDGFRB-208ENST00000520851 EID1Q9Y6B2 187 aa12.16□□□□□ -0.46
PDGFRB-208ENST00000520851 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
PDGFRB-208ENST00000520851 TIMELESSQ9UNS1 1208 aa12.15□□□□□ -0.46
PDGFRB-208ENST00000520851 TMEM2Q9UHN6 1383 aa12.15□□□□□ -0.46
PDGFRB-208ENST00000520851 KIAA1210Q9ULL0 1709 aa12.14□□□□□ -0.47
PDGFRB-208ENST00000520851 TONSLQ96HA7 1378 aa12.14□□□□□ -0.47
PDGFRB-208ENST00000520851 ZFYVE9O95405 1425 aa12.13□□□□□ -0.47
PDGFRB-208ENST00000520851 RIMS2Q9UQ26 1411 aa12.13□□□□□ -0.47
PDGFRB-208ENST00000520851 VGFO15240 615 aaPredicted RBP12.13□□□□□ -0.47
PDGFRB-208ENST00000520851 ANKLE2Q86XL3 938 aa12.13□□□□□ -0.47
PDGFRB-208ENST00000520851 SPINK5Q9NQ38 1064 aaPredicted RBP12.13□□□□□ -0.47
PDGFRB-208ENST00000520851 MYOM2P54296 1465 aa12.13□□□□□ -0.47
PDGFRB-208ENST00000520851 SCAF11Q99590 1463 aaKnown RBP12.13□□□□□ -0.47
PDGFRB-208ENST00000520851 NEUROD1Q13562 356 aa12.12□□□□□ -0.47
PDGFRB-208ENST00000520851 DIP2AQ14689 1571 aa12.12□□□□□ -0.47
PDGFRB-208ENST00000520851 MED14O60244 1454 aa12.11□□□□□ -0.47
PDGFRB-208ENST00000520851 RGL3Q3MIN7 710 aa12.11□□□□□ -0.47
PDGFRB-208ENST00000520851 SIN3AQ96ST3 1273 aa12.11□□□□□ -0.47
PDGFRB-208ENST00000520851 SETBP1Q9Y6X0 1596 aa12.1□□□□□ -0.47
PDGFRB-208ENST00000520851 PPP1R15AO75807 674 aaPredicted RBP12.1□□□□□ -0.47
PDGFRB-208ENST00000520851 TXNDC2Q86VQ3 553 aa12.1□□□□□ -0.47
PDGFRB-208ENST00000520851 CHD2O14647 1828 aaKnown RBP12.09□□□□□ -0.47
PDGFRB-208ENST00000520851 SETD1AO15047 1707 aaKnown RBP12.09□□□□□ -0.47
PDGFRB-208ENST00000520851 ZNF219Q9P2Y4 722 aaPredicted RBP12.09□□□□□ -0.47
PDGFRB-208ENST00000520851 PLEKHG1Q9ULL1 1385 aa12.08□□□□□ -0.48
PDGFRB-208ENST00000520851 DCAF11Q8TEB1 546 aa12.08□□□□□ -0.48
PDGFRB-208ENST00000520851 NRXN3Q9Y4C0 1643 aa12.08□□□□□ -0.48
PDGFRB-208ENST00000520851 TRPM1Q7Z4N2 1603 aa12.07□□□□□ -0.48
PDGFRB-208ENST00000520851 NRXN1Q9ULB1 1477 aa12.07□□□□□ -0.48
PDGFRB-208ENST00000520851 NPHP4O75161 1426 aaPredicted RBP12.06□□□□□ -0.48
PDGFRB-208ENST00000520851 CAPN15O75808 1086 aa12.06□□□□□ -0.48
PDGFRB-208ENST00000520851 HSPA2P54652 639 aa12.06□□□□□ -0.48
PDGFRB-208ENST00000520851 PIK3C2GO75747 1445 aa12.05□□□□□ -0.48
PDGFRB-208ENST00000520851 ALKQ9UM73 1620 aa12.05□□□□□ -0.48
PDGFRB-208ENST00000520851 L3MBTL2Q969R5 705 aa12.05□□□□□ -0.48
PDGFRB-208ENST00000520851 KNDC1Q76NI1 1749 aa12.05□□□□□ -0.48
PDGFRB-208ENST00000520851 LTKP29376 864 aa12.04□□□□□ -0.48
PDGFRB-208ENST00000520851 BCANQ96GW7 911 aa12.04□□□□□ -0.48
PDGFRB-208ENST00000520851 KDM2AQ9Y2K7 1162 aa12.03□□□□□ -0.48
PDGFRB-208ENST00000520851 NCKAP5LQ9HCH0 1330 aa12.03□□□□□ -0.48
PDGFRB-208ENST00000520851 PRAG1Q86YV5 1406 aa12.03□□□□□ -0.48
PDGFRB-208ENST00000520851 ZEB1P37275 1124 aaPredicted RBP12.02□□□□□ -0.49
PDGFRB-208ENST00000520851 PIK3R4Q99570 1358 aa12.02□□□□□ -0.49
PDGFRB-208ENST00000520851 NUTM2DQ5VT03 806 aaPredicted RBP12.01□□□□□ -0.49
PDGFRB-208ENST00000520851 TBX22Q9Y458 520 aa12.01□□□□□ -0.49
PDGFRB-208ENST00000520851 ADGRF5Q8IZF2 1346 aa12.01□□□□□ -0.49
PDGFRB-208ENST00000520851 C14orf93Q9H972 538 aaKnown RBP11.99□□□□□ -0.49
PDGFRB-208ENST00000520851 ADAMTS13Q76LX8 1427 aa11.99□□□□□ -0.49
PDGFRB-208ENST00000520851 NWD1Q149M9 1564 aa11.99□□□□□ -0.49
PDGFRB-208ENST00000520851 XRN1Q8IZH2 1706 aaKnown RBP11.99□□□□□ -0.49
PDGFRB-208ENST00000520851 STRCP1A6NGW2 1772 aa11.98□□□□□ -0.49
PDGFRB-208ENST00000520851 ARHGEF28Q8N1W1 1705 aaKnown RBP11.98□□□□□ -0.49
PDGFRB-208ENST00000520851 RALGAPBQ86X10 1494 aa11.97□□□□□ -0.49
PDGFRB-208ENST00000520851 ADGRB1O14514 1584 aa11.96□□□□□ -0.5
PDGFRB-208ENST00000520851 CPS1P31327 1500 aa11.96□□□□□ -0.5
PDGFRB-208ENST00000520851 NKTRP30414 1462 aaKnown RBP11.95□□□□□ -0.5
PDGFRB-208ENST00000520851 SLC26A8Q96RN1 970 aa11.95□□□□□ -0.5
PDGFRB-208ENST00000520851 XIRP1Q702N8 1843 aaKnown RBP11.95□□□□□ -0.5
PDGFRB-208ENST00000520851 ROCK2O75116 1388 aaKnown RBP11.94□□□□□ -0.5
PDGFRB-208ENST00000520851 CFAP70Q5T0N1 1121 aa11.94□□□□□ -0.5
PDGFRB-208ENST00000520851 DLC1Q96QB1 1528 aa11.94□□□□□ -0.5
PDGFRB-208ENST00000520851 ASXL1Q8IXJ9 1541 aa11.93□□□□□ -0.5
PDGFRB-208ENST00000520851 QRICH2Q9H0J4 1663 aa11.93□□□□□ -0.5
PDGFRB-208ENST00000520851 YTHDC2Q9H6S0 1430 aaKnown RBP11.93□□□□□ -0.5
PDGFRB-208ENST00000520851 METP08581 1390 aa11.92□□□□□ -0.5
PDGFRB-208ENST00000520851 EIF3AQ14152 1382 aaKnown RBP11.92□□□□□ -0.5
PDGFRB-208ENST00000520851 GPRASP1Q5JY77 1395 aa11.92□□□□□ -0.5
PDGFRB-208ENST00000520851 KCNA6P17658 529 aa11.92□□□□□ -0.5
PDGFRB-208ENST00000520851 POLA2Q14181 598 aa11.92□□□□□ -0.5
PDGFRB-208ENST00000520851 NBPF8Q3BBV2 869 aa11.92□□□□□ -0.5
PDGFRB-208ENST00000520851 TECPR2O15040 1411 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms