RNA–Protein interactions for RNA: ENST00000520463.1

PCNX2-222, Transcript of pecanex 2, human

TSL 2

Gene PCNX2, Length 766 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCNX2-222	ENST00000520463	SHPRH	Q149N8	1683 aa		11.87	□□□□□ -0.51
PCNX2-222	ENST00000520463	RBM6	P78332	1123 aa	Known RBP	11.87	□□□□□ -0.51
PCNX2-222	ENST00000520463	SLC26A8	Q96RN1	970 aa		11.87	□□□□□ -0.51
PCNX2-222	ENST00000520463	MTUS2	Q5JR59	1369 aa		11.87	□□□□□ -0.51
PCNX2-222	ENST00000520463	TSPY4	P0CV99	314 aa		11.86	□□□□□ -0.51
PCNX2-222	ENST00000520463	TSPY10	P0CW01	314 aa		11.86	□□□□□ -0.51
PCNX2-222	ENST00000520463	NWD1	Q149M9	1564 aa		11.86	□□□□□ -0.51
PCNX2-222	ENST00000520463	RGS12	O14924	1447 aa		11.86	□□□□□ -0.51
PCNX2-222	ENST00000520463	ARHGAP31	Q2M1Z3	1444 aa		11.86	□□□□□ -0.51
PCNX2-222	ENST00000520463	AFF2	P51816	1311 aa		11.86	□□□□□ -0.51
PCNX2-222	ENST00000520463	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.85	□□□□□ -0.51
PCNX2-222	ENST00000520463	NCOA3	Q9Y6Q9	1424 aa		11.85	□□□□□ -0.51
PCNX2-222	ENST00000520463	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.84	□□□□□ -0.51
PCNX2-222	ENST00000520463	NUTM2E	B1AL46	878 aa	Predicted RBP	11.84	□□□□□ -0.51
PCNX2-222	ENST00000520463	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.84	□□□□□ -0.51
PCNX2-222	ENST00000520463	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.84	□□□□□ -0.51
PCNX2-222	ENST00000520463	QTRT2	Q9H974	415 aa	Known RBP	11.84	□□□□□ -0.51
PCNX2-222	ENST00000520463	SETBP1	Q9Y6X0	1596 aa		11.84	□□□□□ -0.51
PCNX2-222	ENST00000520463	MROH1	Q8NDA8	1641 aa		11.82	□□□□□ -0.52
PCNX2-222	ENST00000520463	KDM5A	P29375	1690 aa	Known RBP	11.82	□□□□□ -0.52
PCNX2-222	ENST00000520463	STAG3	Q9UJ98	1225 aa		11.82	□□□□□ -0.52
PCNX2-222	ENST00000520463	CEP162	Q5TB80	1403 aa		11.82	□□□□□ -0.52
PCNX2-222	ENST00000520463	PIK3C2B	O00750	1634 aa		11.82	□□□□□ -0.52
PCNX2-222	ENST00000520463	ATAD2	Q6PL18	1390 aa		11.81	□□□□□ -0.52
PCNX2-222	ENST00000520463	IDI1	Q13907	227 aa		11.81	□□□□□ -0.52
PCNX2-222	ENST00000520463	CADPS2	Q86UW7	1296 aa		11.81	□□□□□ -0.52
PCNX2-222	ENST00000520463	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.81	□□□□□ -0.52
PCNX2-222	ENST00000520463	CEP152	O94986	1710 aa		11.8	□□□□□ -0.52
PCNX2-222	ENST00000520463	ARHGEF5	Q12774	1597 aa		11.8	□□□□□ -0.52
PCNX2-222	ENST00000520463	DIP2A	Q14689	1571 aa		11.8	□□□□□ -0.52
PCNX2-222	ENST00000520463	CCDC125	Q86Z20	511 aa		11.8	□□□□□ -0.52
PCNX2-222	ENST00000520463	NGLY1	Q96IV0	654 aa		11.8	□□□□□ -0.52
PCNX2-222	ENST00000520463	C19orf44	Q9H6X5	657 aa		11.8	□□□□□ -0.52
PCNX2-222	ENST00000520463	CHD2	O14647	1828 aa	Known RBP	11.8	□□□□□ -0.52
PCNX2-222	ENST00000520463	EFCAB6	Q5THR3	1501 aa		11.8	□□□□□ -0.52
PCNX2-222	ENST00000520463	EP400	Q96L91	3159 aa		11.79	□□□□□ -0.52
PCNX2-222	ENST00000520463	ABCB7	O75027	752 aa		11.79	□□□□□ -0.52
PCNX2-222	ENST00000520463	SETD5	Q9C0A6	1442 aa		11.77	□□□□□ -0.52
PCNX2-222	ENST00000520463	EHBP1L1	Q8N3D4	1523 aa		11.77	□□□□□ -0.52
PCNX2-222	ENST00000520463	BRINP3	Q76B58	766 aa		11.77	□□□□□ -0.53
PCNX2-222	ENST00000520463	MAST1	Q9Y2H9	1570 aa		11.76	□□□□□ -0.53
PCNX2-222	ENST00000520463	ATF3	P18847	181 aa		11.76	□□□□□ -0.53
PCNX2-222	ENST00000520463	LRRC59	Q96AG4	307 aa	Known RBP	11.76	□□□□□ -0.53
PCNX2-222	ENST00000520463	C8orf37	Q96NL8	207 aa		11.76	□□□□□ -0.53
PCNX2-222	ENST00000520463	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.75	□□□□□ -0.53
PCNX2-222	ENST00000520463	BCAN	Q96GW7	911 aa		11.75	□□□□□ -0.53
PCNX2-222	ENST00000520463	TBX22	Q9Y458	520 aa		11.75	□□□□□ -0.53
PCNX2-222	ENST00000520463	APLP2	Q06481	763 aa		11.74	□□□□□ -0.53
PCNX2-222	ENST00000520463	C14orf37	Q86TY3	774 aa		11.74	□□□□□ -0.53
PCNX2-222	ENST00000520463	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.73	□□□□□ -0.53
PCNX2-222	ENST00000520463	PLEKHG1	Q9ULL1	1385 aa		11.73	□□□□□ -0.53
PCNX2-222	ENST00000520463	SLC52A1	Q9NWF4	448 aa		11.72	□□□□□ -0.53
PCNX2-222	ENST00000520463	TRPC5	Q9UL62	973 aa	Predicted RBP	11.72	□□□□□ -0.53
PCNX2-222	ENST00000520463	DUOX2	Q9NRD8	1548 aa		11.71	□□□□□ -0.53
PCNX2-222	ENST00000520463	HDGF	P51858	240 aa	Known RBP	11.71	□□□□□ -0.53
PCNX2-222	ENST00000520463	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.71	□□□□□ -0.53
PCNX2-222	ENST00000520463	NOS1	P29475	1434 aa		11.7	□□□□□ -0.54
PCNX2-222	ENST00000520463	ZFYVE9	O95405	1425 aa		11.69	□□□□□ -0.54
PCNX2-222	ENST00000520463	PNPLA6	Q8IY17	1366 aa		11.69	□□□□□ -0.54
PCNX2-222	ENST00000520463	PIK3R4	Q99570	1358 aa		11.69	□□□□□ -0.54
PCNX2-222	ENST00000520463	LRP5	O75197	1615 aa		11.69	□□□□□ -0.54
PCNX2-222	ENST00000520463	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.69	□□□□□ -0.54
PCNX2-222	ENST00000520463	USP21	Q9UK80	565 aa		11.69	□□□□□ -0.54
PCNX2-222	ENST00000520463	ADGRB3	O60242	1522 aa		11.69	□□□□□ -0.54
PCNX2-222	ENST00000520463	NHSL1	Q5SYE7	1610 aa		11.68	□□□□□ -0.54
PCNX2-222	ENST00000520463	ASXL1	Q8IXJ9	1541 aa		11.68	□□□□□ -0.54
PCNX2-222	ENST00000520463	DCC	P43146	1447 aa		11.68	□□□□□ -0.54
PCNX2-222	ENST00000520463	LMTK2	Q8IWU2	1503 aa		11.67	□□□□□ -0.54
PCNX2-222	ENST00000520463	ADAMTS2	O95450	1211 aa		11.67	□□□□□ -0.54
PCNX2-222	ENST00000520463	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.67	□□□□□ -0.54
PCNX2-222	ENST00000520463	ERBIN	Q96RT1	1412 aa		11.67	□□□□□ -0.54
PCNX2-222	ENST00000520463	KANK1	Q14678	1352 aa		11.67	□□□□□ -0.54
PCNX2-222	ENST00000520463	ATRN	O75882	1429 aa		11.66	□□□□□ -0.54
PCNX2-222	ENST00000520463	ADAMTS13	Q76LX8	1427 aa		11.66	□□□□□ -0.54
PCNX2-222	ENST00000520463	PPP1R15A	O75807	674 aa	Predicted RBP	11.65	□□□□□ -0.54
PCNX2-222	ENST00000520463	MYCN	P04198	464 aa	Predicted RBP	11.65	□□□□□ -0.54
PCNX2-222	ENST00000520463	MST1R	Q04912	1400 aa		11.65	□□□□□ -0.54
PCNX2-222	ENST00000520463	RIMS2	Q9UQ26	1411 aa		11.65	□□□□□ -0.54
PCNX2-222	ENST00000520463	BLM	P54132	1417 aa	Predicted RBP	11.64	□□□□□ -0.55
PCNX2-222	ENST00000520463	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
PCNX2-222	ENST00000520463	AMOTL2	Q9Y2J4	779 aa		11.64	□□□□□ -0.55
PCNX2-222	ENST00000520463	KIF15	Q9NS87	1388 aa		11.64	□□□□□ -0.55
PCNX2-222	ENST00000520463	PTCH1	Q13635	1447 aa		11.62	□□□□□ -0.55
PCNX2-222	ENST00000520463	DEFB132	Q7Z7B7	95 aa		11.62	□□□□□ -0.55
PCNX2-222	ENST00000520463	DDX17	Q92841	729 aa	Known RBP	11.62	□□□□□ -0.55
PCNX2-222	ENST00000520463	MYOM3	Q5VTT5	1437 aa		11.61	□□□□□ -0.55
PCNX2-222	ENST00000520463	MYO5B	Q9ULV0	1848 aa		11.61	□□□□□ -0.55
PCNX2-222	ENST00000520463	RRP7BP	Q9NSQ0	103 aa		11.61	□□□□□ -0.55
PCNX2-222	ENST00000520463	PTPRU	Q92729	1446 aa		11.6	□□□□□ -0.55
PCNX2-222	ENST00000520463	HRC	P23327	699 aa		11.6	□□□□□ -0.55
PCNX2-222	ENST00000520463	GJD4	Q96KN9	370 aa	Predicted RBP	11.6	□□□□□ -0.55
PCNX2-222	ENST00000520463	SOS2	Q07890	1332 aa	Predicted RBP	11.6	□□□□□ -0.55
PCNX2-222	ENST00000520463	TMEM131L	A2VDJ0	1609 aa		11.59	□□□□□ -0.55
PCNX2-222	ENST00000520463	BCL9L	Q86UU0	1499 aa		11.58	□□□□□ -0.56
PCNX2-222	ENST00000520463	RPRD2	Q5VT52	1461 aa	Known RBP	11.57	□□□□□ -0.56
PCNX2-222	ENST00000520463	LAMC1	P11047	1609 aa		11.57	□□□□□ -0.56
PCNX2-222	ENST00000520463	TRPM2	O94759	1503 aa		11.57	□□□□□ -0.56
PCNX2-222	ENST00000520463	SF3B2	Q13435	895 aa	Known RBP	11.57	□□□□□ -0.56
PCNX2-222	ENST00000520463	ABCC5	O15440	1437 aa		11.56	□□□□□ -0.56
PCNX2-222	ENST00000520463	YY1	P25490	414 aa		11.56	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms