RNA–Protein interactions for RNA: ENST00000520172.5

RUNX1T1-223, Transcript of RUNX1 translocation partner 1, human

TSL 4

Gene RUNX1T1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-223	ENST00000520172	SETD5	Q9C0A6	1442 aa		13	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	SF3B2	Q13435	895 aa	Known RBP	13	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12.99	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	CCDC18	Q5T9S5	1454 aa		12.99	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	BRINP3	Q76B58	766 aa		12.99	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	CADPS2	Q86UW7	1296 aa		12.98	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	CEP350	Q5VT06	3117 aa		12.98	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	PIK3C2B	O00750	1634 aa		12.98	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	ATRN	O75882	1429 aa		12.97	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	PNPLA6	Q8IY17	1366 aa		12.97	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	ATF3	P18847	181 aa		12.97	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	CAMSAP2	Q08AD1	1489 aa		12.97	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	ARHGAP35	Q9NRY4	1499 aa		12.97	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	LRRC59	Q96AG4	307 aa	Known RBP	12.96	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	STAG3	Q9UJ98	1225 aa		12.96	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	ASXL1	Q8IXJ9	1541 aa		12.96	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	CHD2	O14647	1828 aa	Known RBP	12.95	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	BCAN	Q96GW7	911 aa		12.95	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	CEP152	O94986	1710 aa		12.95	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	MROH1	Q8NDA8	1641 aa		12.95	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	MBD5	Q9P267	1494 aa		12.94	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	NCOA3	Q9Y6Q9	1424 aa		12.94	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	CCNB3	Q8WWL7	1395 aa		12.94	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	EFCAB6	Q5THR3	1501 aa		12.93	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	ZNF644	Q9H582	1327 aa	Predicted RBP	12.93	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	EHMT2	Q96KQ7	1210 aa		12.93	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	UNC13B	O14795	1591 aa		12.93	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	C1QTNF8	P60827	252 aa		12.92	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	C19orf44	Q9H6X5	657 aa		12.92	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	DCAF8L1	A6NGE4	600 aa		12.91	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.91	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	R3HDM1	Q15032	1099 aa	Known RBP	12.9	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.9	□□□□□ -0.34
RUNX1T1-223	ENST00000520172	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
RUNX1T1-223	ENST00000520172	DDX17	Q92841	729 aa	Known RBP	12.88	□□□□□ -0.35
RUNX1T1-223	ENST00000520172	CCDC141	Q6ZP82	1450 aa		12.88	□□□□□ -0.35
RUNX1T1-223	ENST00000520172	BRWD3	Q6RI45	1802 aa		12.88	□□□□□ -0.35
RUNX1T1-223	ENST00000520172	CASKIN1	Q8WXD9	1431 aa		12.87	□□□□□ -0.35
RUNX1T1-223	ENST00000520172	SPHKAP	Q2M3C7	1700 aa		12.86	□□□□□ -0.35
RUNX1T1-223	ENST00000520172	BAG6	P46379	1132 aa		12.86	□□□□□ -0.35
RUNX1T1-223	ENST00000520172	GJD4	Q96KN9	370 aa	Predicted RBP	12.86	□□□□□ -0.35
RUNX1T1-223	ENST00000520172	PTCH1	Q13635	1447 aa		12.86	□□□□□ -0.35
RUNX1T1-223	ENST00000520172	UTRN	P46939	3433 aa		12.85	□□□□□ -0.35
RUNX1T1-223	ENST00000520172	DCC	P43146	1447 aa		12.82	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	MST1R	Q04912	1400 aa		12.82	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	EEA1	Q15075	1411 aa		12.82	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	EIF2AK4	Q9P2K8	1649 aa	Known RBP	12.82	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	CAMTA1	Q9Y6Y1	1673 aa		12.82	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	GLI3	P10071	1580 aa		12.81	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	ARHGAP31	Q2M1Z3	1444 aa		12.81	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	ADGRB3	O60242	1522 aa		12.81	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	PLEKHG1	Q9ULL1	1385 aa		12.81	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	RALGAPB	Q86X10	1494 aa		12.8	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	IDI1	Q13907	227 aa		12.8	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	UBTF	P17480	764 aa	Known RBP	12.79	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.79	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	PPP1R15A	O75807	674 aa	Predicted RBP	12.78	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	EN1	Q05925	392 aa	Predicted RBP	12.78	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12.78	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	FYCO1	Q9BQS8	1478 aa		12.78	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	MARF1	Q9Y4F3	1742 aa	Known RBP	12.77	□□□□□ -0.36
RUNX1T1-223	ENST00000520172	NINL	Q9Y2I6	1382 aa		12.77	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	SEPT12	Q8IYM1	358 aa		12.76	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	TBX22	Q9Y458	520 aa		12.76	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	MTUS2	Q5JR59	1369 aa		12.75	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.75	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	ZFYVE9	O95405	1425 aa		12.74	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	KRT27	Q7Z3Y8	459 aa		12.74	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	RGPD1	P0DJD0	1748 aa		12.74	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	TRPM2	O94759	1503 aa		12.73	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	MYOM2	P54296	1465 aa		12.73	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	TSPY4	P0CV99	314 aa		12.73	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	TSPY10	P0CW01	314 aa		12.73	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	RSPH4A	Q5TD94	716 aa		12.73	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	EHBP1L1	Q8N3D4	1523 aa		12.72	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	MYO5B	Q9ULV0	1848 aa		12.72	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	RIMS2	Q9UQ26	1411 aa		12.71	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	PIK3R4	Q99570	1358 aa		12.71	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	LAMC1	P11047	1609 aa		12.71	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	GIGYF1	O75420	1035 aa	Predicted RBP	12.71	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	UNC5CL	Q8IV45	518 aa		12.71	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	ARHGEF5	Q12774	1597 aa		12.71	□□□□□ -0.37
RUNX1T1-223	ENST00000520172	ADAMTS13	Q76LX8	1427 aa		12.71	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	CHD4	Q14839	1912 aa		12.7	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	SOS2	Q07890	1332 aa	Predicted RBP	12.7	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	AMOTL2	Q9Y2J4	779 aa		12.7	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	SPON1	Q9HCB6	807 aa		12.69	□□□□□ -0.38
RUNX1T1-223	ENST00000520172		A0A0G2JS52	829 aa		12.68	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	MYT1	Q01538	1121 aa		12.68	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	EZH2	Q15910	746 aa	Known RBP	12.68	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	DISP2	A7MBM2	1401 aa		12.68	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	PTPRU	Q92729	1446 aa		12.68	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	HDGF	P51858	240 aa	Known RBP	12.67	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	TNS1	Q9HBL0	1735 aa	Known RBP	12.67	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	SLIT2	O94813	1529 aa		12.67	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	GCC2	Q8IWJ2	1684 aa		12.67	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	C1orf167	Q5SNV9	1468 aa		12.65	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	RPRD2	Q5VT52	1461 aa	Known RBP	12.65	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	NALCN	Q8IZF0	1738 aa		12.65	□□□□□ -0.38
RUNX1T1-223	ENST00000520172	ADGRL3	Q9HAR2	1447 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms