RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 PREX1Q8TCU6 1659 aa37.18■■■■□ 3.54
COL13A1-212ENST00000520133 NRXN1Q9ULB1 1477 aa37.18■■■■□ 3.54
COL13A1-212ENST00000520133 PRKRIP1Q9H875 184 aaPredicted RBP37.18■■■■□ 3.54
COL13A1-212ENST00000520133 SCAF11Q99590 1463 aaKnown RBP37.18■■■■□ 3.54
COL13A1-212ENST00000520133 ADGRF5Q8IZF2 1346 aa37.16■■■■□ 3.54
COL13A1-212ENST00000520133 TESK2Q96S53 571 aa37.15■■■■□ 3.54
COL13A1-212ENST00000520133 SLC52A1Q9NWF4 448 aa37.15■■■■□ 3.54
COL13A1-212ENST00000520133 TMF1P82094 1093 aa37.1■■■■□ 3.53
COL13A1-212ENST00000520133 EIF3AQ14152 1382 aaKnown RBP37.1■■■■□ 3.53
COL13A1-212ENST00000520133 SCAF1Q9H7N4 1312 aaKnown RBP37.08■■■■□ 3.53
COL13A1-212ENST00000520133 CLTCQ00610 1675 aaKnown RBP37.07■■■■□ 3.53
COL13A1-212ENST00000520133 CFAP70Q5T0N1 1121 aa37.07■■■■□ 3.52
COL13A1-212ENST00000520133 IDI1Q13907 227 aa37.04■■■■□ 3.52
COL13A1-212ENST00000520133 DISP3Q9P2K9 1392 aa37.04■■■■□ 3.52
COL13A1-212ENST00000520133 SETBP1Q9Y6X0 1596 aa37.03■■■■□ 3.52
COL13A1-212ENST00000520133 PIK3C2GO75747 1445 aa37.02■■■■□ 3.52
COL13A1-212ENST00000520133 ERVK-7P63135 1459 aa37.02■■■■□ 3.52
COL13A1-212ENST00000520133 NEXMIFQ5QGS0 1516 aa36.99■■■■□ 3.51
COL13A1-212ENST00000520133 VGFO15240 615 aaPredicted RBP36.98■■■■□ 3.51
COL13A1-212ENST00000520133 SLC24A1O60721 1099 aa36.96■■■■□ 3.51
COL13A1-212ENST00000520133 MLECQ14165 292 aa36.96■■■■□ 3.51
COL13A1-212ENST00000520133 TMEM131LA2VDJ0 1609 aa36.96■■■■□ 3.51
COL13A1-212ENST00000520133 MYO5BQ9ULV0 1848 aa36.96■■■■□ 3.51
COL13A1-212ENST00000520133 CDCA8Q53HL2 280 aa36.95■■■■□ 3.51
COL13A1-212ENST00000520133 C14orf93Q9H972 538 aaKnown RBP36.95■■■■□ 3.51
COL13A1-212ENST00000520133 FBXO31Q5XUX0 539 aaPredicted RBP36.94■■■■□ 3.5
COL13A1-212ENST00000520133 GTF3C3Q9Y5Q9 886 aa36.93■■■■□ 3.5
COL13A1-212ENST00000520133 ESF1Q9H501 851 aaKnown RBP36.92■■■■□ 3.5
COL13A1-212ENST00000520133 SPATA31D1Q6ZQQ2 1576 aa36.91■■■■□ 3.5
COL13A1-212ENST00000520133 ZFYVE9O95405 1425 aa36.91■■■■□ 3.5
COL13A1-212ENST00000520133 KTN1Q86UP2 1357 aaKnown RBP36.9■■■■□ 3.5
COL13A1-212ENST00000520133 MRS2Q9HD23 443 aa36.88■■■■□ 3.49
COL13A1-212ENST00000520133 MYO3AQ8NEV4 1616 aa36.88■■■■□ 3.49
COL13A1-212ENST00000520133 ADGRB1O14514 1584 aa36.85■■■■□ 3.49
COL13A1-212ENST00000520133 CCDC184Q52MB2 194 aa36.83■■■■□ 3.49
COL13A1-212ENST00000520133 STAG3Q9UJ98 1225 aa36.81■■■■□ 3.48
COL13A1-212ENST00000520133 TRHP20396 242 aaPredicted RBP36.8■■■■□ 3.48
COL13A1-212ENST00000520133 RALBP1Q15311 655 aa36.8■■■■□ 3.48
COL13A1-212ENST00000520133 KDM5AP29375 1690 aaKnown RBP36.8■■■■□ 3.48
COL13A1-212ENST00000520133 SBNO2Q9Y2G9 1366 aa36.8■■■■□ 3.48
COL13A1-212ENST00000520133 NUTM2DQ5VT03 806 aaPredicted RBP36.79■■■■□ 3.48
COL13A1-212ENST00000520133 ZMYM3Q14202 1370 aa36.79■■■■□ 3.48
COL13A1-212ENST00000520133 CNGB1Q14028 1251 aaPredicted RBP36.78■■■■□ 3.48
COL13A1-212ENST00000520133 PER1O15534 1290 aaPredicted RBP36.78■■■■□ 3.48
COL13A1-212ENST00000520133 PANK3Q9H999 370 aa36.76■■■■□ 3.48
COL13A1-212ENST00000520133 CENPJQ9HC77 1338 aaPredicted RBP36.75■■■■□ 3.47
COL13A1-212ENST00000520133 TRAK1Q9UPV9 953 aa36.73■■■■□ 3.47
COL13A1-212ENST00000520133 TMEM132EQ6IEE7 984 aa36.72■■■■□ 3.47
COL13A1-212ENST00000520133 MYBBP1AQ9BQG0 1328 aaKnown RBP36.71■■■■□ 3.47
COL13A1-212ENST00000520133 QRICH2Q9H0J4 1663 aa36.7■■■■□ 3.47
COL13A1-212ENST00000520133 A2ML1A8K2U0 1454 aa36.69■■■■□ 3.46
COL13A1-212ENST00000520133 HNRNPUQ00839 825 aaKnown RBP eCLIP36.69■■■■□ 3.46
COL13A1-212ENST00000520133 FAM9BQ8IZU0 186 aa36.69■■■■□ 3.46
COL13A1-212ENST00000520133 MYOM1P52179 1685 aa36.68■■■■□ 3.46
COL13A1-212ENST00000520133 PARD3Q8TEW0 1356 aa36.67■■■■□ 3.46
COL13A1-212ENST00000520133 ARHGEF28Q8N1W1 1705 aaKnown RBP36.65■■■■□ 3.46
COL13A1-212ENST00000520133 BRD4O60885 1362 aaPredicted RBP36.63■■■■□ 3.45
COL13A1-212ENST00000520133 TMC1Q8TDI8 760 aa36.62■■■■□ 3.45
COL13A1-212ENST00000520133 KNSTRNQ9Y448 316 aa36.59■■■■□ 3.45
COL13A1-212ENST00000520133 TNRQ92752 1358 aa36.59■■■■□ 3.45
COL13A1-212ENST00000520133 RIMS2Q9UQ26 1411 aa36.59■■■■□ 3.45
COL13A1-212ENST00000520133 ASXL1Q8IXJ9 1541 aa36.57■■■■□ 3.44
COL13A1-212ENST00000520133 ALKQ9UM73 1620 aa36.56■■■■□ 3.44
COL13A1-212ENST00000520133 NLRP13Q86W25 1043 aa36.55■■■■□ 3.44
COL13A1-212ENST00000520133 CC2D1BQ5T0F9 858 aaKnown RBP36.55■■■■□ 3.44
COL13A1-212ENST00000520133 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.52■■■■□ 3.44
COL13A1-212ENST00000520133 PNISRQ8TF01 805 aaKnown RBP36.5■■■■□ 3.43
COL13A1-212ENST00000520133 HDGFP51858 240 aaKnown RBP36.49■■■■□ 3.43
COL13A1-212ENST00000520133 YTHDC2Q9H6S0 1430 aaKnown RBP36.49■■■■□ 3.43
COL13A1-212ENST00000520133 PUS7Q96PZ0 661 aaKnown RBP36.48■■■■□ 3.43
COL13A1-212ENST00000520133 FER1L4A9Z1Z3 1794 aa36.47■■■■□ 3.43
COL13A1-212ENST00000520133 NPC1L1Q9UHC9 1359 aa36.47■■■■□ 3.43
COL13A1-212ENST00000520133 EVC2Q86UK5 1308 aa36.46■■■■□ 3.43
COL13A1-212ENST00000520133 STK26Q9P289 416 aa36.45■■■■□ 3.43
COL13A1-212ENST00000520133 AMER1Q5JTC6 1135 aaPredicted RBP36.45■■■■□ 3.43
COL13A1-212ENST00000520133 DNAJC5Q9H3Z4 198 aa36.45■■■■□ 3.43
COL13A1-212ENST00000520133 SENP3Q9H4L4 574 aaPredicted RBP36.45■■■■□ 3.43
COL13A1-212ENST00000520133 UBR1Q8IWV7 1749 aa36.45■■■■□ 3.42
COL13A1-212ENST00000520133 ZBED9Q6R2W3 1325 aa36.44■■■■□ 3.42
COL13A1-212ENST00000520133 NLRP1Q9C000 1473 aa36.42■■■■□ 3.42
COL13A1-212ENST00000520133 C3P01024 1663 aa36.42■■■■□ 3.42
COL13A1-212ENST00000520133 PTPRMP28827 1452 aa36.42■■■■□ 3.42
COL13A1-212ENST00000520133 SETD1AO15047 1707 aaKnown RBP36.4■■■■□ 3.42
COL13A1-212ENST00000520133 TULP4Q9NRJ4 1543 aa36.39■■■■□ 3.42
COL13A1-212ENST00000520133 LRPPRCP42704 1394 aaKnown RBP36.39■■■■□ 3.42
COL13A1-212ENST00000520133 POGKQ9P215 609 aa36.35■■■■□ 3.41
COL13A1-212ENST00000520133 TMEM2Q9UHN6 1383 aa36.35■■■■□ 3.41
COL13A1-212ENST00000520133 NRXN3Q9Y4C0 1643 aa36.35■■■■□ 3.41
COL13A1-212ENST00000520133 DLC1Q96QB1 1528 aa36.34■■■■□ 3.41
COL13A1-212ENST00000520133 PRAM1Q96QH2 718 aa36.33■■■■□ 3.41
COL13A1-212ENST00000520133 CEBPAP49715 358 aaPredicted RBP36.32■■■■□ 3.41
COL13A1-212ENST00000520133 SAFB2Q14151 953 aaKnown RBP eCLIP36.32■■■■□ 3.41
COL13A1-212ENST00000520133 CARD14Q9BXL6 1004 aa36.3■■■■□ 3.4
COL13A1-212ENST00000520133 SLC12A5Q9H2X9 1139 aa36.28■■■■□ 3.4
COL13A1-212ENST00000520133 PPP2R1AP30153 589 aa36.27■■■■□ 3.4
COL13A1-212ENST00000520133 ABCC11Q96J66 1382 aa36.26■■■■□ 3.39
COL13A1-212ENST00000520133 NINLQ9Y2I6 1382 aa36.26■■■■□ 3.39
COL13A1-212ENST00000520133 CABP2Q9NPB3 220 aa36.24■■■■□ 3.39
COL13A1-212ENST00000520133 MINK1Q8N4C8 1332 aaPredicted RBP36.23■■■■□ 3.39
COL13A1-212ENST00000520133 NSD3Q9BZ95 1437 aa36.22■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms