RNA–Protein interactions for RNA: ENST00000519589.1

KCNQ3-203, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 2

Gene KCNQ3, Length 3,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-203ENST00000519589 NEO1Q92859 1461 aa11.05□□□□□ -0.64
KCNQ3-203ENST00000519589 PIP4K2BP78356 416 aa11.05□□□□□ -0.64
KCNQ3-203ENST00000519589 ZNF518AQ6AHZ1 1483 aa11.05□□□□□ -0.64
KCNQ3-203ENST00000519589 KIF13AQ9H1H9 1805 aa11.05□□□□□ -0.64
KCNQ3-203ENST00000519589 L1TD1Q5T7N2 865 aaKnown RBP11.04□□□□□ -0.64
KCNQ3-203ENST00000519589 TMC1Q8TDI8 760 aa11.04□□□□□ -0.64
KCNQ3-203ENST00000519589 KANK1Q14678 1352 aa11.04□□□□□ -0.64
KCNQ3-203ENST00000519589 NLRP1Q9C000 1473 aa11.04□□□□□ -0.64
KCNQ3-203ENST00000519589 PANK2Q9BZ23 570 aa11.03□□□□□ -0.64
KCNQ3-203ENST00000519589 USP19O94966 1318 aa11.03□□□□□ -0.64
KCNQ3-203ENST00000519589 ANKRD50Q9ULJ7 1429 aa11.03□□□□□ -0.64
KCNQ3-203ENST00000519589 NCKAP5LQ9HCH0 1330 aa11.03□□□□□ -0.64
KCNQ3-203ENST00000519589 SLC26A8Q96RN1 970 aa11.03□□□□□ -0.64
KCNQ3-203ENST00000519589 BCL11BQ9C0K0 894 aaPredicted RBP11.03□□□□□ -0.64
KCNQ3-203ENST00000519589 PNISRQ8TF01 805 aaKnown RBP11.02□□□□□ -0.65
KCNQ3-203ENST00000519589 ANTXR1Q9H6X2 564 aa11.02□□□□□ -0.65
KCNQ3-203ENST00000519589 PDIA4P13667 645 aaKnown RBP11.01□□□□□ -0.65
KCNQ3-203ENST00000519589 GCC2Q8IWJ2 1684 aa11.01□□□□□ -0.65
KCNQ3-203ENST00000519589 KIF7Q2M1P5 1343 aa11.01□□□□□ -0.65
KCNQ3-203ENST00000519589 TPM2P07951 284 aa11.01□□□□□ -0.65
KCNQ3-203ENST00000519589 ATP10AO60312 1499 aa11□□□□□ -0.65
KCNQ3-203ENST00000519589 E9PCH4 1651 aa11□□□□□ -0.65
KCNQ3-203ENST00000519589 TXNDC2Q86VQ3 553 aa11□□□□□ -0.65
KCNQ3-203ENST00000519589 EID1Q9Y6B2 187 aa11□□□□□ -0.65
KCNQ3-203ENST00000519589 GTF2E1P29083 439 aaPredicted RBP10.99□□□□□ -0.65
KCNQ3-203ENST00000519589 ARHGEF12Q9NZN5 1544 aa10.99□□□□□ -0.65
KCNQ3-203ENST00000519589 ZMYM3Q14202 1370 aa10.99□□□□□ -0.65
KCNQ3-203ENST00000519589 ZFYVE16Q7Z3T8 1539 aa10.99□□□□□ -0.65
KCNQ3-203ENST00000519589 RIPK4P57078 832 aa10.98□□□□□ -0.65
KCNQ3-203ENST00000519589 NUTM2FA1L443 756 aa10.98□□□□□ -0.65
KCNQ3-203ENST00000519589 SAFB2Q14151 953 aaKnown RBP eCLIP10.97□□□□□ -0.65
KCNQ3-203ENST00000519589 CCDC141Q6ZP82 1450 aa10.97□□□□□ -0.65
KCNQ3-203ENST00000519589 A2MP01023 1474 aa10.97□□□□□ -0.65
KCNQ3-203ENST00000519589 PLEKHH2Q8IVE3 1493 aa10.97□□□□□ -0.65
KCNQ3-203ENST00000519589 CARD11Q9BXL7 1154 aa10.97□□□□□ -0.65
KCNQ3-203ENST00000519589 STK26Q9P289 416 aa10.96□□□□□ -0.65
KCNQ3-203ENST00000519589 RCAN3Q9UKA8 241 aa10.96□□□□□ -0.65
KCNQ3-203ENST00000519589 GLI2P10070 1586 aa10.96□□□□□ -0.65
KCNQ3-203ENST00000519589 FAM161AQ3B820 660 aa10.96□□□□□ -0.66
KCNQ3-203ENST00000519589 THEMISQ8N1K5 641 aaPredicted RBP10.96□□□□□ -0.66
KCNQ3-203ENST00000519589 KTN1Q86UP2 1357 aaKnown RBP10.96□□□□□ -0.66
KCNQ3-203ENST00000519589 ESPNB1AK53 854 aa10.96□□□□□ -0.66
KCNQ3-203ENST00000519589 ANKLE2Q86XL3 938 aa10.96□□□□□ -0.66
KCNQ3-203ENST00000519589 TCOF1Q13428 1488 aaKnown RBP10.95□□□□□ -0.66
KCNQ3-203ENST00000519589 SMAP1Q8IYB5 467 aaPredicted RBP10.95□□□□□ -0.66
KCNQ3-203ENST00000519589 ABCA9Q8IUA7 1624 aa10.95□□□□□ -0.66
KCNQ3-203ENST00000519589 CDC42BPAQ5VT25 1732 aa10.95□□□□□ -0.66
KCNQ3-203ENST00000519589 STAC3Q96MF2 364 aa10.94□□□□□ -0.66
KCNQ3-203ENST00000519589 MBD5Q9P267 1494 aa10.94□□□□□ -0.66
KCNQ3-203ENST00000519589 IDI1Q13907 227 aa10.93□□□□□ -0.66
KCNQ3-203ENST00000519589 SAMD9LQ8IVG5 1584 aa10.93□□□□□ -0.66
KCNQ3-203ENST00000519589 ARAP3Q8WWN8 1544 aa10.93□□□□□ -0.66
KCNQ3-203ENST00000519589 UBAP1LF5GYI3 381 aa10.93□□□□□ -0.66
KCNQ3-203ENST00000519589 PPP6R1Q9UPN7 881 aa10.93□□□□□ -0.66
KCNQ3-203ENST00000519589 CFAP65Q6ZU64 1925 aaKnown RBP10.93□□□□□ -0.66
KCNQ3-203ENST00000519589 PTPRMP28827 1452 aa10.92□□□□□ -0.66
KCNQ3-203ENST00000519589 GOLGA6L3A6NEY3 463 aa10.92□□□□□ -0.66
KCNQ3-203ENST00000519589 NBPF8Q3BBV2 869 aa10.92□□□□□ -0.66
KCNQ3-203ENST00000519589 KDM5CP41229 1560 aa10.92□□□□□ -0.66
KCNQ3-203ENST00000519589 MAP3K4Q9Y6R4 1608 aa10.92□□□□□ -0.66
KCNQ3-203ENST00000519589 ITSN2Q9NZM3 1697 aa10.91□□□□□ -0.66
KCNQ3-203ENST00000519589 MYO5CQ9NQX4 1742 aa10.91□□□□□ -0.66
KCNQ3-203ENST00000519589 UHRF1BP1Q6BDS2 1440 aa10.91□□□□□ -0.66
KCNQ3-203ENST00000519589 TERF1P54274 439 aa10.91□□□□□ -0.66
KCNQ3-203ENST00000519589 CRBNQ96SW2 442 aa10.91□□□□□ -0.66
KCNQ3-203ENST00000519589 UTP14CQ5TAP6 766 aaKnown RBP10.9□□□□□ -0.66
KCNQ3-203ENST00000519589 CDC42BPBQ9Y5S2 1711 aa10.9□□□□□ -0.66
KCNQ3-203ENST00000519589 ROCK1Q13464 1354 aa10.9□□□□□ -0.66
KCNQ3-203ENST00000519589 KIAA1107Q9UPP5 1409 aa10.9□□□□□ -0.66
KCNQ3-203ENST00000519589 LMOD2Q6P5Q4 547 aa10.9□□□□□ -0.66
KCNQ3-203ENST00000519589 TNRQ92752 1358 aa10.89□□□□□ -0.67
KCNQ3-203ENST00000519589 DNMT1P26358 1616 aaKnown RBP10.89□□□□□ -0.67
KCNQ3-203ENST00000519589 ZMYM4Q5VZL5 1548 aa10.89□□□□□ -0.67
KCNQ3-203ENST00000519589 DMRT2Q9Y5R5 561 aa10.89□□□□□ -0.67
KCNQ3-203ENST00000519589 ZNF335Q9H4Z2 1342 aaPredicted RBP10.89□□□□□ -0.67
KCNQ3-203ENST00000519589 MRE11P49959 708 aa10.88□□□□□ -0.67
KCNQ3-203ENST00000519589 KIAA1211Q6ZU35 1233 aa10.88□□□□□ -0.67
KCNQ3-203ENST00000519589 PROSER2Q86WR7 435 aaPredicted RBP10.88□□□□□ -0.67
KCNQ3-203ENST00000519589 RPRD2Q5VT52 1461 aaKnown RBP10.88□□□□□ -0.67
KCNQ3-203ENST00000519589 ATP7AQ04656 1500 aa10.88□□□□□ -0.67
KCNQ3-203ENST00000519589 DMTNQ08495 405 aa10.88□□□□□ -0.67
KCNQ3-203ENST00000519589 NCBP3Q53F19 620 aaKnown RBP10.88□□□□□ -0.67
KCNQ3-203ENST00000519589 BBXQ8WY36 941 aaPredicted RBP10.88□□□□□ -0.67
KCNQ3-203ENST00000519589 NAP1L2Q9ULW6 460 aaPredicted RBP10.88□□□□□ -0.67
KCNQ3-203ENST00000519589 CENPQQ7L2Z9 268 aaPredicted RBP10.87□□□□□ -0.67
KCNQ3-203ENST00000519589 PLIN1O60240 522 aa10.87□□□□□ -0.67
KCNQ3-203ENST00000519589 C20orf194Q5TEA3 1177 aa10.87□□□□□ -0.67
KCNQ3-203ENST00000519589 BRD4O60885 1362 aaPredicted RBP10.87□□□□□ -0.67
KCNQ3-203ENST00000519589 OFD1O75665 1012 aa10.86□□□□□ -0.67
KCNQ3-203ENST00000519589 ZSCAN20P17040 1043 aaPredicted RBP10.86□□□□□ -0.67
KCNQ3-203ENST00000519589 USP47Q96K76 1375 aa10.86□□□□□ -0.67
KCNQ3-203ENST00000519589 PREX2Q70Z35 1606 aa10.86□□□□□ -0.67
KCNQ3-203ENST00000519589 HDGFP51858 240 aaKnown RBP10.86□□□□□ -0.67
KCNQ3-203ENST00000519589 ABCC1P33527 1531 aa10.86□□□□□ -0.67
KCNQ3-203ENST00000519589 PDE3BQ13370 1112 aa10.86□□□□□ -0.67
KCNQ3-203ENST00000519589 BLMP54132 1417 aaPredicted RBP10.86□□□□□ -0.67
KCNQ3-203ENST00000519589 GRPEL1Q9HAV7 217 aa10.85□□□□□ -0.67
KCNQ3-203ENST00000519589 TMEM51Q9NW97 253 aa10.85□□□□□ -0.67
KCNQ3-203ENST00000519589 MAGI2Q86UL8 1455 aa10.85□□□□□ -0.67
KCNQ3-203ENST00000519589 TAF7LQ5H9L4 462 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms