RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 ANKRD30BQ9BXX2 1392 aa10.03□□□□□ -0.8
SLIT3-205ENST00000519486 UGGT2Q9NYU1 1516 aa10.02□□□□□ -0.8
SLIT3-205ENST00000519486 HDGFL2Q7Z4V5 671 aaPredicted RBP10.02□□□□□ -0.81
SLIT3-205ENST00000519486 SLC26A8Q96RN1 970 aa10.02□□□□□ -0.81
SLIT3-205ENST00000519486 PNNQ9H307 717 aaKnown RBP10.02□□□□□ -0.81
SLIT3-205ENST00000519486 PLIN1O60240 522 aa10.02□□□□□ -0.81
SLIT3-205ENST00000519486 PBRM1Q86U86 1689 aa10.02□□□□□ -0.81
SLIT3-205ENST00000519486 ATP10AO60312 1499 aa10.02□□□□□ -0.81
SLIT3-205ENST00000519486 GPRASP1Q5JY77 1395 aa10.01□□□□□ -0.81
SLIT3-205ENST00000519486 KIF14Q15058 1648 aa10.01□□□□□ -0.81
SLIT3-205ENST00000519486 EXOC6Q8TAG9 804 aa10.01□□□□□ -0.81
SLIT3-205ENST00000519486 A0A0U1RQG5 324 aaPredicted RBP10.01□□□□□ -0.81
SLIT3-205ENST00000519486 NBPF1Q3BBV0 1214 aa10.01□□□□□ -0.81
SLIT3-205ENST00000519486 ABCC5O15440 1437 aa10.01□□□□□ -0.81
SLIT3-205ENST00000519486 ATP10BO94823 1461 aa10.01□□□□□ -0.81
SLIT3-205ENST00000519486 NUTM2FA1L443 756 aa10□□□□□ -0.81
SLIT3-205ENST00000519486 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
SLIT3-205ENST00000519486 FRAT1Q92837 279 aaPredicted RBP9.99□□□□□ -0.81
SLIT3-205ENST00000519486 ZMYND15Q9H091 742 aa9.99□□□□□ -0.81
SLIT3-205ENST00000519486 ABCA5Q8WWZ7 1642 aa9.98□□□□□ -0.81
SLIT3-205ENST00000519486 NCKAP5LQ9HCH0 1330 aa9.98□□□□□ -0.81
SLIT3-205ENST00000519486 CCDC146Q8IYE0 955 aa9.98□□□□□ -0.81
SLIT3-205ENST00000519486 PPP1R1BQ9UD71 204 aaPredicted RBP9.98□□□□□ -0.81
SLIT3-205ENST00000519486 ESCO1Q5FWF5 840 aa9.98□□□□□ -0.81
SLIT3-205ENST00000519486 ROCK1Q13464 1354 aa9.98□□□□□ -0.81
SLIT3-205ENST00000519486 PNISRQ8TF01 805 aaKnown RBP9.97□□□□□ -0.81
SLIT3-205ENST00000519486 RRP1P56182 461 aaKnown RBP9.97□□□□□ -0.81
SLIT3-205ENST00000519486 CFAP43Q8NDM7 1665 aa9.97□□□□□ -0.81
SLIT3-205ENST00000519486 STAC3Q96MF2 364 aa9.97□□□□□ -0.81
SLIT3-205ENST00000519486 LRPPRCP42704 1394 aaKnown RBP9.97□□□□□ -0.81
SLIT3-205ENST00000519486 MAGI2Q86UL8 1455 aa9.97□□□□□ -0.81
SLIT3-205ENST00000519486 SOX12O15370 315 aa9.96□□□□□ -0.81
SLIT3-205ENST00000519486 PDE3BQ13370 1112 aa9.96□□□□□ -0.82
SLIT3-205ENST00000519486 L1TD1Q5T7N2 865 aaKnown RBP9.96□□□□□ -0.82
SLIT3-205ENST00000519486 CDCA7LQ96GN5 454 aa9.96□□□□□ -0.82
SLIT3-205ENST00000519486 TMX4Q9H1E5 349 aaPredicted RBP9.96□□□□□ -0.82
SLIT3-205ENST00000519486 UPF2Q9HAU5 1272 aaKnown RBP9.96□□□□□ -0.82
SLIT3-205ENST00000519486 DHX29Q7Z478 1369 aaKnown RBP9.95□□□□□ -0.82
SLIT3-205ENST00000519486 NCOA1Q15788 1441 aa9.95□□□□□ -0.82
SLIT3-205ENST00000519486 KIAA0556O60303 1618 aa9.95□□□□□ -0.82
SLIT3-205ENST00000519486 CCDC141Q6ZP82 1450 aa9.95□□□□□ -0.82
SLIT3-205ENST00000519486 ZMYM3Q14202 1370 aa9.95□□□□□ -0.82
SLIT3-205ENST00000519486 RPRD2Q5VT52 1461 aaKnown RBP9.95□□□□□ -0.82
SLIT3-205ENST00000519486 TCERG1O14776 1098 aaKnown RBP9.94□□□□□ -0.82
SLIT3-205ENST00000519486 TRIM44Q96DX7 344 aaPredicted RBP9.94□□□□□ -0.82
SLIT3-205ENST00000519486 ZFYVE16Q7Z3T8 1539 aa9.94□□□□□ -0.82
SLIT3-205ENST00000519486 MORC1Q86VD1 984 aa9.94□□□□□ -0.82
SLIT3-205ENST00000519486 KLHL34Q8N239 644 aa9.94□□□□□ -0.82
SLIT3-205ENST00000519486 CFAP53Q96M91 514 aa9.94□□□□□ -0.82
SLIT3-205ENST00000519486 CTTNBP2Q8WZ74 1663 aa9.94□□□□□ -0.82
SLIT3-205ENST00000519486 EIF3AQ14152 1382 aaKnown RBP9.94□□□□□ -0.82
SLIT3-205ENST00000519486 FAM43AQ8N2R8 423 aa9.94□□□□□ -0.82
SLIT3-205ENST00000519486 GOLGA2Q08379 1002 aa9.93□□□□□ -0.82
SLIT3-205ENST00000519486 KDM5BQ9UGL1 1544 aa9.93□□□□□ -0.82
SLIT3-205ENST00000519486 ANP32BQ92688 251 aaKnown RBP9.93□□□□□ -0.82
SLIT3-205ENST00000519486 A2MP01023 1474 aa9.93□□□□□ -0.82
SLIT3-205ENST00000519486 TERF2IPQ9NYB0 399 aa9.93□□□□□ -0.82
SLIT3-205ENST00000519486 CLASP1Q7Z460 1538 aa9.93□□□□□ -0.82
SLIT3-205ENST00000519486 CAMSAP2Q08AD1 1489 aa9.93□□□□□ -0.82
SLIT3-205ENST00000519486 ADAMTS2O95450 1211 aa9.93□□□□□ -0.82
SLIT3-205ENST00000519486 TRAPPC8Q9Y2L5 1435 aa9.92□□□□□ -0.82
SLIT3-205ENST00000519486 CRBNQ96SW2 442 aa9.92□□□□□ -0.82
SLIT3-205ENST00000519486 U2SURPO15042 1029 aaKnown RBP9.92□□□□□ -0.82
SLIT3-205ENST00000519486 ZNF772Q68DY9 489 aaPredicted RBP9.92□□□□□ -0.82
SLIT3-205ENST00000519486 FBXO31Q5XUX0 539 aaPredicted RBP9.91□□□□□ -0.82
SLIT3-205ENST00000519486 LRRC59Q96AG4 307 aaKnown RBP9.91□□□□□ -0.82
SLIT3-205ENST00000519486 PRDM11Q9NQV5 511 aa9.91□□□□□ -0.82
SLIT3-205ENST00000519486 RAPGEF6Q8TEU7 1601 aa9.91□□□□□ -0.82
SLIT3-205ENST00000519486 MAGI3Q5TCQ9 1506 aa9.91□□□□□ -0.82
SLIT3-205ENST00000519486 TRAK1Q9UPV9 953 aa9.91□□□□□ -0.82
SLIT3-205ENST00000519486 BRD4O60885 1362 aaPredicted RBP9.91□□□□□ -0.82
SLIT3-205ENST00000519486 CFAP74Q9C0B2 1584 aa9.91□□□□□ -0.82
SLIT3-205ENST00000519486 PDE4AP27815 886 aa9.91□□□□□ -0.82
SLIT3-205ENST00000519486 ADAMTS8Q9UP79 889 aa9.9□□□□□ -0.82
SLIT3-205ENST00000519486 TSPOAP1O95153 1857 aa9.9□□□□□ -0.82
SLIT3-205ENST00000519486 RPGRIP1LQ68CZ1 1315 aa9.9□□□□□ -0.82
SLIT3-205ENST00000519486 APAF1O14727 1248 aa9.9□□□□□ -0.82
SLIT3-205ENST00000519486 NCLP19338 710 aaKnown RBP9.9□□□□□ -0.83
SLIT3-205ENST00000519486 FTSJ3Q8IY81 847 aaKnown RBP9.89□□□□□ -0.83
SLIT3-205ENST00000519486 RRP7AQ9Y3A4 280 aaKnown RBP9.89□□□□□ -0.83
SLIT3-205ENST00000519486 NUP153P49790 1475 aaKnown RBP9.89□□□□□ -0.83
SLIT3-205ENST00000519486 NBPF14Q5TI25 921 aa9.89□□□□□ -0.83
SLIT3-205ENST00000519486 C19orf44Q9H6X5 657 aa9.89□□□□□ -0.83
SLIT3-205ENST00000519486 RRP9O43818 475 aaKnown RBP9.88□□□□□ -0.83
SLIT3-205ENST00000519486 YEATS2Q9ULM3 1422 aa9.88□□□□□ -0.83
SLIT3-205ENST00000519486 GPATCH8Q9UKJ3 1502 aaKnown RBP9.88□□□□□ -0.83
SLIT3-205ENST00000519486 AMPHP49418 695 aa9.88□□□□□ -0.83
SLIT3-205ENST00000519486 SMG6Q86US8 1419 aaKnown RBP9.87□□□□□ -0.83
SLIT3-205ENST00000519486 U2AF1L5P0DN76 240 aaPredicted RBP9.87□□□□□ -0.83
SLIT3-205ENST00000519486 U2AF1Q01081 240 aaKnown RBP eCLIP9.87□□□□□ -0.83
SLIT3-205ENST00000519486 C8orf37Q96NL8 207 aa9.87□□□□□ -0.83
SLIT3-205ENST00000519486 TCOF1Q13428 1488 aaKnown RBP9.87□□□□□ -0.83
SLIT3-205ENST00000519486 BECN1Q14457 450 aa9.87□□□□□ -0.83
SLIT3-205ENST00000519486 CLUAP1Q96AJ1 413 aa9.87□□□□□ -0.83
SLIT3-205ENST00000519486 AMOTL2Q9Y2J4 779 aa9.87□□□□□ -0.83
SLIT3-205ENST00000519486 SLC4A3P48751 1232 aa9.87□□□□□ -0.83
SLIT3-205ENST00000519486 NFKBIBQ15653 356 aa9.87□□□□□ -0.83
SLIT3-205ENST00000519486 KCNA6P17658 529 aa9.86□□□□□ -0.83
SLIT3-205ENST00000519486 NPHP3Q7Z494 1330 aa9.86□□□□□ -0.83
SLIT3-205ENST00000519486 MAPK8IP3Q9UPT6 1336 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms