RNA–Protein interactions for RNA: ENST00000519442.1

SOX30-203, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX30, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-203ENST00000519442 CCDC7Q96M83 1385 aa18.64■□□□□ 0.57
SOX30-203ENST00000519442 IFT172Q9UG01 1749 aa18.64■□□□□ 0.57
SOX30-203ENST00000519442 C11orf95C9JLR9 678 aaPredicted RBP18.63■□□□□ 0.57
SOX30-203ENST00000519442 ZMYM3Q14202 1370 aa18.63■□□□□ 0.57
SOX30-203ENST00000519442 ADGRF5Q8IZF2 1346 aa18.63■□□□□ 0.57
SOX30-203ENST00000519442 ST20-MTHFSA0A0A6YYL1 179 aa18.63■□□□□ 0.57
SOX30-203ENST00000519442 SPATA31D1Q6ZQQ2 1576 aa18.62■□□□□ 0.57
SOX30-203ENST00000519442 NRXN1Q9ULB1 1477 aa18.61■□□□□ 0.57
SOX30-203ENST00000519442 KIF7Q2M1P5 1343 aa18.61■□□□□ 0.57
SOX30-203ENST00000519442 PPLO60437 1756 aa18.59■□□□□ 0.57
SOX30-203ENST00000519442 KIAA1210Q9ULL0 1709 aa18.59■□□□□ 0.57
SOX30-203ENST00000519442 POLR1AO95602 1720 aaPredicted RBP18.58■□□□□ 0.56
SOX30-203ENST00000519442 STAG3Q9UJ98 1225 aa18.57■□□□□ 0.56
SOX30-203ENST00000519442 NEXMIFQ5QGS0 1516 aa18.57■□□□□ 0.56
SOX30-203ENST00000519442 TMEM131LA2VDJ0 1609 aa18.57■□□□□ 0.56
SOX30-203ENST00000519442 PIK3C2GO75747 1445 aa18.57■□□□□ 0.56
SOX30-203ENST00000519442 VGFO15240 615 aaPredicted RBP18.57■□□□□ 0.56
SOX30-203ENST00000519442 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
SOX30-203ENST00000519442 SCAF11Q99590 1463 aaKnown RBP18.56■□□□□ 0.56
SOX30-203ENST00000519442 ANP32CO43423 234 aa18.55■□□□□ 0.56
SOX30-203ENST00000519442 POLR3GLQ9BT43 218 aa18.54■□□□□ 0.56
SOX30-203ENST00000519442 NUTM2DQ5VT03 806 aaPredicted RBP18.53■□□□□ 0.56
SOX30-203ENST00000519442 IQGAP1P46940 1657 aa18.52■□□□□ 0.56
SOX30-203ENST00000519442 EIF3AQ14152 1382 aaKnown RBP18.52■□□□□ 0.56
SOX30-203ENST00000519442 ZFYVE9O95405 1425 aa18.52■□□□□ 0.56
SOX30-203ENST00000519442 TNRQ92752 1358 aa18.51■□□□□ 0.55
SOX30-203ENST00000519442 C14orf93Q9H972 538 aaKnown RBP18.51■□□□□ 0.55
SOX30-203ENST00000519442 SETBP1Q9Y6X0 1596 aa18.5■□□□□ 0.55
SOX30-203ENST00000519442 TESK2Q96S53 571 aa18.5■□□□□ 0.55
SOX30-203ENST00000519442 MYO5BQ9ULV0 1848 aa18.49■□□□□ 0.55
SOX30-203ENST00000519442 A2ML1A8K2U0 1454 aa18.49■□□□□ 0.55
SOX30-203ENST00000519442 TMF1P82094 1093 aa18.48■□□□□ 0.55
SOX30-203ENST00000519442 FER1L4A9Z1Z3 1794 aa18.47■□□□□ 0.55
SOX30-203ENST00000519442 CEBPAP49715 358 aaPredicted RBP18.45■□□□□ 0.54
SOX30-203ENST00000519442 DISP3Q9P2K9 1392 aa18.44■□□□□ 0.54
SOX30-203ENST00000519442 RIMS2Q9UQ26 1411 aa18.44■□□□□ 0.54
SOX30-203ENST00000519442 ADGRB1O14514 1584 aa18.44■□□□□ 0.54
SOX30-203ENST00000519442 C3P01024 1663 aa18.43■□□□□ 0.54
SOX30-203ENST00000519442 NLRP1Q9C000 1473 aa18.42■□□□□ 0.54
SOX30-203ENST00000519442 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
SOX30-203ENST00000519442 TMEM132EQ6IEE7 984 aa18.42■□□□□ 0.54
SOX30-203ENST00000519442 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.41■□□□□ 0.54
SOX30-203ENST00000519442 CCER2I3L3R5 266 aa18.41■□□□□ 0.54
SOX30-203ENST00000519442 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
SOX30-203ENST00000519442 HDGFP51858 240 aaKnown RBP18.4■□□□□ 0.54
SOX30-203ENST00000519442 CDCA8Q53HL2 280 aa18.4■□□□□ 0.54
SOX30-203ENST00000519442 YTHDC1Q96MU7 727 aaKnown RBP18.4■□□□□ 0.54
SOX30-203ENST00000519442 KDM5AP29375 1690 aaKnown RBP18.4■□□□□ 0.54
SOX30-203ENST00000519442 CENPJQ9HC77 1338 aaPredicted RBP18.39■□□□□ 0.53
SOX30-203ENST00000519442 MYO3AQ8NEV4 1616 aa18.38■□□□□ 0.53
SOX30-203ENST00000519442 SBNO2Q9Y2G9 1366 aa18.37■□□□□ 0.53
SOX30-203ENST00000519442 UBR1Q8IWV7 1749 aa18.36■□□□□ 0.53
SOX30-203ENST00000519442 TMEM2Q9UHN6 1383 aa18.36■□□□□ 0.53
SOX30-203ENST00000519442 ALKQ9UM73 1620 aa18.35■□□□□ 0.53
SOX30-203ENST00000519442 PRKRIP1Q9H875 184 aaPredicted RBP18.35■□□□□ 0.53
SOX30-203ENST00000519442 ASXL1Q8IXJ9 1541 aa18.35■□□□□ 0.53
SOX30-203ENST00000519442 ADAMTSL3P82987 1691 aa18.34■□□□□ 0.53
SOX30-203ENST00000519442 RIMS1Q86UR5 1692 aaKnown RBP18.34■□□□□ 0.53
SOX30-203ENST00000519442 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
SOX30-203ENST00000519442 STK26Q9P289 416 aa18.31■□□□□ 0.52
SOX30-203ENST00000519442 YTHDC2Q9H6S0 1430 aaKnown RBP18.31■□□□□ 0.52
SOX30-203ENST00000519442 ARHGEF28Q8N1W1 1705 aaKnown RBP18.3■□□□□ 0.52
SOX30-203ENST00000519442 QRICH2Q9H0J4 1663 aa18.3■□□□□ 0.52
SOX30-203ENST00000519442 PTPRMP28827 1452 aa18.29■□□□□ 0.52
SOX30-203ENST00000519442 ADRA2BP18089 450 aa18.28■□□□□ 0.52
SOX30-203ENST00000519442 BCANQ96GW7 911 aa18.28■□□□□ 0.52
SOX30-203ENST00000519442 PANK3Q9H999 370 aa18.28■□□□□ 0.52
SOX30-203ENST00000519442 THEMISQ8N1K5 641 aaPredicted RBP18.28■□□□□ 0.52
SOX30-203ENST00000519442 EID1Q9Y6B2 187 aa18.28■□□□□ 0.52
SOX30-203ENST00000519442 NRXN3Q9Y4C0 1643 aa18.27■□□□□ 0.52
SOX30-203ENST00000519442 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.52
SOX30-203ENST00000519442 TXNDC2Q86VQ3 553 aa18.26■□□□□ 0.51
SOX30-203ENST00000519442 SLIT1O75093 1534 aa18.26■□□□□ 0.51
SOX30-203ENST00000519442 LRPPRCP42704 1394 aaKnown RBP18.25■□□□□ 0.51
SOX30-203ENST00000519442 PLEKHG1Q9ULL1 1385 aa18.25■□□□□ 0.51
SOX30-203ENST00000519442 ARHGAP23Q9P227 1491 aa18.25■□□□□ 0.51
SOX30-203ENST00000519442 SETD1AO15047 1707 aaKnown RBP18.25■□□□□ 0.51
SOX30-203ENST00000519442 PER1O15534 1290 aaPredicted RBP18.25■□□□□ 0.51
SOX30-203ENST00000519442 LTKP29376 864 aa18.25■□□□□ 0.51
SOX30-203ENST00000519442 EVC2Q86UK5 1308 aa18.25■□□□□ 0.51
SOX30-203ENST00000519442 POGKQ9P215 609 aa18.25■□□□□ 0.51
SOX30-203ENST00000519442 SAFB2Q14151 953 aaKnown RBP eCLIP18.24■□□□□ 0.51
SOX30-203ENST00000519442 PRAM1Q96QH2 718 aa18.24■□□□□ 0.51
SOX30-203ENST00000519442 CEP170BQ9Y4F5 1589 aaPredicted RBP18.23■□□□□ 0.51
SOX30-203ENST00000519442 KTN1Q86UP2 1357 aaKnown RBP18.23■□□□□ 0.51
SOX30-203ENST00000519442 KDM4FA0A1W2PPD8 638 aa18.23■□□□□ 0.51
SOX30-203ENST00000519442 DLC1Q96QB1 1528 aa18.23■□□□□ 0.51
SOX30-203ENST00000519442 METP08581 1390 aa18.22■□□□□ 0.51
SOX30-203ENST00000519442 ABCC11Q96J66 1382 aa18.22■□□□□ 0.51
SOX30-203ENST00000519442 MYOM1P52179 1685 aa18.22■□□□□ 0.51
SOX30-203ENST00000519442 RALBP1Q15311 655 aa18.22■□□□□ 0.51
SOX30-203ENST00000519442 PUS7Q96PZ0 661 aaKnown RBP18.21■□□□□ 0.51
SOX30-203ENST00000519442 ADAMTS13Q76LX8 1427 aa18.21■□□□□ 0.5
SOX30-203ENST00000519442 TULP4Q9NRJ4 1543 aa18.2■□□□□ 0.5
SOX30-203ENST00000519442 KNSTRNQ9Y448 316 aa18.2■□□□□ 0.5
SOX30-203ENST00000519442 MRS2Q9HD23 443 aa18.19■□□□□ 0.5
SOX30-203ENST00000519442 MINK1Q8N4C8 1332 aaPredicted RBP18.18■□□□□ 0.5
SOX30-203ENST00000519442 CCDC184Q52MB2 194 aa18.17■□□□□ 0.5
SOX30-203ENST00000519442 MYBBP1AQ9BQG0 1328 aaKnown RBP18.17■□□□□ 0.5
SOX30-203ENST00000519442 CC2D1BQ5T0F9 858 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms