RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 CHGAP10645 457 aaKnown RBP17.44■□□□□ 0.38
SPIDR-209ENST00000519141 SLC52A1Q9NWF4 448 aa17.44■□□□□ 0.38
SPIDR-209ENST00000519141 CARD11Q9BXL7 1154 aa17.43■□□□□ 0.38
SPIDR-209ENST00000519141 ZMYM3Q14202 1370 aa17.43■□□□□ 0.38
SPIDR-209ENST00000519141 KIAA1210Q9ULL0 1709 aa17.42■□□□□ 0.38
SPIDR-209ENST00000519141 FBXO31Q5XUX0 539 aaPredicted RBP17.42■□□□□ 0.38
SPIDR-209ENST00000519141 POLR1AO95602 1720 aaPredicted RBP17.41■□□□□ 0.38
SPIDR-209ENST00000519141 GPRASP1Q5JY77 1395 aa17.41■□□□□ 0.38
SPIDR-209ENST00000519141 MYO5BQ9ULV0 1848 aa17.41■□□□□ 0.38
SPIDR-209ENST00000519141 TMEM131LA2VDJ0 1609 aa17.4■□□□□ 0.38
SPIDR-209ENST00000519141 RPGRIP1LQ68CZ1 1315 aa17.4■□□□□ 0.38
SPIDR-209ENST00000519141 IDI1Q13907 227 aa17.39■□□□□ 0.37
SPIDR-209ENST00000519141 NRXN1Q9ULB1 1477 aa17.38■□□□□ 0.37
SPIDR-209ENST00000519141 NEXMIFQ5QGS0 1516 aa17.37■□□□□ 0.37
SPIDR-209ENST00000519141 NBPF1Q3BBV0 1214 aa17.36■□□□□ 0.37
SPIDR-209ENST00000519141 IQGAP1P46940 1657 aa17.35■□□□□ 0.37
SPIDR-209ENST00000519141 ADGRF5Q8IZF2 1346 aa17.34■□□□□ 0.37
SPIDR-209ENST00000519141 TNRQ92752 1358 aa17.33■□□□□ 0.36
SPIDR-209ENST00000519141 PIK3C2GO75747 1445 aa17.33■□□□□ 0.36
SPIDR-209ENST00000519141 DDX10Q13206 875 aaKnown RBP17.32■□□□□ 0.36
SPIDR-209ENST00000519141 WASHC2AQ641Q2 1341 aa17.32■□□□□ 0.36
SPIDR-209ENST00000519141 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
SPIDR-209ENST00000519141 CCDC7Q96M83 1385 aa17.31■□□□□ 0.36
SPIDR-209ENST00000519141 STRCQ7RTU9 1775 aa17.31■□□□□ 0.36
SPIDR-209ENST00000519141 SETBP1Q9Y6X0 1596 aa17.3■□□□□ 0.36
SPIDR-209ENST00000519141 ILDR1Q86SU0 546 aaPredicted RBP17.3■□□□□ 0.36
SPIDR-209ENST00000519141 KDM5AP29375 1690 aaKnown RBP17.3■□□□□ 0.36
SPIDR-209ENST00000519141 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
SPIDR-209ENST00000519141 A2ML1A8K2U0 1454 aa17.3■□□□□ 0.36
SPIDR-209ENST00000519141 VGFO15240 615 aaPredicted RBP17.29■□□□□ 0.36
SPIDR-209ENST00000519141 SCAF11Q99590 1463 aaKnown RBP17.29■□□□□ 0.36
SPIDR-209ENST00000519141 ST20-MTHFSA0A0A6YYL1 179 aa17.29■□□□□ 0.36
SPIDR-209ENST00000519141 KIF7Q2M1P5 1343 aa17.27■□□□□ 0.36
SPIDR-209ENST00000519141 CFAP70Q5T0N1 1121 aa17.27■□□□□ 0.36
SPIDR-209ENST00000519141 C11orf95C9JLR9 678 aaPredicted RBP17.26■□□□□ 0.35
SPIDR-209ENST00000519141 NLRP1Q9C000 1473 aa17.26■□□□□ 0.35
SPIDR-209ENST00000519141 EIF3AQ14152 1382 aaKnown RBP17.26■□□□□ 0.35
SPIDR-209ENST00000519141 MIER1Q8N108 512 aa17.26■□□□□ 0.35
SPIDR-209ENST00000519141 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
SPIDR-209ENST00000519141 UBR1Q8IWV7 1749 aa17.26■□□□□ 0.35
SPIDR-209ENST00000519141 MYO3AQ8NEV4 1616 aa17.25■□□□□ 0.35
SPIDR-209ENST00000519141 NUTM2DQ5VT03 806 aaPredicted RBP17.24■□□□□ 0.35
SPIDR-209ENST00000519141 C14orf93Q9H972 538 aaKnown RBP17.24■□□□□ 0.35
SPIDR-209ENST00000519141 RIMS2Q9UQ26 1411 aa17.24■□□□□ 0.35
SPIDR-209ENST00000519141 ADGRB1O14514 1584 aa17.24■□□□□ 0.35
SPIDR-209ENST00000519141 CEP170BQ9Y4F5 1589 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-209ENST00000519141 ZNF142P52746 1687 aaPredicted RBP17.23■□□□□ 0.35
SPIDR-209ENST00000519141 TESK2Q96S53 571 aa17.19■□□□□ 0.34
SPIDR-209ENST00000519141 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
SPIDR-209ENST00000519141 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.18■□□□□ 0.34
SPIDR-209ENST00000519141 FBXO41Q8TF61 875 aa17.17■□□□□ 0.34
SPIDR-209ENST00000519141 ALKQ9UM73 1620 aa17.17■□□□□ 0.34
SPIDR-209ENST00000519141 ASXL1Q8IXJ9 1541 aa17.17■□□□□ 0.34
SPIDR-209ENST00000519141 NCKAP5LQ9HCH0 1330 aa17.17■□□□□ 0.34
SPIDR-209ENST00000519141 TMF1P82094 1093 aa17.16■□□□□ 0.34
SPIDR-209ENST00000519141 DISP3Q9P2K9 1392 aa17.16■□□□□ 0.34
SPIDR-209ENST00000519141 TMEM2Q9UHN6 1383 aa17.16■□□□□ 0.34
SPIDR-209ENST00000519141 HDGFP51858 240 aaKnown RBP17.16■□□□□ 0.34
SPIDR-209ENST00000519141 CERKQ8TCT0 537 aa17.16■□□□□ 0.34
SPIDR-209ENST00000519141 ARHGEF28Q8N1W1 1705 aaKnown RBP17.15■□□□□ 0.34
SPIDR-209ENST00000519141 QRICH2Q9H0J4 1663 aa17.14■□□□□ 0.34
SPIDR-209ENST00000519141 SETD1AO15047 1707 aaKnown RBP17.14■□□□□ 0.33
SPIDR-209ENST00000519141 ANP32CO43423 234 aa17.14■□□□□ 0.33
SPIDR-209ENST00000519141 TMEM132EQ6IEE7 984 aa17.14■□□□□ 0.33
SPIDR-209ENST00000519141 NRXN3Q9Y4C0 1643 aa17.13■□□□□ 0.33
SPIDR-209ENST00000519141 SBNO2Q9Y2G9 1366 aa17.12■□□□□ 0.33
SPIDR-209ENST00000519141 SLIT1O75093 1534 aa17.12■□□□□ 0.33
SPIDR-209ENST00000519141 SLC24A1O60721 1099 aa17.12■□□□□ 0.33
SPIDR-209ENST00000519141 SENP3Q9H4L4 574 aaPredicted RBP17.12■□□□□ 0.33
SPIDR-209ENST00000519141 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
SPIDR-209ENST00000519141 CENPJQ9HC77 1338 aaPredicted RBP17.12■□□□□ 0.33
SPIDR-209ENST00000519141 CDCA8Q53HL2 280 aa17.1■□□□□ 0.33
SPIDR-209ENST00000519141 THEMISQ8N1K5 641 aaPredicted RBP17.1■□□□□ 0.33
SPIDR-209ENST00000519141 ARHGAP23Q9P227 1491 aa17.1■□□□□ 0.33
SPIDR-209ENST00000519141 YTHDC2Q9H6S0 1430 aaKnown RBP17.09■□□□□ 0.33
SPIDR-209ENST00000519141 LTBP4Q8N2S1 1624 aa17.08■□□□□ 0.32
SPIDR-209ENST00000519141 PLEKHG1Q9ULL1 1385 aa17.07■□□□□ 0.32
SPIDR-209ENST00000519141 EID1Q9Y6B2 187 aa17.07■□□□□ 0.32
SPIDR-209ENST00000519141 ANKLE2Q86XL3 938 aa17.06■□□□□ 0.32
SPIDR-209ENST00000519141 ZNF335Q9H4Z2 1342 aaPredicted RBP17.05■□□□□ 0.32
SPIDR-209ENST00000519141 STK26Q9P289 416 aa17.05■□□□□ 0.32
SPIDR-209ENST00000519141 DLC1Q96QB1 1528 aa17.05■□□□□ 0.32
SPIDR-209ENST00000519141 MYOM1P52179 1685 aa17.05■□□□□ 0.32
SPIDR-209ENST00000519141 TXNDC2Q86VQ3 553 aa17.04■□□□□ 0.32
SPIDR-209ENST00000519141 BCANQ96GW7 911 aa17.04■□□□□ 0.32
SPIDR-209ENST00000519141 KNDC1Q76NI1 1749 aa17.04■□□□□ 0.32
SPIDR-209ENST00000519141 LRPPRCP42704 1394 aaKnown RBP17.04■□□□□ 0.32
SPIDR-209ENST00000519141 CCER2I3L3R5 266 aa17.03■□□□□ 0.32
SPIDR-209ENST00000519141 LTKP29376 864 aa17.03■□□□□ 0.32
SPIDR-209ENST00000519141 ADAMTS13Q76LX8 1427 aa17.02■□□□□ 0.32
SPIDR-209ENST00000519141 MED14O60244 1454 aa17.01■□□□□ 0.31
SPIDR-209ENST00000519141 DIP2AQ14689 1571 aa17.01■□□□□ 0.31
SPIDR-209ENST00000519141 METP08581 1390 aa17■□□□□ 0.31
SPIDR-209ENST00000519141 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
SPIDR-209ENST00000519141 ABCC11Q96J66 1382 aa17■□□□□ 0.31
SPIDR-209ENST00000519141 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
SPIDR-209ENST00000519141 POGKQ9P215 609 aa16.99■□□□□ 0.31
SPIDR-209ENST00000519141 CPS1P31327 1500 aa16.99■□□□□ 0.31
SPIDR-209ENST00000519141 PRAM1Q96QH2 718 aa16.98■□□□□ 0.31
SPIDR-209ENST00000519141 TECPR2O15040 1411 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms