RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-209ENST00000519100 IRX2Q9BZI1 471 aaPredicted RBP7.74□□□□□ -1.17
PABPC1-209ENST00000519100 RCCD1A6NED2 376 aa7.73□□□□□ -1.17
PABPC1-209ENST00000519100 PPP4CP60510 307 aa7.73□□□□□ -1.17
PABPC1-209ENST00000519100 SAMD7Q7Z3H4 446 aa7.73□□□□□ -1.17
PABPC1-209ENST00000519100 SWT1Q5T5J6 900 aaKnown RBP7.72□□□□□ -1.17
PABPC1-209ENST00000519100 IRF6O14896 467 aa7.71□□□□□ -1.18
PABPC1-209ENST00000519100 RBM46Q8TBY0 533 aaKnown RBP7.71□□□□□ -1.18
PABPC1-209ENST00000519100 TMEM134Q9H6X4 195 aa7.71□□□□□ -1.18
PABPC1-209ENST00000519100 DNAJB2P25686 324 aa7.7□□□□□ -1.18
PABPC1-209ENST00000519100 MINK1Q8N4C8 1332 aaPredicted RBP7.69□□□□□ -1.18
PABPC1-209ENST00000519100 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.67□□□□□ -1.18
PABPC1-209ENST00000519100 OATP04181 439 aa7.67□□□□□ -1.18
PABPC1-209ENST00000519100 HDGFP51858 240 aaKnown RBP7.67□□□□□ -1.18
PABPC1-209ENST00000519100 TJAP1Q5JTD0 557 aa7.67□□□□□ -1.18
PABPC1-209ENST00000519100 REPIN1Q9BWE0 567 aaKnown RBP7.67□□□□□ -1.18
PABPC1-209ENST00000519100 SLC10A3P09131 477 aa7.66□□□□□ -1.18
PABPC1-209ENST00000519100 TMUB1Q9BVT8 246 aa7.66□□□□□ -1.18
PABPC1-209ENST00000519100 SLC24A3Q9HC58 644 aa7.66□□□□□ -1.18
PABPC1-209ENST00000519100 RNF40O75150 1001 aa7.65□□□□□ -1.18
PABPC1-209ENST00000519100 MTRQ99707 1265 aa7.64□□□□□ -1.19
PABPC1-209ENST00000519100 APLP1P51693 650 aa7.63□□□□□ -1.19
PABPC1-209ENST00000519100 MDM2Q00987 491 aaPredicted RBP7.63□□□□□ -1.19
PABPC1-209ENST00000519100 IL21Q9HBE4 155 aa7.63□□□□□ -1.19
PABPC1-209ENST00000519100 TRIM66O15016 1216 aa7.62□□□□□ -1.19
PABPC1-209ENST00000519100 KRI1Q8N9T8 703 aaKnown RBP7.62□□□□□ -1.19
PABPC1-209ENST00000519100 AMHR2Q16671 573 aa7.61□□□□□ -1.19
PABPC1-209ENST00000519100 SLF2Q8IX21 1173 aa7.61□□□□□ -1.19
PABPC1-209ENST00000519100 DAXXQ9UER7 740 aaPredicted RBP7.61□□□□□ -1.19
PABPC1-209ENST00000519100 ZNF516Q92618 1163 aa7.6□□□□□ -1.19
PABPC1-209ENST00000519100 TPRNQ4KMQ1 711 aa7.59□□□□□ -1.19
PABPC1-209ENST00000519100 PARP9Q8IXQ6 854 aa7.59□□□□□ -1.19
PABPC1-209ENST00000519100 NECTIN2Q92692 538 aa7.59□□□□□ -1.19
PABPC1-209ENST00000519100 AK7Q96M32 723 aa7.59□□□□□ -1.19
PABPC1-209ENST00000519100 CFHP08603 1231 aa7.58□□□□□ -1.2
PABPC1-209ENST00000519100 PRKCSHP14314 528 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-209ENST00000519100 PPP1R18Q6NYC8 613 aa7.58□□□□□ -1.2
PABPC1-209ENST00000519100 Q6ZNB5 142 aa7.58□□□□□ -1.2
PABPC1-209ENST00000519100 DDX11L8A8MPP1 907 aa7.57□□□□□ -1.2
PABPC1-209ENST00000519100 CD46P15529 392 aa7.57□□□□□ -1.2
PABPC1-209ENST00000519100 PRKD2Q9BZL6 878 aa7.57□□□□□ -1.2
PABPC1-209ENST00000519100 GPCPD1Q9NPB8 672 aa7.57□□□□□ -1.2
PABPC1-209ENST00000519100 FAM217BQ9NTX9 383 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-209ENST00000519100 SLC4A3P48751 1232 aa7.56□□□□□ -1.2
PABPC1-209ENST00000519100 NKX2-3Q8TAU0 364 aa7.56□□□□□ -1.2
PABPC1-209ENST00000519100 MS4A1P11836 297 aa7.55□□□□□ -1.2
PABPC1-209ENST00000519100 COPS2P61201 443 aa7.55□□□□□ -1.2
PABPC1-209ENST00000519100 PDE4DQ08499 809 aa7.55□□□□□ -1.2
PABPC1-209ENST00000519100 LAPTM4AQ15012 233 aa7.55□□□□□ -1.2
PABPC1-209ENST00000519100 GIGYF2Q6Y7W6 1299 aaKnown RBP7.55□□□□□ -1.2
PABPC1-209ENST00000519100 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.55□□□□□ -1.2
PABPC1-209ENST00000519100 ACTN4O43707 911 aaKnown RBP7.54□□□□□ -1.2
PABPC1-209ENST00000519100 GFRA3O60609 400 aa7.54□□□□□ -1.2
PABPC1-209ENST00000519100 CLCN1P35523 988 aa7.54□□□□□ -1.2
PABPC1-209ENST00000519100 GCGRP47871 477 aa7.53□□□□□ -1.2
PABPC1-209ENST00000519100 RDH13Q8NBN7 331 aa7.53□□□□□ -1.2
PABPC1-209ENST00000519100 TTLL12Q14166 644 aaPredicted RBP7.52□□□□□ -1.21
PABPC1-209ENST00000519100 BLOC1S3Q6QNY0 202 aa7.52□□□□□ -1.21
PABPC1-209ENST00000519100 GPBP1L1Q9HC44 474 aaPredicted RBP7.52□□□□□ -1.21
PABPC1-209ENST00000519100 V9GY48 417 aaPredicted RBP7.52□□□□□ -1.21
PABPC1-209ENST00000519100 ZPR1O75312 459 aa7.51□□□□□ -1.21
PABPC1-209ENST00000519100 FUT2Q10981 343 aa7.51□□□□□ -1.21
PABPC1-209ENST00000519100 PUS10Q3MIT2 529 aaKnown RBP7.51□□□□□ -1.21
PABPC1-209ENST00000519100 HLA-CQ95604 372 aa7.51□□□□□ -1.21
PABPC1-209ENST00000519100 PRR14Q9BWN1 585 aa7.51□□□□□ -1.21
PABPC1-209ENST00000519100 PCDHB3Q9Y5E6 796 aa7.51□□□□□ -1.21
PABPC1-209ENST00000519100 SSTR3P32745 418 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-209ENST00000519100 GGCXP38435 758 aa7.5□□□□□ -1.21
PABPC1-209ENST00000519100 SULF1Q8IWU6 871 aa7.5□□□□□ -1.21
PABPC1-209ENST00000519100 TLL1O43897 1013 aa7.49□□□□□ -1.21
PABPC1-209ENST00000519100 KMT5BQ4FZB7 885 aa7.49□□□□□ -1.21
PABPC1-209ENST00000519100 LCE2BO14633 110 aa7.48□□□□□ -1.21
PABPC1-209ENST00000519100 MORN1Q5T089 497 aa7.48□□□□□ -1.21
PABPC1-209ENST00000519100 NRG2O14511 850 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-209ENST00000519100 GUCA2AQ02747 115 aa7.47□□□□□ -1.21
PABPC1-209ENST00000519100 TRAF7Q6Q0C0 670 aa7.47□□□□□ -1.21
PABPC1-209ENST00000519100 HOXA2O43364 376 aa7.45□□□□□ -1.22
PABPC1-209ENST00000519100 KDM4AO75164 1064 aa7.45□□□□□ -1.22
PABPC1-209ENST00000519100 BRPF1P55201 1214 aaPredicted RBP7.45□□□□□ -1.22
PABPC1-209ENST00000519100 SPIRE2Q8WWL2 714 aa7.45□□□□□ -1.22
PABPC1-209ENST00000519100 BEGAINQ9BUH8 593 aa7.45□□□□□ -1.22
PABPC1-209ENST00000519100 KDM4CQ9H3R0 1056 aa7.45□□□□□ -1.22
PABPC1-209ENST00000519100 SLC27A5Q9Y2P5 690 aa7.45□□□□□ -1.22
PABPC1-209ENST00000519100 RNF223E7ERA6 249 aa7.44□□□□□ -1.22
PABPC1-209ENST00000519100 THAP11Q96EK4 314 aa7.44□□□□□ -1.22
PABPC1-209ENST00000519100 PDZRN3Q9UPQ7 1066 aa7.44□□□□□ -1.22
PABPC1-209ENST00000519100 PLEKHG3A1L390 1219 aa7.43□□□□□ -1.22
PABPC1-209ENST00000519100 ATP6V1AP38606 617 aa7.43□□□□□ -1.22
PABPC1-209ENST00000519100 RNF19BQ6ZMZ0 732 aa7.43□□□□□ -1.22
PABPC1-209ENST00000519100 SCUBE3Q8IX30 993 aa7.43□□□□□ -1.22
PABPC1-209ENST00000519100 PCDHGC3Q9UN70 934 aa7.43□□□□□ -1.22
PABPC1-209ENST00000519100 MOXD2PA6NHM9 499 aa7.42□□□□□ -1.22
PABPC1-209ENST00000519100 NDUFV2P19404 249 aa7.42□□□□□ -1.22
PABPC1-209ENST00000519100 RSPH4AQ5TD94 716 aa7.42□□□□□ -1.22
PABPC1-209ENST00000519100 TBC1D2Q9BYX2 928 aa7.42□□□□□ -1.22
PABPC1-209ENST00000519100 FAM117AQ9C073 453 aa7.42□□□□□ -1.22
PABPC1-209ENST00000519100 SLC19A1P41440 591 aa7.41□□□□□ -1.22
PABPC1-209ENST00000519100 PPEF1O14829 653 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-209ENST00000519100 EMID1Q96A84 441 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-209ENST00000519100 PRDM9Q9NQV7 894 aa7.4□□□□□ -1.22
PABPC1-209ENST00000519100 NR1I2O75469 434 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms