RNA–Protein interactions for RNA: ENST00000518858.1

CLVS1-204, Transcript of clavesin 1, humanhuman

TSL 2

Gene CLVS1, Length 2,980 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-204ENST00000518858 MAP3K1Q13233 1512 aa10.82□□□□□ -0.68
CLVS1-204ENST00000518858 SYCP2Q9BX26 1530 aa10.82□□□□□ -0.68
CLVS1-204ENST00000518858 ATP10AO60312 1499 aa10.82□□□□□ -0.68
CLVS1-204ENST00000518858 ARXQ96QS3 562 aa10.82□□□□□ -0.68
CLVS1-204ENST00000518858 HSPA5P11021 654 aaKnown RBP10.81□□□□□ -0.68
CLVS1-204ENST00000518858 MLH3Q9UHC1 1453 aa10.81□□□□□ -0.68
CLVS1-204ENST00000518858 HNRNPMP52272 730 aaKnown RBP eCLIP10.81□□□□□ -0.68
CLVS1-204ENST00000518858 EXOC6Q8TAG9 804 aa10.81□□□□□ -0.68
CLVS1-204ENST00000518858 NUDCQ9Y266 331 aa10.81□□□□□ -0.68
CLVS1-204ENST00000518858 ZNF692Q9BU19 519 aaPredicted RBP10.8□□□□□ -0.68
CLVS1-204ENST00000518858 PLEKHH2Q8IVE3 1493 aa10.8□□□□□ -0.68
CLVS1-204ENST00000518858 C9orf84Q5VXU9 1444 aa10.8□□□□□ -0.68
CLVS1-204ENST00000518858 KIAA1107Q9UPP5 1409 aa10.8□□□□□ -0.68
CLVS1-204ENST00000518858 TCERG1O14776 1098 aaKnown RBP10.8□□□□□ -0.68
CLVS1-204ENST00000518858 TMEM132AQ24JP5 1023 aa10.8□□□□□ -0.68
CLVS1-204ENST00000518858 DIP2CQ9Y2E4 1556 aa10.8□□□□□ -0.68
CLVS1-204ENST00000518858 KIDINS220Q9ULH0 1771 aa10.8□□□□□ -0.68
CLVS1-204ENST00000518858 ABCA6Q8N139 1617 aa10.79□□□□□ -0.68
CLVS1-204ENST00000518858 MADDQ8WXG6 1647 aa10.79□□□□□ -0.68
CLVS1-204ENST00000518858 ZNF644Q9H582 1327 aaPredicted RBP10.79□□□□□ -0.68
CLVS1-204ENST00000518858 SMG6Q86US8 1419 aaKnown RBP10.79□□□□□ -0.68
CLVS1-204ENST00000518858 RNF123Q5XPI4 1314 aa10.78□□□□□ -0.68
CLVS1-204ENST00000518858 PTPRMP28827 1452 aa10.77□□□□□ -0.68
CLVS1-204ENST00000518858 HSP90AA1P07900 732 aaKnown RBP10.77□□□□□ -0.69
CLVS1-204ENST00000518858 MLECQ14165 292 aa10.77□□□□□ -0.69
CLVS1-204ENST00000518858 REREQ9P2R6 1566 aa10.77□□□□□ -0.69
CLVS1-204ENST00000518858 RIMS1Q86UR5 1692 aaKnown RBP10.77□□□□□ -0.69
CLVS1-204ENST00000518858 SPAG9O60271 1321 aaKnown RBP10.76□□□□□ -0.69
CLVS1-204ENST00000518858 MBD5Q9P267 1494 aa10.76□□□□□ -0.69
CLVS1-204ENST00000518858 HS6ST3Q8IZP7 471 aa10.76□□□□□ -0.69
CLVS1-204ENST00000518858 DDRGK1Q96HY6 314 aa10.76□□□□□ -0.69
CLVS1-204ENST00000518858 POGKQ9P215 609 aa10.76□□□□□ -0.69
CLVS1-204ENST00000518858 CNTLNQ9NXG0 1405 aa10.76□□□□□ -0.69
CLVS1-204ENST00000518858 RBM10P98175 930 aaKnown RBP10.75□□□□□ -0.69
CLVS1-204ENST00000518858 CAMSAP2Q08AD1 1489 aa10.75□□□□□ -0.69
CLVS1-204ENST00000518858 FER1L4A9Z1Z3 1794 aa10.75□□□□□ -0.69
CLVS1-204ENST00000518858 ATP7AQ04656 1500 aa10.75□□□□□ -0.69
CLVS1-204ENST00000518858 INO80Q9ULG1 1556 aaPredicted RBP10.75□□□□□ -0.69
CLVS1-204ENST00000518858 RRP9O43818 475 aaKnown RBP10.74□□□□□ -0.69
CLVS1-204ENST00000518858 AGLP35573 1532 aa10.73□□□□□ -0.69
CLVS1-204ENST00000518858 PNNQ9H307 717 aaKnown RBP10.73□□□□□ -0.69
CLVS1-204ENST00000518858 MYOM3Q5VTT5 1437 aa10.72□□□□□ -0.69
CLVS1-204ENST00000518858 STAG3Q9UJ98 1225 aa10.72□□□□□ -0.69
CLVS1-204ENST00000518858 C14orf37Q86TY3 774 aa10.71□□□□□ -0.69
CLVS1-204ENST00000518858 CCDC141Q6ZP82 1450 aa10.71□□□□□ -0.69
CLVS1-204ENST00000518858 GTPBP6O43824 516 aaPredicted RBP10.71□□□□□ -0.69
CLVS1-204ENST00000518858 ADGBQ8N7X0 1667 aa10.71□□□□□ -0.7
CLVS1-204ENST00000518858 ARHGEF5Q12774 1597 aa10.71□□□□□ -0.7
CLVS1-204ENST00000518858 MIA2Q96PC5 1412 aa10.71□□□□□ -0.7
CLVS1-204ENST00000518858 MS4A1P11836 297 aa10.71□□□□□ -0.7
CLVS1-204ENST00000518858 RSPH4AQ5TD94 716 aa10.71□□□□□ -0.7
CLVS1-204ENST00000518858 RTEL1-TNFRSF6BF6WH68 1400 aa10.7□□□□□ -0.7
CLVS1-204ENST00000518858 EIF4G2P78344 907 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLVS1-204ENST00000518858 PLXNC1O60486 1568 aa10.7□□□□□ -0.7
CLVS1-204ENST00000518858 A2MP01023 1474 aa10.7□□□□□ -0.7
CLVS1-204ENST00000518858 RRP1P56182 461 aaKnown RBP10.69□□□□□ -0.7
CLVS1-204ENST00000518858 AAMPQ13685 434 aa10.68□□□□□ -0.7
CLVS1-204ENST00000518858 PLIN1O60240 522 aa10.68□□□□□ -0.7
CLVS1-204ENST00000518858 TSPY4P0CV99 314 aa10.67□□□□□ -0.7
CLVS1-204ENST00000518858 TSPY10P0CW01 314 aa10.67□□□□□ -0.7
CLVS1-204ENST00000518858 POLR3GLQ9BT43 218 aa10.67□□□□□ -0.7
CLVS1-204ENST00000518858 CCDC7Q96M83 1385 aa10.67□□□□□ -0.7
CLVS1-204ENST00000518858 RGS3P49796 1198 aa10.67□□□□□ -0.7
CLVS1-204ENST00000518858 PANK2Q9BZ23 570 aa10.67□□□□□ -0.7
CLVS1-204ENST00000518858 PTPN23Q9H3S7 1636 aa10.67□□□□□ -0.7
CLVS1-204ENST00000518858 CEBPAP49715 358 aaPredicted RBP10.66□□□□□ -0.7
CLVS1-204ENST00000518858 ESF1Q9H501 851 aaKnown RBP10.66□□□□□ -0.7
CLVS1-204ENST00000518858 FGD6Q6ZV73 1430 aa10.65□□□□□ -0.7
CLVS1-204ENST00000518858 C3P01024 1663 aa10.65□□□□□ -0.7
CLVS1-204ENST00000518858 MAST1Q9Y2H9 1570 aa10.65□□□□□ -0.7
CLVS1-204ENST00000518858 DHX29Q7Z478 1369 aaKnown RBP10.65□□□□□ -0.7
CLVS1-204ENST00000518858 LMTK3Q96Q04 1460 aa10.64□□□□□ -0.71
CLVS1-204ENST00000518858 FGD1P98174 961 aa10.64□□□□□ -0.71
CLVS1-204ENST00000518858 CLCN1P35523 988 aa10.64□□□□□ -0.71
CLVS1-204ENST00000518858 GGT6Q6P531 493 aa10.64□□□□□ -0.71
CLVS1-204ENST00000518858 RCAN3Q9UKA8 241 aa10.63□□□□□ -0.71
CLVS1-204ENST00000518858 SSUH2Q9Y2M2 353 aa10.63□□□□□ -0.71
CLVS1-204ENST00000518858 TCOF1Q13428 1488 aaKnown RBP10.63□□□□□ -0.71
CLVS1-204ENST00000518858 XRCC6P12956 609 aaKnown RBP eCLIP10.63□□□□□ -0.71
CLVS1-204ENST00000518858 MROH2AA6NES4 1674 aa10.63□□□□□ -0.71
CLVS1-204ENST00000518858 CROCC2H7BZ55 1655 aa10.63□□□□□ -0.71
CLVS1-204ENST00000518858 CLTCQ00610 1675 aaKnown RBP10.63□□□□□ -0.71
CLVS1-204ENST00000518858 SETD1BQ9UPS6 1966 aaKnown RBP10.62□□□□□ -0.71
CLVS1-204ENST00000518858 SLKQ9H2G2 1235 aaPredicted RBP10.62□□□□□ -0.71
CLVS1-204ENST00000518858 PRDM4Q9UKN5 801 aa10.62□□□□□ -0.71
CLVS1-204ENST00000518858 KIF7Q2M1P5 1343 aa10.62□□□□□ -0.71
CLVS1-204ENST00000518858 PREX1Q8TCU6 1659 aa10.62□□□□□ -0.71
CLVS1-204ENST00000518858 ABCC5O15440 1437 aa10.62□□□□□ -0.71
CLVS1-204ENST00000518858 GZF1Q9H116 711 aaPredicted RBP10.62□□□□□ -0.71
CLVS1-204ENST00000518858 DNMT1P26358 1616 aaKnown RBP10.61□□□□□ -0.71
CLVS1-204ENST00000518858 KIF3BO15066 747 aa10.61□□□□□ -0.71
CLVS1-204ENST00000518858 HOMEZQ8IX15 550 aa10.61□□□□□ -0.71
CLVS1-204ENST00000518858 NCOA1Q15788 1441 aa10.61□□□□□ -0.71
CLVS1-204ENST00000518858 STK25O00506 426 aa10.6□□□□□ -0.71
CLVS1-204ENST00000518858 L1TD1Q5T7N2 865 aaKnown RBP10.6□□□□□ -0.71
CLVS1-204ENST00000518858 ZMYM3Q14202 1370 aa10.6□□□□□ -0.71
CLVS1-204ENST00000518858 DAPK1P53355 1430 aa10.6□□□□□ -0.71
CLVS1-204ENST00000518858 SHANK2Q9UPX8 1470 aa10.6□□□□□ -0.71
CLVS1-204ENST00000518858 CRBNQ96SW2 442 aa10.6□□□□□ -0.71
CLVS1-204ENST00000518858 C8orf34Q49A92 452 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms