RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 TMEM2Q9UHN6 1383 aa15.42■□□□□ 0.06
BRD9-216ENST00000518251 RGS17Q9UGC6 210 aaPredicted RBP15.41■□□□□ 0.06
BRD9-216ENST00000518251 ADGRB3O60242 1522 aa15.41■□□□□ 0.06
BRD9-216ENST00000518251 TET3O43151 1660 aa15.39■□□□□ 0.05
BRD9-216ENST00000518251 ROBO1Q9Y6N7 1651 aa15.39■□□□□ 0.05
BRD9-216ENST00000518251 FAM135BQ49AJ0 1406 aa15.39■□□□□ 0.05
BRD9-216ENST00000518251 NKTRP30414 1462 aaKnown RBP15.39■□□□□ 0.05
BRD9-216ENST00000518251 TXNDC2Q86VQ3 553 aa15.38■□□□□ 0.05
BRD9-216ENST00000518251 TMEM94Q12767 1356 aa15.37■□□□□ 0.05
BRD9-216ENST00000518251 IQGAP3Q86VI3 1631 aa15.37■□□□□ 0.05
BRD9-216ENST00000518251 NOS1P29475 1434 aa15.35■□□□□ 0.05
BRD9-216ENST00000518251 MPHOSPH9Q99550 1183 aa15.35■□□□□ 0.05
BRD9-216ENST00000518251 NUP155O75694 1391 aa15.35■□□□□ 0.05
BRD9-216ENST00000518251 EID1Q9Y6B2 187 aa15.34■□□□□ 0.05
BRD9-216ENST00000518251 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
BRD9-216ENST00000518251 KANK1Q14678 1352 aa15.32■□□□□ 0.04
BRD9-216ENST00000518251 ZFYVE9O95405 1425 aa15.31■□□□□ 0.04
BRD9-216ENST00000518251 SETD1AO15047 1707 aaKnown RBP15.31■□□□□ 0.04
BRD9-216ENST00000518251 COL16A1Q07092 1604 aaPredicted RBP15.29■□□□□ 0.04
BRD9-216ENST00000518251 RPRD2Q5VT52 1461 aaKnown RBP15.29■□□□□ 0.04
BRD9-216ENST00000518251 IDI1Q13907 227 aa15.29■□□□□ 0.04
BRD9-216ENST00000518251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.04
BRD9-216ENST00000518251 CFAP65Q6ZU64 1925 aaKnown RBP15.29■□□□□ 0.04
BRD9-216ENST00000518251 KCNA6P17658 529 aa15.28■□□□□ 0.04
BRD9-216ENST00000518251 POTEAQ6S8J7 498 aa15.28■□□□□ 0.04
BRD9-216ENST00000518251 PHLPP1O60346 1717 aa15.27■□□□□ 0.04
BRD9-216ENST00000518251 RBM33Q96EV2 1170 aaKnown RBP15.27■□□□□ 0.04
BRD9-216ENST00000518251 SLC26A8Q96RN1 970 aa15.27■□□□□ 0.04
BRD9-216ENST00000518251 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
BRD9-216ENST00000518251 MSH6P52701 1360 aa15.25■□□□□ 0.03
BRD9-216ENST00000518251 ANKRD30BQ9BXX2 1392 aa15.25■□□□□ 0.03
BRD9-216ENST00000518251 SIN3AQ96ST3 1273 aa15.25■□□□□ 0.03
BRD9-216ENST00000518251 TMEM131LA2VDJ0 1609 aa15.25■□□□□ 0.03
BRD9-216ENST00000518251 LRP6O75581 1613 aa15.25■□□□□ 0.03
BRD9-216ENST00000518251 PLEKHG1Q9ULL1 1385 aa15.24■□□□□ 0.03
BRD9-216ENST00000518251 FOXD1Q16676 465 aa15.24■□□□□ 0.03
BRD9-216ENST00000518251 E9PCH4 1651 aa15.22■□□□□ 0.03
BRD9-216ENST00000518251 NEUROD1Q13562 356 aa15.22■□□□□ 0.03
BRD9-216ENST00000518251 PROSER2Q86WR7 435 aaPredicted RBP15.22■□□□□ 0.03
BRD9-216ENST00000518251 RIMS2Q9UQ26 1411 aa15.22■□□□□ 0.03
BRD9-216ENST00000518251 DIP2AQ14689 1571 aa15.22■□□□□ 0.03
BRD9-216ENST00000518251 JCADQ9P266 1359 aa15.22■□□□□ 0.03
BRD9-216ENST00000518251 AHDC1Q5TGY3 1603 aaPredicted RBP15.21■□□□□ 0.03
BRD9-216ENST00000518251 TIMELESSQ9UNS1 1208 aa15.21■□□□□ 0.03
BRD9-216ENST00000518251 MYO5BQ9ULV0 1848 aa15.21■□□□□ 0.03
BRD9-216ENST00000518251 TONSLQ96HA7 1378 aa15.21■□□□□ 0.02
BRD9-216ENST00000518251 CHD2O14647 1828 aaKnown RBP15.2■□□□□ 0.02
BRD9-216ENST00000518251 SLC52A1Q9NWF4 448 aa15.2■□□□□ 0.02
BRD9-216ENST00000518251 ADAMTS13Q76LX8 1427 aa15.19■□□□□ 0.02
BRD9-216ENST00000518251 SPHKAPQ2M3C7 1700 aa15.18■□□□□ 0.02
BRD9-216ENST00000518251 SHPRHQ149N8 1683 aa15.18■□□□□ 0.02
BRD9-216ENST00000518251 NCOA3Q9Y6Q9 1424 aa15.17■□□□□ 0.02
BRD9-216ENST00000518251 SLAIN2Q9P270 581 aa15.17■□□□□ 0.02
BRD9-216ENST00000518251 TRPM2O94759 1503 aa15.16■□□□□ 0.02
BRD9-216ENST00000518251 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.15■□□□□ 0.02
BRD9-216ENST00000518251 CCDC144AA2RUR9 1427 aa15.14■□□□□ 0.01
BRD9-216ENST00000518251 XRN1Q8IZH2 1706 aaKnown RBP15.14■□□□□ 0.01
BRD9-216ENST00000518251 PPP1R15AO75807 674 aaPredicted RBP15.13■□□□□ 0.01
BRD9-216ENST00000518251 NRXN3Q9Y4C0 1643 aa15.13■□□□□ 0.01
BRD9-216ENST00000518251 SPATA31A6Q5VVP1 1343 aa15.13■□□□□ 0.01
BRD9-216ENST00000518251 BCANQ96GW7 911 aa15.12■□□□□ 0.01
BRD9-216ENST00000518251 ASXL1Q8IXJ9 1541 aa15.12■□□□□ 0.01
BRD9-216ENST00000518251 PIK3R4Q99570 1358 aa15.11■□□□□ 0.01
BRD9-216ENST00000518251 DCCP43146 1447 aa15.11■□□□□ 0.01
BRD9-216ENST00000518251 PTPRUQ92729 1446 aa15.11■□□□□ 0.01
BRD9-216ENST00000518251 TBX22Q9Y458 520 aa15.1■□□□□ 0.01
BRD9-216ENST00000518251 SETBP1Q9Y6X0 1596 aa15.1■□□□□ 0.01
BRD9-216ENST00000518251 CLTCL1P53675 1640 aa15.1■□□□□ 0.01
BRD9-216ENST00000518251 NHSL1Q5SYE7 1610 aa15.09■□□□□ 0.01
BRD9-216ENST00000518251 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0
BRD9-216ENST00000518251 CADPS2Q86UW7 1296 aa15.07■□□□□ 0
BRD9-216ENST00000518251 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.06■□□□□ 0
BRD9-216ENST00000518251 MST1RQ04912 1400 aa15.06■□□□□ 0
BRD9-216ENST00000518251 NUTM2DQ5VT03 806 aaPredicted RBP15.05■□□□□ -0
BRD9-216ENST00000518251 BRINP3Q76B58 766 aa15.05■□□□□ -0
BRD9-216ENST00000518251 C14orf37Q86TY3 774 aa15.05■□□□□ -0
BRD9-216ENST00000518251 L3MBTL2Q969R5 705 aa15.05■□□□□ -0
BRD9-216ENST00000518251 HDGFP51858 240 aaKnown RBP15.04■□□□□ -0
BRD9-216ENST00000518251 MEX3CQ5U5Q3 659 aaKnown RBP15.04■□□□□ -0
BRD9-216ENST00000518251 ZNF772Q68DY9 489 aaPredicted RBP15.04■□□□□ -0
BRD9-216ENST00000518251 UPF1Q92900 1129 aaKnown RBP eCLIP15.04■□□□□ -0
BRD9-216ENST00000518251 C19orf44Q9H6X5 657 aa15.04■□□□□ -0
BRD9-216ENST00000518251 KIF1BO60333 1816 aa15.03■□□□□ -0
BRD9-216ENST00000518251 NALCNQ8IZF0 1738 aa15.03■□□□□ -0
BRD9-216ENST00000518251 RGS12O14924 1447 aa15.02■□□□□ -0
BRD9-216ENST00000518251 CHGAP10645 457 aaKnown RBP15.02■□□□□ -0
BRD9-216ENST00000518251 ATF3P18847 181 aa15.02■□□□□ -0
BRD9-216ENST00000518251 SPATA31E1Q6ZUB1 1445 aa15.01□□□□□ -0.01
BRD9-216ENST00000518251 ADGRL3Q9HAR2 1447 aa15.01□□□□□ -0.01
BRD9-216ENST00000518251 NEXMIFQ5QGS0 1516 aa15.01□□□□□ -0.01
BRD9-216ENST00000518251 AMOTL2Q9Y2J4 779 aa15□□□□□ -0.01
BRD9-216ENST00000518251 LAMC1P11047 1609 aa14.99□□□□□ -0.01
BRD9-216ENST00000518251 METP08581 1390 aa14.98□□□□□ -0.01
BRD9-216ENST00000518251 PNPLA6Q8IY17 1366 aa14.98□□□□□ -0.01
BRD9-216ENST00000518251 AFF2P51816 1311 aa14.97□□□□□ -0.01
BRD9-216ENST00000518251 RXRBP28702 533 aa14.96□□□□□ -0.01
BRD9-216ENST00000518251 IFT172Q9UG01 1749 aa14.96□□□□□ -0.01
BRD9-216ENST00000518251 PTCH1Q13635 1447 aa14.95□□□□□ -0.02
BRD9-216ENST00000518251 NUTM2BA6NNL0 878 aaPredicted RBP14.95□□□□□ -0.02
BRD9-216ENST00000518251 NUTM2EB1AL46 878 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms