RNA–Protein interactions for RNA: ENST00000518209.1

CDH12-204, Transcript of cadherin 12, humanhuman

TSL 3

Gene CDH12, Length 666 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-204ENST00000518209 NKX2-3Q8TAU0 364 aa8.73□□□□□ -1.01
CDH12-204ENST00000518209 FAM187AA6NFU0 413 aa8.72□□□□□ -1.01
CDH12-204ENST00000518209 PRSS12P56730 875 aa8.72□□□□□ -1.01
CDH12-204ENST00000518209 TESPA1A2RU30 521 aaPredicted RBP8.71□□□□□ -1.02
CDH12-204ENST00000518209 CDCA7LQ96GN5 454 aa8.71□□□□□ -1.02
CDH12-204ENST00000518209 ZNF598Q86UK7 904 aaKnown RBP8.7□□□□□ -1.02
CDH12-204ENST00000518209 CDHR5Q9HBB8 845 aa8.7□□□□□ -1.02
CDH12-204ENST00000518209 NPDC1Q9NQX5 325 aaPredicted RBP8.69□□□□□ -1.02
CDH12-204ENST00000518209 RBM27Q9P2N5 1060 aaKnown RBP8.69□□□□□ -1.02
CDH12-204ENST00000518209 TSKSQ9UJT2 592 aa8.69□□□□□ -1.02
CDH12-204ENST00000518209 SPRYD7Q5W111 196 aa8.68□□□□□ -1.02
CDH12-204ENST00000518209 NECTIN2Q92692 538 aa8.68□□□□□ -1.02
CDH12-204ENST00000518209 AAASQ9NRG9 546 aa8.68□□□□□ -1.02
CDH12-204ENST00000518209 NUTM2FA1L443 756 aa8.67□□□□□ -1.02
CDH12-204ENST00000518209 ST8SIA5O15466 376 aa8.66□□□□□ -1.02
CDH12-204ENST00000518209 APLP1P51693 650 aa8.66□□□□□ -1.02
CDH12-204ENST00000518209 HDGFP51858 240 aaKnown RBP8.66□□□□□ -1.02
CDH12-204ENST00000518209 PTGDRQ13258 359 aa8.65□□□□□ -1.02
CDH12-204ENST00000518209 NBPF26B4DH59 902 aa8.64□□□□□ -1.03
CDH12-204ENST00000518209 NFX1Q12986 1120 aaKnown RBP8.64□□□□□ -1.03
CDH12-204ENST00000518209 TATDN2Q93075 761 aa8.64□□□□□ -1.03
CDH12-204ENST00000518209 FAM198AQ9UFP1 575 aa8.64□□□□□ -1.03
CDH12-204ENST00000518209 FAM181BA6NEQ2 426 aa8.63□□□□□ -1.03
CDH12-204ENST00000518209 RNF223E7ERA6 249 aa8.63□□□□□ -1.03
CDH12-204ENST00000518209 TULP1O00294 542 aaPredicted RBP8.63□□□□□ -1.03
CDH12-204ENST00000518209 RBM26Q5T8P6 1007 aaKnown RBP8.63□□□□□ -1.03
CDH12-204ENST00000518209 TTC13Q8NBP0 860 aa8.63□□□□□ -1.03
CDH12-204ENST00000518209 PNMA3Q9UL41 463 aa8.63□□□□□ -1.03
CDH12-204ENST00000518209 RNF40O75150 1001 aa8.62□□□□□ -1.03
CDH12-204ENST00000518209 ZPR1O75312 459 aa8.62□□□□□ -1.03
CDH12-204ENST00000518209 FCHSD2O94868 740 aa8.62□□□□□ -1.03
CDH12-204ENST00000518209 COPS2P61201 443 aa8.62□□□□□ -1.03
CDH12-204ENST00000518209 ZNF697Q5TEC3 545 aa8.62□□□□□ -1.03
CDH12-204ENST00000518209 PADI6Q6TGC4 694 aa8.62□□□□□ -1.03
CDH12-204ENST00000518209 EMID1Q96A84 441 aaPredicted RBP8.62□□□□□ -1.03
CDH12-204ENST00000518209 BCANQ96GW7 911 aa8.62□□□□□ -1.03
CDH12-204ENST00000518209 GDF9O60383 454 aa8.61□□□□□ -1.03
CDH12-204ENST00000518209 NUDT18Q6ZVK8 323 aa8.61□□□□□ -1.03
CDH12-204ENST00000518209 CRIPAKQ8N1N5 446 aa8.61□□□□□ -1.03
CDH12-204ENST00000518209 C11orf95C9JLR9 678 aaPredicted RBP8.6□□□□□ -1.03
CDH12-204ENST00000518209 SMAPO00193 183 aa8.6□□□□□ -1.03
CDH12-204ENST00000518209 TNFRSF10AO00220 468 aa8.6□□□□□ -1.03
CDH12-204ENST00000518209 ANKLE1Q8NAG6 615 aa8.59□□□□□ -1.03
CDH12-204ENST00000518209 C3orf80F5H4A9 247 aa8.58□□□□□ -1.04
CDH12-204ENST00000518209 HIC1Q14526 733 aa8.58□□□□□ -1.04
CDH12-204ENST00000518209 PRKCSHP14314 528 aaPredicted RBP8.55□□□□□ -1.04
CDH12-204ENST00000518209 LMOD2Q6P5Q4 547 aa8.55□□□□□ -1.04
CDH12-204ENST00000518209 GPIHBP1Q8IV16 184 aa8.55□□□□□ -1.04
CDH12-204ENST00000518209 RBM46Q8TBY0 533 aaKnown RBP8.55□□□□□ -1.04
CDH12-204ENST00000518209 EYA1Q99502 592 aa8.55□□□□□ -1.04
CDH12-204ENST00000518209 GMPR2Q9P2T1 348 aaKnown RBP8.55□□□□□ -1.04
CDH12-204ENST00000518209 GNPATO15228 680 aa8.54□□□□□ -1.04
CDH12-204ENST00000518209 SUZ12Q15022 739 aaKnown RBP8.54□□□□□ -1.04
CDH12-204ENST00000518209 LIAT1Q6ZQX7 453 aa8.54□□□□□ -1.04
CDH12-204ENST00000518209 PRR14Q9BWN1 585 aa8.54□□□□□ -1.04
CDH12-204ENST00000518209 ADGRG1Q9Y653 693 aa8.53□□□□□ -1.04
CDH12-204ENST00000518209 AXIN1O15169 862 aa8.52□□□□□ -1.05
CDH12-204ENST00000518209 OATP04181 439 aa8.52□□□□□ -1.05
CDH12-204ENST00000518209 SLC4A3P48751 1232 aa8.52□□□□□ -1.05
CDH12-204ENST00000518209 SLF2Q8IX21 1173 aa8.52□□□□□ -1.05
CDH12-204ENST00000518209 DACH1Q9UI36 760 aa8.52□□□□□ -1.05
CDH12-204ENST00000518209 GPR37O15354 613 aa8.51□□□□□ -1.05
CDH12-204ENST00000518209 AVPP01185 164 aa8.51□□□□□ -1.05
CDH12-204ENST00000518209 CTC1Q2NKJ3 1217 aa8.51□□□□□ -1.05
CDH12-204ENST00000518209 DNAJB2P25686 324 aa8.5□□□□□ -1.05
CDH12-204ENST00000518209 PCDHB3Q9Y5E6 796 aa8.5□□□□□ -1.05
CDH12-204ENST00000518209 TERTO14746 1132 aaKnown RBP8.49□□□□□ -1.05
CDH12-204ENST00000518209 FECHP22830 423 aa8.49□□□□□ -1.05
CDH12-204ENST00000518209 FAM161AQ3B820 660 aa8.49□□□□□ -1.05
CDH12-204ENST00000518209 SWT1Q5T5J6 900 aaKnown RBP8.49□□□□□ -1.05
CDH12-204ENST00000518209 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDH12-204ENST00000518209 RCCD1A6NED2 376 aa8.47□□□□□ -1.05
CDH12-204ENST00000518209 PXYLP1Q8TE99 480 aa8.47□□□□□ -1.05
CDH12-204ENST00000518209 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.46□□□□□ -1.06
CDH12-204ENST00000518209 PPEF1O14829 653 aaPredicted RBP8.46□□□□□ -1.06
CDH12-204ENST00000518209 SMCPP49901 116 aaPredicted RBP8.46□□□□□ -1.06
CDH12-204ENST00000518209 TMEM134Q9H6X4 195 aa8.46□□□□□ -1.06
CDH12-204ENST00000518209 LCE2CQ5TA81 110 aa8.45□□□□□ -1.06
CDH12-204ENST00000518209 METTL3Q86U44 580 aaKnown RBP8.45□□□□□ -1.06
CDH12-204ENST00000518209 S1PR4O95977 384 aa8.44□□□□□ -1.06
CDH12-204ENST00000518209 FOXC1Q12948 553 aa8.44□□□□□ -1.06
CDH12-204ENST00000518209 BLOC1S3Q6QNY0 202 aa8.44□□□□□ -1.06
CDH12-204ENST00000518209 PKD2L1Q9P0L9 805 aa8.44□□□□□ -1.06
CDH12-204ENST00000518209 MAP2K5Q13163 448 aa8.42□□□□□ -1.06
CDH12-204ENST00000518209 MINK1Q8N4C8 1332 aaPredicted RBP8.41□□□□□ -1.06
CDH12-204ENST00000518209 TLL1O43897 1013 aa8.41□□□□□ -1.06
CDH12-204ENST00000518209 TPRNQ4KMQ1 711 aa8.41□□□□□ -1.06
CDH12-204ENST00000518209 ZSCAN1Q8NBB4 408 aa8.41□□□□□ -1.06
CDH12-204ENST00000518209 TOR4AQ9NXH8 423 aa8.41□□□□□ -1.06
CDH12-204ENST00000518209 RSPH4AQ5TD94 716 aa8.4□□□□□ -1.06
CDH12-204ENST00000518209 CYP4X1Q8N118 509 aa8.4□□□□□ -1.06
CDH12-204ENST00000518209 SENP2Q9HC62 589 aa8.4□□□□□ -1.06
CDH12-204ENST00000518209 IRF6O14896 467 aa8.39□□□□□ -1.07
CDH12-204ENST00000518209 SLC16A10Q8TF71 515 aa8.39□□□□□ -1.07
CDH12-204ENST00000518209 DAXXQ9UER7 740 aaPredicted RBP8.38□□□□□ -1.07
CDH12-204ENST00000518209 ADH1BP00325 375 aa8.37□□□□□ -1.07
CDH12-204ENST00000518209 TRIM47Q96LD4 638 aa8.37□□□□□ -1.07
CDH12-204ENST00000518209 SNRPBP14678 240 aaKnown RBP8.36□□□□□ -1.07
CDH12-204ENST00000518209 KMT5BQ4FZB7 885 aa8.36□□□□□ -1.07
CDH12-204ENST00000518209 PLA2G2CQ5R387 149 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms