RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 MEX3CQ5U5Q3 659 aaKnown RBP15.72■□□□□ 0.11
SH2D4A-202ENST00000518040 SLC26A8Q96RN1 970 aa15.71■□□□□ 0.11
SH2D4A-202ENST00000518040 KANK1Q14678 1352 aa15.7■□□□□ 0.1
SH2D4A-202ENST00000518040 TRIM52Q96A61 297 aa15.7■□□□□ 0.1
SH2D4A-202ENST00000518040 CDK12Q9NYV4 1490 aaPredicted RBP15.69■□□□□ 0.1
SH2D4A-202ENST00000518040 ERBINQ96RT1 1412 aa15.69■□□□□ 0.1
SH2D4A-202ENST00000518040 COL16A1Q07092 1604 aaPredicted RBP15.69■□□□□ 0.1
SH2D4A-202ENST00000518040 RXRBP28702 533 aa15.69■□□□□ 0.1
SH2D4A-202ENST00000518040 NCOA3Q9Y6Q9 1424 aa15.69■□□□□ 0.1
SH2D4A-202ENST00000518040 RBM33Q96EV2 1170 aaKnown RBP15.68■□□□□ 0.1
SH2D4A-202ENST00000518040 C1QBPQ07021 282 aaKnown RBP15.67■□□□□ 0.1
SH2D4A-202ENST00000518040 IDI1Q13907 227 aa15.67■□□□□ 0.1
SH2D4A-202ENST00000518040 MYOM3Q5VTT5 1437 aa15.67■□□□□ 0.1
SH2D4A-202ENST00000518040 BCANQ96GW7 911 aa15.67■□□□□ 0.1
SH2D4A-202ENST00000518040 LRP6O75581 1613 aa15.66■□□□□ 0.1
SH2D4A-202ENST00000518040 KIF15Q9NS87 1388 aa15.66■□□□□ 0.1
SH2D4A-202ENST00000518040 HDGFP51858 240 aaKnown RBP15.65■□□□□ 0.1
SH2D4A-202ENST00000518040 SLC52A1Q9NWF4 448 aa15.64■□□□□ 0.09
SH2D4A-202ENST00000518040 SHPRHQ149N8 1683 aa15.64■□□□□ 0.09
SH2D4A-202ENST00000518040 LMTK2Q8IWU2 1503 aa15.64■□□□□ 0.09
SH2D4A-202ENST00000518040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.092e-7■■□□□ 13.4
SH2D4A-202ENST00000518040 ADGRB3O60242 1522 aa15.63■□□□□ 0.09
SH2D4A-202ENST00000518040 AHDC1Q5TGY3 1603 aaPredicted RBP15.63■□□□□ 0.09
SH2D4A-202ENST00000518040 CADPS2Q86UW7 1296 aa15.63■□□□□ 0.09
SH2D4A-202ENST00000518040 CHD2O14647 1828 aaKnown RBP15.61■□□□□ 0.09
SH2D4A-202ENST00000518040 PLEKHG1Q9ULL1 1385 aa15.61■□□□□ 0.09
SH2D4A-202ENST00000518040 C14orf37Q86TY3 774 aa15.6■□□□□ 0.09
SH2D4A-202ENST00000518040 NOS1P29475 1434 aa15.6■□□□□ 0.09
SH2D4A-202ENST00000518040 ATF3P18847 181 aa15.6■□□□□ 0.09
SH2D4A-202ENST00000518040 KCNA4P22459 653 aa15.6■□□□□ 0.09
SH2D4A-202ENST00000518040 C19orf44Q9H6X5 657 aa15.6■□□□□ 0.09
SH2D4A-202ENST00000518040 RRP7BPQ9NSQ0 103 aa15.59■□□□□ 0.09
SH2D4A-202ENST00000518040 TBX22Q9Y458 520 aa15.59■□□□□ 0.09
SH2D4A-202ENST00000518040 PPP1R15AO75807 674 aaPredicted RBP15.57■□□□□ 0.08
SH2D4A-202ENST00000518040 AFF2P51816 1311 aa15.56■□□□□ 0.08
SH2D4A-202ENST00000518040 PIK3R4Q99570 1358 aa15.56■□□□□ 0.08
SH2D4A-202ENST00000518040 ZFYVE9O95405 1425 aa15.56■□□□□ 0.08
SH2D4A-202ENST00000518040 CROCC2H7BZ55 1655 aa15.55■□□□□ 0.08
SH2D4A-202ENST00000518040 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.55■□□□□ 0.08
SH2D4A-202ENST00000518040 RPRD2Q5VT52 1461 aaKnown RBP15.55■□□□□ 0.08
SH2D4A-202ENST00000518040 RBM6P78332 1123 aaKnown RBP15.54■□□□□ 0.08
SH2D4A-202ENST00000518040 ABCC5O15440 1437 aa15.54■□□□□ 0.08
SH2D4A-202ENST00000518040 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.54■□□□□ 0.08
SH2D4A-202ENST00000518040 NUTM2BA6NNL0 878 aaPredicted RBP15.54■□□□□ 0.08
SH2D4A-202ENST00000518040 NUTM2EB1AL46 878 aaPredicted RBP15.54■□□□□ 0.08
SH2D4A-202ENST00000518040 NUTM2AQ8IVF1 878 aaPredicted RBP15.54■□□□□ 0.08
SH2D4A-202ENST00000518040 RIMS2Q9UQ26 1411 aa15.54■□□□□ 0.08
SH2D4A-202ENST00000518040 DIP2AQ14689 1571 aa15.53■□□□□ 0.08
SH2D4A-202ENST00000518040 ANKRD30AQ9BXX3 1397 aa15.52■□□□□ 0.08
SH2D4A-202ENST00000518040 DCCP43146 1447 aa15.51■□□□□ 0.07
SH2D4A-202ENST00000518040 SETD5Q9C0A6 1442 aa15.51■□□□□ 0.07
SH2D4A-202ENST00000518040 BRINP3Q76B58 766 aa15.51■□□□□ 0.07
SH2D4A-202ENST00000518040 RGS12O14924 1447 aa15.51■□□□□ 0.07
SH2D4A-202ENST00000518040 LRRC59Q96AG4 307 aaKnown RBP15.51■□□□□ 0.07
SH2D4A-202ENST00000518040 NGLY1Q96IV0 654 aa15.51■□□□□ 0.07
SH2D4A-202ENST00000518040 QTRT2Q9H974 415 aaKnown RBP15.51■□□□□ 0.07
SH2D4A-202ENST00000518040 DAPK1P53355 1430 aa15.5■□□□□ 0.07
SH2D4A-202ENST00000518040 VPS8Q8N3P4 1428 aa15.5■□□□□ 0.07
SH2D4A-202ENST00000518040 NUTM2DQ5VT03 806 aaPredicted RBP15.5■□□□□ 0.07
SH2D4A-202ENST00000518040 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
SH2D4A-202ENST00000518040 ZRANB1Q9UGI0 708 aa15.49■□□□□ 0.07
SH2D4A-202ENST00000518040 SRCAPQ6ZRS2 3230 aa15.49■□□□□ 0.07
SH2D4A-202ENST00000518040 KANK4Q5T7N3 995 aaPredicted RBP15.48■□□□□ 0.07
SH2D4A-202ENST00000518040 TMEM131LA2VDJ0 1609 aa15.47■□□□□ 0.07
SH2D4A-202ENST00000518040 PTPN23Q9H3S7 1636 aa15.47■□□□□ 0.07
SH2D4A-202ENST00000518040 C8orf37Q96NL8 207 aa15.47■□□□□ 0.07
SH2D4A-202ENST00000518040 ADAMTS13Q76LX8 1427 aa15.47■□□□□ 0.07
SH2D4A-202ENST00000518040 ASXL1Q8IXJ9 1541 aa15.46■□□□□ 0.07
SH2D4A-202ENST00000518040 GCC2Q8IWJ2 1684 aa15.46■□□□□ 0.07
SH2D4A-202ENST00000518040 TRPM2O94759 1503 aa15.46■□□□□ 0.07
SH2D4A-202ENST00000518040 MYO5BQ9ULV0 1848 aa15.45■□□□□ 0.06
SH2D4A-202ENST00000518040 NHSL1Q5SYE7 1610 aa15.44■□□□□ 0.06
SH2D4A-202ENST00000518040 AMOTL2Q9Y2J4 779 aa15.44■□□□□ 0.06
SH2D4A-202ENST00000518040 CCDC125Q86Z20 511 aa15.43■□□□□ 0.06
SH2D4A-202ENST00000518040 CHIC2Q9UKJ5 165 aa15.42■□□□□ 0.06
SH2D4A-202ENST00000518040 PNPLA6Q8IY17 1366 aa15.42■□□□□ 0.06
SH2D4A-202ENST00000518040 CHGAP10645 457 aaKnown RBP15.41■□□□□ 0.06
SH2D4A-202ENST00000518040 MST1RQ04912 1400 aa15.41■□□□□ 0.06
SH2D4A-202ENST00000518040 ADGRL2O95490 1459 aa15.4■□□□□ 0.06
SH2D4A-202ENST00000518040 TRPC5Q9UL62 973 aaPredicted RBP15.39■□□□□ 0.05
SH2D4A-202ENST00000518040 PTPRUQ92729 1446 aa15.38■□□□□ 0.05
SH2D4A-202ENST00000518040 ANKRD50Q9ULJ7 1429 aa15.38■□□□□ 0.05
SH2D4A-202ENST00000518040 USP21Q9UK80 565 aa15.38■□□□□ 0.05
SH2D4A-202ENST00000518040 ADAMTS2O95450 1211 aa15.36■□□□□ 0.05
SH2D4A-202ENST00000518040 APLP2Q06481 763 aa15.36■□□□□ 0.05
SH2D4A-202ENST00000518040 XRN1Q8IZH2 1706 aaKnown RBP15.35■□□□□ 0.05
SH2D4A-202ENST00000518040 PTCH1Q13635 1447 aa15.35■□□□□ 0.05
SH2D4A-202ENST00000518040 UNC13BO14795 1591 aa15.35■□□□□ 0.05
SH2D4A-202ENST00000518040 FNBP4Q8N3X1 1017 aaPredicted RBP15.35■□□□□ 0.05
SH2D4A-202ENST00000518040 ADGRL3Q9HAR2 1447 aa15.34■□□□□ 0.05
SH2D4A-202ENST00000518040 SETBP1Q9Y6X0 1596 aa15.34■□□□□ 0.05
SH2D4A-202ENST00000518040 ATRNO75882 1429 aa15.32■□□□□ 0.04
SH2D4A-202ENST00000518040 LAMC1P11047 1609 aa15.31■□□□□ 0.04
SH2D4A-202ENST00000518040 DDX17Q92841 729 aaKnown RBP15.31■□□□□ 0.04
SH2D4A-202ENST00000518040 SOS2Q07890 1332 aaPredicted RBP15.3■□□□□ 0.04
SH2D4A-202ENST00000518040 E9PCH4 1651 aa15.3■□□□□ 0.04
SH2D4A-202ENST00000518040 C1orf167Q5SNV9 1468 aa15.29■□□□□ 0.04
SH2D4A-202ENST00000518040 IQGAP3Q86VI3 1631 aa15.28■□□□□ 0.04
SH2D4A-202ENST00000518040 NRXN3Q9Y4C0 1643 aa15.28■□□□□ 0.04
SH2D4A-202ENST00000518040 METP08581 1390 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms