RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 IDI1Q13907 227 aa14.23□□□□□ -0.13
LINCR-0001-201ENST00000517732 SLC26A8Q96RN1 970 aa14.23□□□□□ -0.13
LINCR-0001-201ENST00000517732 JCADQ9P266 1359 aa14.22□□□□□ -0.13
LINCR-0001-201ENST00000517732 GCC2Q8IWJ2 1684 aa14.21□□□□□ -0.13
LINCR-0001-201ENST00000517732 NOS1P29475 1434 aa14.2□□□□□ -0.14
LINCR-0001-201ENST00000517732 HDGFP51858 240 aaKnown RBP14.19□□□□□ -0.14
LINCR-0001-201ENST00000517732 RBM33Q96EV2 1170 aaKnown RBP14.19□□□□□ -0.14
LINCR-0001-201ENST00000517732 SLC52A1Q9NWF4 448 aa14.19□□□□□ -0.14
LINCR-0001-201ENST00000517732 FGD6Q6ZV73 1430 aa14.18□□□□□ -0.14
LINCR-0001-201ENST00000517732 PPP1R15AO75807 674 aaPredicted RBP14.18□□□□□ -0.14
LINCR-0001-201ENST00000517732 SLAIN2Q9P270 581 aa14.18□□□□□ -0.14
LINCR-0001-201ENST00000517732 RPRD2Q5VT52 1461 aaKnown RBP14.18□□□□□ -0.14
LINCR-0001-201ENST00000517732 COL16A1Q07092 1604 aaPredicted RBP14.17□□□□□ -0.14
LINCR-0001-201ENST00000517732 CHIC2Q9UKJ5 165 aa14.17□□□□□ -0.14
LINCR-0001-201ENST00000517732 MEX3CQ5U5Q3 659 aaKnown RBP14.16□□□□□ -0.14
LINCR-0001-201ENST00000517732 PLEKHG1Q9ULL1 1385 aa14.16□□□□□ -0.14
LINCR-0001-201ENST00000517732 SHPRHQ149N8 1683 aa14.15□□□□□ -0.14
LINCR-0001-201ENST00000517732 C14orf37Q86TY3 774 aa14.15□□□□□ -0.14
LINCR-0001-201ENST00000517732 RIMS2Q9UQ26 1411 aa14.14□□□□□ -0.15
LINCR-0001-201ENST00000517732 NCOA3Q9Y6Q9 1424 aa14.14□□□□□ -0.15
LINCR-0001-201ENST00000517732 SPATA31A6Q5VVP1 1343 aa14.14□□□□□ -0.15
LINCR-0001-201ENST00000517732 DIP2AQ14689 1571 aa14.13□□□□□ -0.15
LINCR-0001-201ENST00000517732 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.13□□□□□ -0.15
LINCR-0001-201ENST00000517732 TMEM131LA2VDJ0 1609 aa14.13□□□□□ -0.15
LINCR-0001-201ENST00000517732 ZNF772Q68DY9 489 aaPredicted RBP14.13□□□□□ -0.15
LINCR-0001-201ENST00000517732 ZFYVE9O95405 1425 aa14.13□□□□□ -0.15
LINCR-0001-201ENST00000517732 ADGRL2O95490 1459 aa14.12□□□□□ -0.15
LINCR-0001-201ENST00000517732 AHDC1Q5TGY3 1603 aaPredicted RBP14.12□□□□□ -0.15
LINCR-0001-201ENST00000517732 LOC105371045A0A1W2PR82 267 aa14.11□□□□□ -0.15
LINCR-0001-201ENST00000517732 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.11□□□□□ -0.15
LINCR-0001-201ENST00000517732 ANKRD50Q9ULJ7 1429 aa14.1□□□□□ -0.15
LINCR-0001-201ENST00000517732 CADPS2Q86UW7 1296 aa14.1□□□□□ -0.15
LINCR-0001-201ENST00000517732 TBX22Q9Y458 520 aa14.1□□□□□ -0.15
LINCR-0001-201ENST00000517732 LRP6O75581 1613 aa14.09□□□□□ -0.15
LINCR-0001-201ENST00000517732 CHGAP10645 457 aaKnown RBP14.09□□□□□ -0.15
LINCR-0001-201ENST00000517732 ATF3P18847 181 aa14.09□□□□□ -0.15
LINCR-0001-201ENST00000517732 PIAS4Q8N2W9 510 aaPredicted RBP14.09□□□□□ -0.15
LINCR-0001-201ENST00000517732 TRIM52Q96A61 297 aa14.08□□□□□ -0.16
LINCR-0001-201ENST00000517732 TRPM2O94759 1503 aa14.08□□□□□ -0.16
LINCR-0001-201ENST00000517732 UNC13BO14795 1591 aa14.08□□□□□ -0.16
LINCR-0001-201ENST00000517732 PIK3R4Q99570 1358 aa14.08□□□□□ -0.16
LINCR-0001-201ENST00000517732 E9PCH4 1651 aa14.07□□□□□ -0.16
LINCR-0001-201ENST00000517732 C19orf44Q9H6X5 657 aa14.07□□□□□ -0.16
LINCR-0001-201ENST00000517732 FAM50AQ14320 339 aaKnown RBP14.06□□□□□ -0.16
LINCR-0001-201ENST00000517732 UPF1Q92900 1129 aaKnown RBP eCLIP14.05□□□□□ -0.16
LINCR-0001-201ENST00000517732 RXRBP28702 533 aa14.04□□□□□ -0.16
LINCR-0001-201ENST00000517732 ADAMTS13Q76LX8 1427 aa14.04□□□□□ -0.16
LINCR-0001-201ENST00000517732 CDK12Q9NYV4 1490 aaPredicted RBP14.04□□□□□ -0.16
LINCR-0001-201ENST00000517732 IQGAP3Q86VI3 1631 aa14.03□□□□□ -0.16
LINCR-0001-201ENST00000517732 NHSL1Q5SYE7 1610 aa14.02□□□□□ -0.16
LINCR-0001-201ENST00000517732 DCCP43146 1447 aa14.02□□□□□ -0.16
LINCR-0001-201ENST00000517732 NUTM2BA6NNL0 878 aaPredicted RBP14.02□□□□□ -0.17
LINCR-0001-201ENST00000517732 NUTM2EB1AL46 878 aaPredicted RBP14.02□□□□□ -0.17
LINCR-0001-201ENST00000517732 NUTM2DQ5VT03 806 aaPredicted RBP14.02□□□□□ -0.17
LINCR-0001-201ENST00000517732 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.17
LINCR-0001-201ENST00000517732 ASXL1Q8IXJ9 1541 aa14□□□□□ -0.17
LINCR-0001-201ENST00000517732 BRINP3Q76B58 766 aa14□□□□□ -0.17
LINCR-0001-201ENST00000517732 AMOTL2Q9Y2J4 779 aa14□□□□□ -0.17
LINCR-0001-201ENST00000517732 XRN1Q8IZH2 1706 aaKnown RBP14□□□□□ -0.17
LINCR-0001-201ENST00000517732 SPHKAPQ2M3C7 1700 aa13.98□□□□□ -0.17
LINCR-0001-201ENST00000517732 AFF2P51816 1311 aa13.98□□□□□ -0.17
LINCR-0001-201ENST00000517732 SETD5Q9C0A6 1442 aa13.98□□□□□ -0.17
LINCR-0001-201ENST00000517732 NRXN3Q9Y4C0 1643 aa13.97□□□□□ -0.17
LINCR-0001-201ENST00000517732 SETBP1Q9Y6X0 1596 aa13.96□□□□□ -0.17
LINCR-0001-201ENST00000517732 LRRC59Q96AG4 307 aaKnown RBP13.96□□□□□ -0.17
LINCR-0001-201ENST00000517732 MST1RQ04912 1400 aa13.96□□□□□ -0.18
LINCR-0001-201ENST00000517732 PTPRUQ92729 1446 aa13.96□□□□□ -0.18
LINCR-0001-201ENST00000517732 NALCNQ8IZF0 1738 aa13.95□□□□□ -0.18
LINCR-0001-201ENST00000517732 KIF1BO60333 1816 aa13.94□□□□□ -0.18
LINCR-0001-201ENST00000517732 NUP155O75694 1391 aa13.94□□□□□ -0.18
LINCR-0001-201ENST00000517732 ROCK1Q13464 1354 aa13.94□□□□□ -0.18
LINCR-0001-201ENST00000517732 RGS12O14924 1447 aa13.93□□□□□ -0.18
LINCR-0001-201ENST00000517732 RBM6P78332 1123 aaKnown RBP13.93□□□□□ -0.18
LINCR-0001-201ENST00000517732 ZNF326Q5BKZ1 582 aaKnown RBP13.93□□□□□ -0.18
LINCR-0001-201ENST00000517732 C8orf37Q96NL8 207 aa13.93□□□□□ -0.18
LINCR-0001-201ENST00000517732 ADGRL3Q9HAR2 1447 aa13.92□□□□□ -0.18
LINCR-0001-201ENST00000517732 NGLY1Q96IV0 654 aa13.91□□□□□ -0.18
LINCR-0001-201ENST00000517732 QTRT2Q9H974 415 aaKnown RBP13.91□□□□□ -0.18
LINCR-0001-201ENST00000517732 PNPLA6Q8IY17 1366 aa13.91□□□□□ -0.18
LINCR-0001-201ENST00000517732 ATAD2Q6PL18 1390 aa13.88□□□□□ -0.19
LINCR-0001-201ENST00000517732 LAMC1P11047 1609 aa13.88□□□□□ -0.19
LINCR-0001-201ENST00000517732 METP08581 1390 aa13.87□□□□□ -0.19
LINCR-0001-201ENST00000517732 MSH5O43196 834 aa13.87□□□□□ -0.19
LINCR-0001-201ENST00000517732 NEXMIFQ5QGS0 1516 aa13.86□□□□□ -0.19
LINCR-0001-201ENST00000517732 ADAMTS2O95450 1211 aa13.86□□□□□ -0.19
LINCR-0001-201ENST00000517732 CLTCL1P53675 1640 aa13.86□□□□□ -0.19
LINCR-0001-201ENST00000517732 MARF1Q9Y4F3 1742 aaKnown RBP13.85□□□□□ -0.19
LINCR-0001-201ENST00000517732 ITGAEP38570 1179 aa13.85□□□□□ -0.19
LINCR-0001-201ENST00000517732 DDX17Q92841 729 aaKnown RBP13.85□□□□□ -0.19
LINCR-0001-201ENST00000517732 C1orf167Q5SNV9 1468 aa13.85□□□□□ -0.19
LINCR-0001-201ENST00000517732 PTCH1Q13635 1447 aa13.84□□□□□ -0.19
LINCR-0001-201ENST00000517732 USP21Q9UK80 565 aa13.84□□□□□ -0.19
LINCR-0001-201ENST00000517732 TRPC5Q9UL62 973 aaPredicted RBP13.84□□□□□ -0.19
LINCR-0001-201ENST00000517732 COL22A1Q8NFW1 1626 aaPredicted RBP13.83□□□□□ -0.2
LINCR-0001-201ENST00000517732 ZRANB1Q9UGI0 708 aa13.81□□□□□ -0.2
LINCR-0001-201ENST00000517732 SOS2Q07890 1332 aaPredicted RBP13.8□□□□□ -0.2
LINCR-0001-201ENST00000517732 VGFO15240 615 aaPredicted RBP13.79□□□□□ -0.2
LINCR-0001-201ENST00000517732 PPLO60437 1756 aa13.78□□□□□ -0.2
LINCR-0001-201ENST00000517732 ORAI2Q96SN7 254 aa13.78□□□□□ -0.2
LINCR-0001-201ENST00000517732 HFM1A2PYH4 1435 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms