RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 MORC1Q86VD1 984 aa13.13□□□□□ -0.31
EFCAB13-203ENST00000517484 C14orf93Q9H972 538 aaKnown RBP13.13□□□□□ -0.31
EFCAB13-203ENST00000517484 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
EFCAB13-203ENST00000517484 WDR43Q15061 677 aaKnown RBP eCLIP13.12□□□□□ -0.31
EFCAB13-203ENST00000517484 MAST1Q9Y2H9 1570 aa13.12□□□□□ -0.31
EFCAB13-203ENST00000517484 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
EFCAB13-203ENST00000517484 NUTM2GQ5VZR2 741 aa13.12□□□□□ -0.31
EFCAB13-203ENST00000517484 PMFBP1Q8TBY8 1022 aa13.12□□□□□ -0.31
EFCAB13-203ENST00000517484 CNTLNQ9NXG0 1405 aa13.12□□□□□ -0.31
EFCAB13-203ENST00000517484 CCER2I3L3R5 266 aa13.11□□□□□ -0.31
EFCAB13-203ENST00000517484 LTKP29376 864 aa13.11□□□□□ -0.31
EFCAB13-203ENST00000517484 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
EFCAB13-203ENST00000517484 KIDINS220Q9ULH0 1771 aa13.11□□□□□ -0.31
EFCAB13-203ENST00000517484 U2SURPO15042 1029 aaKnown RBP13.1□□□□□ -0.31
EFCAB13-203ENST00000517484 PAK3O75914 559 aaPredicted RBP13.1□□□□□ -0.31
EFCAB13-203ENST00000517484 DIP2BQ9P265 1576 aa13.1□□□□□ -0.31
EFCAB13-203ENST00000517484 KTN1Q86UP2 1357 aaKnown RBP13.1□□□□□ -0.31
EFCAB13-203ENST00000517484 CDK19Q9BWU1 502 aa13.09□□□□□ -0.31
EFCAB13-203ENST00000517484 HECW2Q9P2P5 1572 aa13.09□□□□□ -0.31
EFCAB13-203ENST00000517484 SPATA31E1Q6ZUB1 1445 aa13.09□□□□□ -0.31
EFCAB13-203ENST00000517484 EIF3AQ14152 1382 aaKnown RBP13.09□□□□□ -0.31
EFCAB13-203ENST00000517484 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
EFCAB13-203ENST00000517484 ARAP3Q8WWN8 1544 aa13.07□□□□□ -0.32
EFCAB13-203ENST00000517484 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
EFCAB13-203ENST00000517484 TNRQ92752 1358 aa13.07□□□□□ -0.32
EFCAB13-203ENST00000517484 SLC24A1O60721 1099 aa13.07□□□□□ -0.32
EFCAB13-203ENST00000517484 PLXNC1O60486 1568 aa13.07□□□□□ -0.32
EFCAB13-203ENST00000517484 ABCA6Q8N139 1617 aa13.06□□□□□ -0.32
EFCAB13-203ENST00000517484 XPCQ01831 940 aaPredicted RBP13.06□□□□□ -0.32
EFCAB13-203ENST00000517484 THEMISQ8N1K5 641 aaPredicted RBP13.06□□□□□ -0.32
EFCAB13-203ENST00000517484 RALGAPBQ86X10 1494 aa13.05□□□□□ -0.32
EFCAB13-203ENST00000517484 CARD14Q9BXL6 1004 aa13.05□□□□□ -0.32
EFCAB13-203ENST00000517484 AMOTL2Q9Y2J4 779 aa13.04□□□□□ -0.32
EFCAB13-203ENST00000517484 RPGRIP1LQ68CZ1 1315 aa13.04□□□□□ -0.32
EFCAB13-203ENST00000517484 PTPRTO14522 1441 aa13.04□□□□□ -0.32
EFCAB13-203ENST00000517484 ABCC3O15438 1527 aa13.03□□□□□ -0.32
EFCAB13-203ENST00000517484 INO80Q9ULG1 1556 aaPredicted RBP13.03□□□□□ -0.32
EFCAB13-203ENST00000517484 NLRP13Q86W25 1043 aa13.03□□□□□ -0.32
EFCAB13-203ENST00000517484 NGDNQ8NEJ9 315 aaKnown RBP13.03□□□□□ -0.32
EFCAB13-203ENST00000517484 BCL11AQ9H165 835 aa13.03□□□□□ -0.32
EFCAB13-203ENST00000517484 UHRF1BP1Q6BDS2 1440 aa13.03□□□□□ -0.32
EFCAB13-203ENST00000517484 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.03□□□□□ -0.32
EFCAB13-203ENST00000517484 FRMPD1Q5SYB0 1578 aa13.03□□□□□ -0.32
EFCAB13-203ENST00000517484 DIP2CQ9Y2E4 1556 aa13.03□□□□□ -0.32
EFCAB13-203ENST00000517484 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
EFCAB13-203ENST00000517484 RALBP1Q15311 655 aa13.02□□□□□ -0.32
EFCAB13-203ENST00000517484 ADAMTS8Q9UP79 889 aa13.02□□□□□ -0.32
EFCAB13-203ENST00000517484 MYBBP1AQ9BQG0 1328 aaKnown RBP13.02□□□□□ -0.33
EFCAB13-203ENST00000517484 E9PCH4 1651 aa13.02□□□□□ -0.33
EFCAB13-203ENST00000517484 HDGFL2Q7Z4V5 671 aaPredicted RBP13.02□□□□□ -0.33
EFCAB13-203ENST00000517484 STAC3Q96MF2 364 aa13.02□□□□□ -0.33
EFCAB13-203ENST00000517484 PLEKHH1Q9ULM0 1364 aa13.01□□□□□ -0.33
EFCAB13-203ENST00000517484 KDM5DQ9BY66 1539 aa13.01□□□□□ -0.33
EFCAB13-203ENST00000517484 U2AF1L5P0DN76 240 aaPredicted RBP13.01□□□□□ -0.33
EFCAB13-203ENST00000517484 U2AF1Q01081 240 aaKnown RBP eCLIP13.01□□□□□ -0.33
EFCAB13-203ENST00000517484 RIMS2Q9UQ26 1411 aa13.01□□□□□ -0.33
EFCAB13-203ENST00000517484 CLTCL1P53675 1640 aa13.01□□□□□ -0.33
EFCAB13-203ENST00000517484 PER1O15534 1290 aaPredicted RBP13.01□□□□□ -0.33
EFCAB13-203ENST00000517484 IQGAP3Q86VI3 1631 aa13□□□□□ -0.33
EFCAB13-203ENST00000517484 CEP152O94986 1710 aa13□□□□□ -0.33
EFCAB13-203ENST00000517484 SCAF11Q99590 1463 aaKnown RBP13□□□□□ -0.33
EFCAB13-203ENST00000517484 PPP2R1AP30153 589 aa13□□□□□ -0.33
EFCAB13-203ENST00000517484 MTHFSP49914 203 aa13□□□□□ -0.33
EFCAB13-203ENST00000517484 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
EFCAB13-203ENST00000517484 UNC13BO14795 1591 aa12.99□□□□□ -0.33
EFCAB13-203ENST00000517484 ANKLE2Q86XL3 938 aa12.99□□□□□ -0.33
EFCAB13-203ENST00000517484 CDCA7LQ96GN5 454 aa12.99□□□□□ -0.33
EFCAB13-203ENST00000517484 TERF2IPQ9NYB0 399 aa12.99□□□□□ -0.33
EFCAB13-203ENST00000517484 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
EFCAB13-203ENST00000517484 PPP6R1Q9UPN7 881 aa12.98□□□□□ -0.33
EFCAB13-203ENST00000517484 METP08581 1390 aa12.98□□□□□ -0.33
EFCAB13-203ENST00000517484 KCNA6P17658 529 aa12.98□□□□□ -0.33
EFCAB13-203ENST00000517484 KDM5CP41229 1560 aa12.98□□□□□ -0.33
EFCAB13-203ENST00000517484 EFCAB6Q5THR3 1501 aa12.98□□□□□ -0.33
EFCAB13-203ENST00000517484 PPRC1Q5VV67 1664 aaKnown RBP12.98□□□□□ -0.33
EFCAB13-203ENST00000517484 LAS1LQ9Y4W2 734 aaKnown RBP12.97□□□□□ -0.33
EFCAB13-203ENST00000517484 APAF1O14727 1248 aa12.97□□□□□ -0.33
EFCAB13-203ENST00000517484 NUDT16Q96DE0 195 aaKnown RBP12.97□□□□□ -0.33
EFCAB13-203ENST00000517484 CFAP74Q9C0B2 1584 aa12.97□□□□□ -0.33
EFCAB13-203ENST00000517484 TRPM2O94759 1503 aa12.97□□□□□ -0.33
EFCAB13-203ENST00000517484 RRS1Q15050 365 aaKnown RBP12.96□□□□□ -0.33
EFCAB13-203ENST00000517484 NME9Q86XW9 330 aa12.96□□□□□ -0.33
EFCAB13-203ENST00000517484 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
EFCAB13-203ENST00000517484 MAP3K4Q9Y6R4 1608 aa12.95□□□□□ -0.34
EFCAB13-203ENST00000517484 CGNL1Q0VF96 1302 aa12.95□□□□□ -0.34
EFCAB13-203ENST00000517484 HMOX1P09601 288 aa12.95□□□□□ -0.34
EFCAB13-203ENST00000517484 ESCO1Q5FWF5 840 aa12.94□□□□□ -0.34
EFCAB13-203ENST00000517484 PROSER2Q86WR7 435 aaPredicted RBP12.94□□□□□ -0.34
EFCAB13-203ENST00000517484 NSD3Q9BZ95 1437 aa12.94□□□□□ -0.34
EFCAB13-203ENST00000517484 MAGI2Q86UL8 1455 aa12.94□□□□□ -0.34
EFCAB13-203ENST00000517484 RNF17Q9BXT8 1623 aaKnown RBP12.93□□□□□ -0.34
EFCAB13-203ENST00000517484 ERVK-7P63135 1459 aa12.93□□□□□ -0.34
EFCAB13-203ENST00000517484 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
EFCAB13-203ENST00000517484 BCORL1Q5H9F3 1711 aa12.93□□□□□ -0.34
EFCAB13-203ENST00000517484 WASLO00401 505 aaPredicted RBP12.93□□□□□ -0.34
EFCAB13-203ENST00000517484 PLIN1O60240 522 aa12.93□□□□□ -0.34
EFCAB13-203ENST00000517484 TET3O43151 1660 aa12.93□□□□□ -0.34
EFCAB13-203ENST00000517484 GPRASP1Q5JY77 1395 aa12.93□□□□□ -0.34
EFCAB13-203ENST00000517484 MROH1Q8NDA8 1641 aa12.92□□□□□ -0.34
EFCAB13-203ENST00000517484 GLI2P10070 1586 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms