RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 ERVK-7P63135 1459 aa4.57□□□□□ -1.68
SCARNA20.6-201ENST00000517251 SMG6Q86US8 1419 aaKnown RBP4.57□□□□□ -1.68
SCARNA20.6-201ENST00000517251 ZBED9Q6R2W3 1325 aa4.57□□□□□ -1.68
SCARNA20.6-201ENST00000517251 PLEKHD1A6NEE1 506 aa4.57□□□□□ -1.68
SCARNA20.6-201ENST00000517251 ANP32CO43423 234 aa4.57□□□□□ -1.68
SCARNA20.6-201ENST00000517251 IQSEC2Q5JU85 1478 aa4.56□□□□□ -1.68
SCARNA20.6-201ENST00000517251 NEO1Q92859 1461 aa4.56□□□□□ -1.68
SCARNA20.6-201ENST00000517251 SCAF11Q99590 1463 aaKnown RBP4.56□□□□□ -1.68
SCARNA20.6-201ENST00000517251 DLG5Q8TDM6 1919 aa4.56□□□□□ -1.68
SCARNA20.6-201ENST00000517251 PIK3C2GO75747 1445 aa4.56□□□□□ -1.68
SCARNA20.6-201ENST00000517251 NPATQ14207 1427 aa4.56□□□□□ -1.68
SCARNA20.6-201ENST00000517251 INSRP06213 1382 aa4.56□□□□□ -1.68
SCARNA20.6-201ENST00000517251 ITSN1Q15811 1721 aa4.56□□□□□ -1.68
SCARNA20.6-201ENST00000517251 TSHZ2Q9NRE2 1034 aa4.56□□□□□ -1.68
SCARNA20.6-201ENST00000517251 ZNF777Q9ULD5 760 aaPredicted RBP4.56□□□□□ -1.68
SCARNA20.6-201ENST00000517251 NOS1P29475 1434 aa4.55□□□□□ -1.68
SCARNA20.6-201ENST00000517251 NALCNQ8IZF0 1738 aa4.55□□□□□ -1.68
SCARNA20.6-201ENST00000517251 FMN2Q9NZ56 1722 aa4.55□□□□□ -1.68
SCARNA20.6-201ENST00000517251 KTN1Q86UP2 1357 aaKnown RBP4.55□□□□□ -1.68
SCARNA20.6-201ENST00000517251 RNF123Q5XPI4 1314 aa4.55□□□□□ -1.68
SCARNA20.6-201ENST00000517251 TESK2Q96S53 571 aa4.55□□□□□ -1.68
SCARNA20.6-201ENST00000517251 SPATA31D1Q6ZQQ2 1576 aa4.55□□□□□ -1.68
SCARNA20.6-201ENST00000517251 MARF1Q9Y4F3 1742 aaKnown RBP4.55□□□□□ -1.68
SCARNA20.6-201ENST00000517251 BRD4O60885 1362 aaPredicted RBP4.54□□□□□ -1.68
SCARNA20.6-201ENST00000517251 SBNO2Q9Y2G9 1366 aa4.54□□□□□ -1.68
SCARNA20.6-201ENST00000517251 CDC42BPGQ6DT37 1551 aa4.54□□□□□ -1.68
SCARNA20.6-201ENST00000517251 N4BP2Q86UW6 1770 aaPredicted RBP4.54□□□□□ -1.68
SCARNA20.6-201ENST00000517251 UBR1Q8IWV7 1749 aa4.54□□□□□ -1.68
SCARNA20.6-201ENST00000517251 AGLP35573 1532 aa4.53□□□□□ -1.68
SCARNA20.6-201ENST00000517251 RSPH4AQ5TD94 716 aa4.53□□□□□ -1.68
SCARNA20.6-201ENST00000517251 C3P01024 1663 aa4.53□□□□□ -1.68
SCARNA20.6-201ENST00000517251 USP54Q70EL1 1684 aa4.53□□□□□ -1.68
SCARNA20.6-201ENST00000517251 ARHGAP31Q2M1Z3 1444 aa4.53□□□□□ -1.68
SCARNA20.6-201ENST00000517251 COL3A1P02461 1466 aaPredicted RBP4.52□□□□□ -1.69
SCARNA20.6-201ENST00000517251 PTPRMP28827 1452 aa4.52□□□□□ -1.69
SCARNA20.6-201ENST00000517251 HNRNPUQ00839 825 aaKnown RBP eCLIP4.52□□□□□ -1.69
SCARNA20.6-201ENST00000517251 CPS1P31327 1500 aa4.51□□□□□ -1.69
SCARNA20.6-201ENST00000517251 MAP2P11137 1827 aaKnown RBP4.51□□□□□ -1.69
SCARNA20.6-201ENST00000517251 NLRP1Q9C000 1473 aa4.51□□□□□ -1.69
SCARNA20.6-201ENST00000517251 TSPY4P0CV99 314 aa4.51□□□□□ -1.69
SCARNA20.6-201ENST00000517251 TSPY10P0CW01 314 aa4.51□□□□□ -1.69
SCARNA20.6-201ENST00000517251 FKBP8Q14318 412 aa4.51□□□□□ -1.69
SCARNA20.6-201ENST00000517251 YEATS2Q9ULM3 1422 aa4.51□□□□□ -1.69
SCARNA20.6-201ENST00000517251 NPC1L1Q9UHC9 1359 aa4.51□□□□□ -1.69
SCARNA20.6-201ENST00000517251 FER1L4A9Z1Z3 1794 aa4.5□□□□□ -1.69
SCARNA20.6-201ENST00000517251 SPAG9O60271 1321 aaKnown RBP4.5□□□□□ -1.69
SCARNA20.6-201ENST00000517251 MYBBP1AQ9BQG0 1328 aaKnown RBP4.5□□□□□ -1.69
SCARNA20.6-201ENST00000517251 RGPD1P0DJD0 1748 aa4.5□□□□□ -1.69
SCARNA20.6-201ENST00000517251 ST20-MTHFSA0A0A6YYL1 179 aa4.5□□□□□ -1.69
SCARNA20.6-201ENST00000517251 NBPF1Q3BBV0 1214 aa4.5□□□□□ -1.69
SCARNA20.6-201ENST00000517251 CARD11Q9BXL7 1154 aa4.5□□□□□ -1.69
SCARNA20.6-201ENST00000517251 TUBGCP6Q96RT7 1819 aa4.5□□□□□ -1.69
SCARNA20.6-201ENST00000517251 DLC1Q96QB1 1528 aa4.5□□□□□ -1.69
SCARNA20.6-201ENST00000517251 CD109Q6YHK3 1445 aa4.49□□□□□ -1.69
SCARNA20.6-201ENST00000517251 PER1O15534 1290 aaPredicted RBP4.49□□□□□ -1.69
SCARNA20.6-201ENST00000517251 EFCAB2Q5VUJ9 269 aa4.49□□□□□ -1.69
SCARNA20.6-201ENST00000517251 BCANQ96GW7 911 aa4.49□□□□□ -1.69
SCARNA20.6-201ENST00000517251 MRS2Q9HD23 443 aa4.49□□□□□ -1.69
SCARNA20.6-201ENST00000517251 RGPD8O14715 1765 aaPredicted RBP4.49□□□□□ -1.69
SCARNA20.6-201ENST00000517251 ALKQ9UM73 1620 aa4.49□□□□□ -1.69
SCARNA20.6-201ENST00000517251 XRN1Q8IZH2 1706 aaKnown RBP4.49□□□□□ -1.69
SCARNA20.6-201ENST00000517251 CD163L1Q9NR16 1453 aa4.49□□□□□ -1.69
SCARNA20.6-201ENST00000517251 ZNF142P52746 1687 aaPredicted RBP4.48□□□□□ -1.69
SCARNA20.6-201ENST00000517251 ZFYVE9O95405 1425 aa4.48□□□□□ -1.69
SCARNA20.6-201ENST00000517251 LRRC37A3O60309 1634 aa4.48□□□□□ -1.69
SCARNA20.6-201ENST00000517251 AFAP1Q8N556 730 aa4.48□□□□□ -1.69
SCARNA20.6-201ENST00000517251 DCAF11Q8TEB1 546 aa4.48□□□□□ -1.69
SCARNA20.6-201ENST00000517251 PNISRQ8TF01 805 aaKnown RBP4.48□□□□□ -1.69
SCARNA20.6-201ENST00000517251 MED14O60244 1454 aa4.48□□□□□ -1.69
SCARNA20.6-201ENST00000517251 LRRC7Q96NW7 1537 aa4.47□□□□□ -1.69
SCARNA20.6-201ENST00000517251 ZNF326Q5BKZ1 582 aaKnown RBP4.47□□□□□ -1.69
SCARNA20.6-201ENST00000517251 NUDCQ9Y266 331 aa4.47□□□□□ -1.69
SCARNA20.6-201ENST00000517251 PLEKHH1Q9ULM0 1364 aa4.47□□□□□ -1.69
SCARNA20.6-201ENST00000517251 FAM208AQ9UK61 1670 aaKnown RBP4.47□□□□□ -1.69
SCARNA20.6-201ENST00000517251 ZNF521Q96K83 1311 aa4.46□□□□□ -1.69
SCARNA20.6-201ENST00000517251 PEAK1Q9H792 1746 aa4.46□□□□□ -1.69
SCARNA20.6-201ENST00000517251 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.46□□□□□ -1.69
SCARNA20.6-201ENST00000517251 EIF3AQ14152 1382 aaKnown RBP4.46□□□□□ -1.7
SCARNA20.6-201ENST00000517251 KANK1Q14678 1352 aa4.46□□□□□ -1.7
SCARNA20.6-201ENST00000517251 ERICH6BQ5W0A0 696 aa4.46□□□□□ -1.7
SCARNA20.6-201ENST00000517251 ADGRF5Q8IZF2 1346 aa4.46□□□□□ -1.7
SCARNA20.6-201ENST00000517251 WASHC2CQ9Y4E1 1318 aa4.46□□□□□ -1.7
SCARNA20.6-201ENST00000517251 IRX6P78412 446 aaPredicted RBP4.45□□□□□ -1.7
SCARNA20.6-201ENST00000517251 RALBP1Q15311 655 aa4.45□□□□□ -1.7
SCARNA20.6-201ENST00000517251 AMER1Q5JTC6 1135 aaPredicted RBP4.45□□□□□ -1.7
SCARNA20.6-201ENST00000517251 NLRP13Q86W25 1043 aa4.45□□□□□ -1.7
SCARNA20.6-201ENST00000517251 A2ML1A8K2U0 1454 aa4.44□□□□□ -1.7
SCARNA20.6-201ENST00000517251 NEFLP07196 543 aa4.44□□□□□ -1.7
SCARNA20.6-201ENST00000517251 FAM9BQ8IZU0 186 aa4.44□□□□□ -1.7
SCARNA20.6-201ENST00000517251 KDM2AQ9Y2K7 1162 aa4.44□□□□□ -1.7
SCARNA20.6-201ENST00000517251 NSD3Q9BZ95 1437 aa4.44□□□□□ -1.7
SCARNA20.6-201ENST00000517251 PIK3C2AO00443 1686 aa4.44□□□□□ -1.7
SCARNA20.6-201ENST00000517251 CRYBG1Q9Y4K1 1723 aa4.43□□□□□ -1.7
SCARNA20.6-201ENST00000517251 LTN1O94822 1766 aa4.43□□□□□ -1.7
SCARNA20.6-201ENST00000517251 MSH5O43196 834 aa4.43□□□□□ -1.7
SCARNA20.6-201ENST00000517251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.43□□□□□ -1.7
SCARNA20.6-201ENST00000517251 CACNA1FO60840 1977 aa4.43□□□□□ -1.7
SCARNA20.6-201ENST00000517251 FANCIQ9NVI1 1328 aa4.43□□□□□ -1.7
SCARNA20.6-201ENST00000517251 ATP7BP35670 1465 aa4.43□□□□□ -1.7
SCARNA20.6-201ENST00000517251 PHRF1Q9P1Y6 1649 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms