RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 PRR20AP86496 221 aa3.7□□□□□ -1.82
RNU6-1258P-201ENST00000516911 BLOC1S3Q6QNY0 202 aa3.7□□□□□ -1.82
RNU6-1258P-201ENST00000516911 PADI6Q6TGC4 694 aa3.7□□□□□ -1.82
RNU6-1258P-201ENST00000516911 SPRYD3Q8NCJ5 442 aa3.7□□□□□ -1.82
RNU6-1258P-201ENST00000516911 RBM46Q8TBY0 533 aaKnown RBP3.7□□□□□ -1.82
RNU6-1258P-201ENST00000516911 BBXQ8WY36 941 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1258P-201ENST00000516911 PPEF1O14829 653 aaPredicted RBP3.69□□□□□ -1.82
RNU6-1258P-201ENST00000516911 FOXC1Q12948 553 aa3.69□□□□□ -1.82
RNU6-1258P-201ENST00000516911 TREML4Q6UXN2 200 aa3.69□□□□□ -1.82
RNU6-1258P-201ENST00000516911 SLC6A16Q9GZN6 736 aa3.69□□□□□ -1.82
RNU6-1258P-201ENST00000516911 CDHR5Q9HBB8 845 aa3.69□□□□□ -1.82
RNU6-1258P-201ENST00000516911 C11orf95C9JLR9 678 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1258P-201ENST00000516911 CD2BP2O95400 341 aaKnown RBP3.68□□□□□ -1.82
RNU6-1258P-201ENST00000516911 S1PR4O95977 384 aa3.68□□□□□ -1.82
RNU6-1258P-201ENST00000516911 OSBPP22059 807 aa3.68□□□□□ -1.82
RNU6-1258P-201ENST00000516911 DNAJB2P25686 324 aa3.68□□□□□ -1.82
RNU6-1258P-201ENST00000516911 INSM1Q01101 510 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1258P-201ENST00000516911 C3orf80F5H4A9 247 aa3.67□□□□□ -1.82
RNU6-1258P-201ENST00000516911 AXIN1O15169 862 aa3.67□□□□□ -1.82
RNU6-1258P-201ENST00000516911 ZBTB24O43167 697 aaPredicted RBP3.67□□□□□ -1.82
RNU6-1258P-201ENST00000516911 ACTN4O43707 911 aaKnown RBP3.67□□□□□ -1.82
RNU6-1258P-201ENST00000516911 WFS1O76024 890 aa3.67□□□□□ -1.82
RNU6-1258P-201ENST00000516911 LIAT1Q6ZQX7 453 aa3.67□□□□□ -1.82
RNU6-1258P-201ENST00000516911 CYP4X1Q8N118 509 aa3.67□□□□□ -1.82
RNU6-1258P-201ENST00000516911 TTC24A2A3L6 582 aaPredicted RBP3.66□□□□□ -1.82
RNU6-1258P-201ENST00000516911 FAM181BA6NEQ2 426 aa3.66□□□□□ -1.82
RNU6-1258P-201ENST00000516911 POTECB2RU33 542 aa3.66□□□□□ -1.82
RNU6-1258P-201ENST00000516911 ADH1BP00325 375 aa3.66□□□□□ -1.82
RNU6-1258P-201ENST00000516911 CFHP08603 1231 aa3.66□□□□□ -1.82
RNU6-1258P-201ENST00000516911 LMOD2Q6P5Q4 547 aa3.66□□□□□ -1.82
RNU6-1258P-201ENST00000516911 TRIM67Q6ZTA4 783 aa3.66□□□□□ -1.82
RNU6-1258P-201ENST00000516911 CFAP44Q96MT7 982 aa3.66□□□□□ -1.82
RNU6-1258P-201ENST00000516911 EYA1Q99502 592 aa3.66□□□□□ -1.82
RNU6-1258P-201ENST00000516911 AAASQ9NRG9 546 aa3.66□□□□□ -1.82
RNU6-1258P-201ENST00000516911 STK17AQ9UEE5 414 aa3.66□□□□□ -1.82
RNU6-1258P-201ENST00000516911 ST8SIA5O15466 376 aa3.65□□□□□ -1.83
RNU6-1258P-201ENST00000516911 TLL1O43897 1013 aa3.65□□□□□ -1.83
RNU6-1258P-201ENST00000516911 GDF9O60383 454 aa3.65□□□□□ -1.83
RNU6-1258P-201ENST00000516911 PRIM1P49642 420 aaKnown RBP3.65□□□□□ -1.83
RNU6-1258P-201ENST00000516911 ARIH1Q9Y4X5 557 aaPredicted RBP3.65□□□□□ -1.83
RNU6-1258P-201ENST00000516911 NUTM2FA1L443 756 aa3.64□□□□□ -1.83
RNU6-1258P-201ENST00000516911 CTC1Q2NKJ3 1217 aa3.64□□□□□ -1.83
RNU6-1258P-201ENST00000516911 TTC13Q8NBP0 860 aa3.64□□□□□ -1.83
RNU6-1258P-201ENST00000516911 SPSB2Q99619 263 aa3.64□□□□□ -1.83
RNU6-1258P-201ENST00000516911 RCCD1A6NED2 376 aa3.63□□□□□ -1.83
RNU6-1258P-201ENST00000516911 RPIAP49247 311 aa3.63□□□□□ -1.83
RNU6-1258P-201ENST00000516911 PAXIP1Q6ZW49 1069 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1258P-201ENST00000516911 SCUBE3Q8IX30 993 aa3.63□□□□□ -1.83
RNU6-1258P-201ENST00000516911 TMEM134Q9H6X4 195 aa3.63□□□□□ -1.83
RNU6-1258P-201ENST00000516911 NPDC1Q9NQX5 325 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1258P-201ENST00000516911 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.62□□□□□ -1.83
RNU6-1258P-201ENST00000516911 OATP04181 439 aa3.62□□□□□ -1.83
RNU6-1258P-201ENST00000516911 SLC16A10Q8TF71 515 aa3.62□□□□□ -1.83
RNU6-1258P-201ENST00000516911 SENP2Q9HC62 589 aa3.62□□□□□ -1.83
RNU6-1258P-201ENST00000516911 GMPR2Q9P2T1 348 aaKnown RBP3.62□□□□□ -1.83
RNU6-1258P-201ENST00000516911 FMNL1O95466 1100 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1258P-201ENST00000516911 PUS10Q3MIT2 529 aaKnown RBP3.61□□□□□ -1.83
RNU6-1258P-201ENST00000516911 RDH13Q8NBN7 331 aa3.61□□□□□ -1.83
RNU6-1258P-201ENST00000516911 FCHSD2O94868 740 aa3.6□□□□□ -1.83
RNU6-1258P-201ENST00000516911 PTGDRQ13258 359 aa3.6□□□□□ -1.83
RNU6-1258P-201ENST00000516911 GRIPAP1Q4V328 841 aa3.6□□□□□ -1.83
RNU6-1258P-201ENST00000516911 CRIPAKQ8N1N5 446 aa3.6□□□□□ -1.83
RNU6-1258P-201ENST00000516911 EMID1Q96A84 441 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1258P-201ENST00000516911 KIFC2Q96AC6 838 aa3.6□□□□□ -1.83
RNU6-1258P-201ENST00000516911 PKD2L1Q9P0L9 805 aa3.6□□□□□ -1.83
RNU6-1258P-201ENST00000516911 FCF1Q9Y324 198 aaKnown RBP3.6□□□□□ -1.83
RNU6-1258P-201ENST00000516911 ADGRG1Q9Y653 693 aa3.6□□□□□ -1.83
RNU6-1258P-201ENST00000516911 AVPP01185 164 aa3.59□□□□□ -1.83
RNU6-1258P-201ENST00000516911 SLC10A3P09131 477 aa3.59□□□□□ -1.83
RNU6-1258P-201ENST00000516911 ARHGEF1Q92888 912 aaKnown RBP3.59□□□□□ -1.83
RNU6-1258P-201ENST00000516911 DACH1Q9UI36 760 aa3.59□□□□□ -1.83
RNU6-1258P-201ENST00000516911 TERTO14746 1132 aaKnown RBP3.58□□□□□ -1.84
RNU6-1258P-201ENST00000516911 WIPF1O43516 503 aa3.58□□□□□ -1.84
RNU6-1258P-201ENST00000516911 ATP6V1AP38606 617 aa3.58□□□□□ -1.84
RNU6-1258P-201ENST00000516911 SMCPP49901 116 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1258P-201ENST00000516911 FAM161AQ3B820 660 aa3.58□□□□□ -1.84
RNU6-1258P-201ENST00000516911 PLA2G2CQ5R387 149 aa3.58□□□□□ -1.84
RNU6-1258P-201ENST00000516911 SNIP1Q8TAD8 396 aaKnown RBP3.58□□□□□ -1.84
RNU6-1258P-201ENST00000516911 TOR4AQ9NXH8 423 aa3.58□□□□□ -1.84
RNU6-1258P-201ENST00000516911 FECHP22830 423 aa3.57□□□□□ -1.84
RNU6-1258P-201ENST00000516911 MLLT3P42568 568 aaPredicted RBP3.57□□□□□ -1.84
RNU6-1258P-201ENST00000516911 NFX1Q12986 1120 aaKnown RBP3.57□□□□□ -1.84
RNU6-1258P-201ENST00000516911 SULF1Q8IWU6 871 aa3.57□□□□□ -1.84
RNU6-1258P-201ENST00000516911 REPIN1Q9BWE0 567 aaKnown RBP3.57□□□□□ -1.84
RNU6-1258P-201ENST00000516911 ATP13A2Q9NQ11 1180 aa3.57□□□□□ -1.84
RNU6-1258P-201ENST00000516911 DDX11L8A8MPP1 907 aa3.56□□□□□ -1.84
RNU6-1258P-201ENST00000516911 LCE2AQ5TA79 106 aaPredicted RBP3.56□□□□□ -1.84
RNU6-1258P-201ENST00000516911 SMYD5Q6GMV2 418 aa3.56□□□□□ -1.84
RNU6-1258P-201ENST00000516911 CCDC24Q8N4L8 307 aa3.56□□□□□ -1.84
RNU6-1258P-201ENST00000516911 DAXXQ9UER7 740 aaPredicted RBP3.56□□□□□ -1.84
RNU6-1258P-201ENST00000516911 WNT7AO00755 349 aa3.55□□□□□ -1.84
RNU6-1258P-201ENST00000516911 Q3C1V9 767 aa3.55□□□□□ -1.84
RNU6-1258P-201ENST00000516911 PXYLP1Q8TE99 480 aa3.55□□□□□ -1.84
RNU6-1258P-201ENST00000516911 TRIM47Q96LD4 638 aa3.55□□□□□ -1.84
RNU6-1258P-201ENST00000516911 SNRPBP14678 240 aaKnown RBP3.54□□□□□ -1.84
RNU6-1258P-201ENST00000516911 FUT2Q10981 343 aa3.54□□□□□ -1.84
RNU6-1258P-201ENST00000516911 HIC1Q14526 733 aa3.54□□□□□ -1.84
RNU6-1258P-201ENST00000516911 MORN1Q5T089 497 aa3.54□□□□□ -1.84
RNU6-1258P-201ENST00000516911 P3H3Q8IVL6 736 aa3.54□□□□□ -1.84
RNU6-1258P-201ENST00000516911 ZSCAN1Q8NBB4 408 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms