RNA–Protein interactions for RNA: ENST00000516460.1

RNU4ATAC12P-201, Transcript of RNA, U4atac small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4ATAC12P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC12P-201ENST00000516460 RPGRIP1LQ68CZ1 1315 aa12.95□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 ARHGEF40Q8TER5 1519 aa12.95□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 SYNMO15061 1565 aa12.94□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 PREX1Q8TCU6 1659 aa12.93□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 POLR3GLQ9BT43 218 aa12.93□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 GTF3C3Q9Y5Q9 886 aa12.93□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 SETBP1Q9Y6X0 1596 aa12.93□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 SLC24A1O60721 1099 aa12.92□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 TMF1P82094 1093 aa12.92□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 TESK2Q96S53 571 aa12.92□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 SLC52A1Q9NWF4 448 aa12.9□□□□□ -0.34
RNU4ATAC12P-201ENST00000516460 MYO3AQ8NEV4 1616 aa12.89□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 CHGAP10645 457 aaKnown RBP12.88□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 ADGRF5Q8IZF2 1346 aa12.88□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 DISP3Q9P2K9 1392 aa12.87□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 NEXMIFQ5QGS0 1516 aa12.87□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 ZFYVE9O95405 1425 aa12.87□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 CLTCQ00610 1675 aaKnown RBP12.86□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 ERVK-7P63135 1459 aa12.86□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 RALBP1Q15311 655 aa12.86□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 MRS2Q9HD23 443 aa12.86□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 KDM5AP29375 1690 aaKnown RBP12.86□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 TMEM131LA2VDJ0 1609 aa12.85□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 SBNO2Q9Y2G9 1366 aa12.85□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 MYO5BQ9ULV0 1848 aa12.85□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 VGFO15240 615 aaPredicted RBP12.84□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 CFAP70Q5T0N1 1121 aa12.84□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 C14orf93Q9H972 538 aaKnown RBP12.84□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 SPATA31D1Q6ZQQ2 1576 aa12.84□□□□□ -0.35
RNU4ATAC12P-201ENST00000516460 ADGRB1O14514 1584 aa12.82□□□□□ -0.36
RNU4ATAC12P-201ENST00000516460 IDI1Q13907 227 aa12.82□□□□□ -0.36
RNU4ATAC12P-201ENST00000516460 BRD4O60885 1362 aaPredicted RBP12.81□□□□□ -0.36
RNU4ATAC12P-201ENST00000516460 MYBBP1AQ9BQG0 1328 aaKnown RBP12.81□□□□□ -0.36
RNU4ATAC12P-201ENST00000516460 PARD3Q8TEW0 1356 aa12.81□□□□□ -0.36
RNU4ATAC12P-201ENST00000516460 MYOM1P52179 1685 aa12.8□□□□□ -0.36
RNU4ATAC12P-201ENST00000516460 QRICH2Q9H0J4 1663 aa12.8□□□□□ -0.36
RNU4ATAC12P-201ENST00000516460 PER1O15534 1290 aaPredicted RBP12.79□□□□□ -0.36
RNU4ATAC12P-201ENST00000516460 HNRNPUQ00839 825 aaKnown RBP eCLIP12.79□□□□□ -0.36
RNU4ATAC12P-201ENST00000516460 CCDC184Q52MB2 194 aa12.79□□□□□ -0.36
RNU4ATAC12P-201ENST00000516460 PANK3Q9H999 370 aa12.78□□□□□ -0.36
RNU4ATAC12P-201ENST00000516460 CENPJQ9HC77 1338 aaPredicted RBP12.78□□□□□ -0.36
RNU4ATAC12P-201ENST00000516460 ARHGEF28Q8N1W1 1705 aaKnown RBP12.77□□□□□ -0.36
RNU4ATAC12P-201ENST00000516460 ESF1Q9H501 851 aaKnown RBP12.77□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 NLRP13Q86W25 1043 aa12.76□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 FAM9BQ8IZU0 186 aa12.76□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 NPC1L1Q9UHC9 1359 aa12.76□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 FBXO31Q5XUX0 539 aaPredicted RBP12.75□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 ZBED9Q6R2W3 1325 aa12.75□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 TMC1Q8TDI8 760 aa12.75□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 ASXL1Q8IXJ9 1541 aa12.74□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 A2ML1A8K2U0 1454 aa12.74□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 PUS7Q96PZ0 661 aaKnown RBP12.74□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 ZMYM3Q14202 1370 aa12.73□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 MLECQ14165 292 aa12.73□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 KNSTRNQ9Y448 316 aa12.73□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 INSRP06213 1382 aa12.72□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 LRPPRCP42704 1394 aaKnown RBP12.72□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 PNISRQ8TF01 805 aaKnown RBP12.72□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 TRAK1Q9UPV9 953 aa12.72□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 ALKQ9UM73 1620 aa12.71□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 CNGB1Q14028 1251 aaPredicted RBP12.71□□□□□ -0.37
RNU4ATAC12P-201ENST00000516460 RIMS2Q9UQ26 1411 aa12.71□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 TMEM132EQ6IEE7 984 aa12.7□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 TNRQ92752 1358 aa12.69□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 NEFLP07196 543 aa12.69□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.69□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 DLC1Q96QB1 1528 aa12.68□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 EVC2Q86UK5 1308 aa12.68□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 HDGFP51858 240 aaKnown RBP12.68□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 AMER1Q5JTC6 1135 aaPredicted RBP12.68□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 CC2D1BQ5T0F9 858 aaKnown RBP12.68□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 NUTM2DQ5VT03 806 aaPredicted RBP12.68□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 USP32Q8NFA0 1604 aa12.68□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 YTHDC2Q9H6S0 1430 aaKnown RBP12.68□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 SETD1AO15047 1707 aaKnown RBP12.68□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 TULP4Q9NRJ4 1543 aa12.67□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 PTPRMP28827 1452 aa12.66□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 NLRP1Q9C000 1473 aa12.66□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 UBR1Q8IWV7 1749 aa12.66□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 FER1L4A9Z1Z3 1794 aa12.66□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 SUPT16HQ9Y5B9 1047 aaKnown RBP12.65□□□□□ -0.38
RNU4ATAC12P-201ENST00000516460 NRXN3Q9Y4C0 1643 aa12.63□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 KNDC1Q76NI1 1749 aa12.63□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 TRHP20396 242 aaPredicted RBP12.63□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 C3P01024 1663 aa12.63□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 SMG6Q86US8 1419 aaKnown RBP12.62□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 ATAD2Q6PL18 1390 aa12.62□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 PPP2R1AP30153 589 aa12.62□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 BLMP54132 1417 aaPredicted RBP12.62□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 ANKRD36BQ8N2N9 1353 aa12.61□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 ABCC11Q96J66 1382 aa12.61□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 TMEM2Q9UHN6 1383 aa12.61□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 POGKQ9P215 609 aa12.61□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 NSD2O96028 1365 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms