RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 PLA2G2EQ9NZK7 142 aa7.99□□□□□ -1.13
SNORA40.12-201ENST00000516329 SLC4A3P48751 1232 aa7.98□□□□□ -1.13
SNORA40.12-201ENST00000516329 ZC3H15Q8WU90 426 aaKnown RBP7.98□□□□□ -1.13
SNORA40.12-201ENST00000516329 PHOX2BQ99453 314 aa7.98□□□□□ -1.13
SNORA40.12-201ENST00000516329 CCDC102AQ96A19 550 aa7.97□□□□□ -1.13
SNORA40.12-201ENST00000516329 IRF6O14896 467 aa7.96□□□□□ -1.14
SNORA40.12-201ENST00000516329 NYAP1Q6ZVC0 841 aa7.95□□□□□ -1.14
SNORA40.12-201ENST00000516329 KRI1Q8N9T8 703 aaKnown RBP7.95□□□□□ -1.14
SNORA40.12-201ENST00000516329 MINK1Q8N4C8 1332 aaPredicted RBP7.95□□□□□ -1.14
SNORA40.12-201ENST00000516329 ZMYND10O75800 440 aa7.94□□□□□ -1.14
SNORA40.12-201ENST00000516329 APLP1P51693 650 aa7.94□□□□□ -1.14
SNORA40.12-201ENST00000516329 BARGINQ6ZT62 677 aa7.93□□□□□ -1.14
SNORA40.12-201ENST00000516329 CFHP08603 1231 aa7.92□□□□□ -1.14
SNORA40.12-201ENST00000516329 NECTIN2Q92692 538 aa7.92□□□□□ -1.14
SNORA40.12-201ENST00000516329 DAXXQ9UER7 740 aaPredicted RBP7.92□□□□□ -1.14
SNORA40.12-201ENST00000516329 DDX11L8A8MPP1 907 aa7.91□□□□□ -1.14
SNORA40.12-201ENST00000516329 SLC10A3P09131 477 aa7.91□□□□□ -1.14
SNORA40.12-201ENST00000516329 MDM2Q00987 491 aaPredicted RBP7.91□□□□□ -1.14
SNORA40.12-201ENST00000516329 RDH13Q8NBN7 331 aa7.91□□□□□ -1.14
SNORA40.12-201ENST00000516329 COPS2P61201 443 aa7.89□□□□□ -1.15
SNORA40.12-201ENST00000516329 MTRQ99707 1265 aa7.89□□□□□ -1.15
SNORA40.12-201ENST00000516329 ITGBL1O95965 494 aaPredicted RBP7.88□□□□□ -1.15
SNORA40.12-201ENST00000516329 KMT5BQ4FZB7 885 aa7.88□□□□□ -1.15
SNORA40.12-201ENST00000516329 KCNC4Q03721 635 aa7.87□□□□□ -1.15
SNORA40.12-201ENST00000516329 PRR14Q9BWN1 585 aa7.87□□□□□ -1.15
SNORA40.12-201ENST00000516329 PCDHB3Q9Y5E6 796 aa7.87□□□□□ -1.15
SNORA40.12-201ENST00000516329 TJAP1Q5JTD0 557 aa7.86□□□□□ -1.15
SNORA40.12-201ENST00000516329 RSPH4AQ5TD94 716 aa7.86□□□□□ -1.15
SNORA40.12-201ENST00000516329 SULF1Q8IWU6 871 aa7.86□□□□□ -1.15
SNORA40.12-201ENST00000516329 ACTN4O43707 911 aaKnown RBP7.85□□□□□ -1.15
SNORA40.12-201ENST00000516329 BLOC1S3Q6QNY0 202 aa7.85□□□□□ -1.15
SNORA40.12-201ENST00000516329 ZNF516Q92618 1163 aa7.85□□□□□ -1.15
SNORA40.12-201ENST00000516329 IL21Q9HBE4 155 aa7.85□□□□□ -1.15
SNORA40.12-201ENST00000516329 CLCN1P35523 988 aa7.84□□□□□ -1.15
SNORA40.12-201ENST00000516329 TTLL12Q14166 644 aaPredicted RBP7.84□□□□□ -1.15
SNORA40.12-201ENST00000516329 SLC24A3Q9HC58 644 aa7.84□□□□□ -1.15
SNORA40.12-201ENST00000516329 GPCPD1Q9NPB8 672 aa7.84□□□□□ -1.15
SNORA40.12-201ENST00000516329 PUS10Q3MIT2 529 aaKnown RBP7.83□□□□□ -1.16
SNORA40.12-201ENST00000516329 REPIN1Q9BWE0 567 aaKnown RBP7.83□□□□□ -1.16
SNORA40.12-201ENST00000516329 A0A0G2JS52 829 aa7.82□□□□□ -1.16
SNORA40.12-201ENST00000516329 FUT2Q10981 343 aa7.82□□□□□ -1.16
SNORA40.12-201ENST00000516329 IFFO2Q5TF58 517 aa7.82□□□□□ -1.16
SNORA40.12-201ENST00000516329 AK7Q96M32 723 aa7.82□□□□□ -1.16
SNORA40.12-201ENST00000516329 TRIM66O15016 1216 aa7.81□□□□□ -1.16
SNORA40.12-201ENST00000516329 TLL1O43897 1013 aa7.81□□□□□ -1.16
SNORA40.12-201ENST00000516329 CD46P15529 392 aa7.81□□□□□ -1.16
SNORA40.12-201ENST00000516329 GCGRP47871 477 aa7.81□□□□□ -1.16
SNORA40.12-201ENST00000516329 AMHR2Q16671 573 aa7.81□□□□□ -1.16
SNORA40.12-201ENST00000516329 NKX2-3Q8TAU0 364 aa7.81□□□□□ -1.16
SNORA40.12-201ENST00000516329 FAM217BQ9NTX9 383 aaPredicted RBP7.81□□□□□ -1.16
SNORA40.12-201ENST00000516329 ZPR1O75312 459 aa7.8□□□□□ -1.16
SNORA40.12-201ENST00000516329 TMUB1Q9BVT8 246 aa7.8□□□□□ -1.16
SNORA40.12-201ENST00000516329 GIGYF2Q6Y7W6 1299 aaKnown RBP7.79□□□□□ -1.16
SNORA40.12-201ENST00000516329 PARP9Q8IXQ6 854 aa7.79□□□□□ -1.16
SNORA40.12-201ENST00000516329 NR1I2O75469 434 aa7.78□□□□□ -1.16
SNORA40.12-201ENST00000516329 SSTR3P32745 418 aaPredicted RBP7.77□□□□□ -1.17
SNORA40.12-201ENST00000516329 PDE4DQ08499 809 aa7.77□□□□□ -1.17
SNORA40.12-201ENST00000516329 KDM4AO75164 1064 aa7.76□□□□□ -1.17
SNORA40.12-201ENST00000516329 ATP6V1AP38606 617 aa7.76□□□□□ -1.17
SNORA40.12-201ENST00000516329 MORN1Q5T089 497 aa7.76□□□□□ -1.17
SNORA40.12-201ENST00000516329 SLC27A5Q9Y2P5 690 aa7.75□□□□□ -1.17
SNORA40.12-201ENST00000516329 PPP1R18Q6NYC8 613 aa7.74□□□□□ -1.17
SNORA40.12-201ENST00000516329 SCUBE3Q8IX30 993 aa7.74□□□□□ -1.17
SNORA40.12-201ENST00000516329 HLA-CQ95604 372 aa7.74□□□□□ -1.17
SNORA40.12-201ENST00000516329 ADH1BP00325 375 aa7.73□□□□□ -1.17
SNORA40.12-201ENST00000516329 MS4A1P11836 297 aa7.73□□□□□ -1.17
SNORA40.12-201ENST00000516329 GUCA2AQ02747 115 aa7.73□□□□□ -1.17
SNORA40.12-201ENST00000516329 GRIPAP1Q4V328 841 aa7.73□□□□□ -1.17
SNORA40.12-201ENST00000516329 NUTM1Q86Y26 1132 aa7.73□□□□□ -1.17
SNORA40.12-201ENST00000516329 HOXA2O43364 376 aa7.72□□□□□ -1.17
SNORA40.12-201ENST00000516329 TPRNQ4KMQ1 711 aa7.72□□□□□ -1.17
SNORA40.12-201ENST00000516329 BEGAINQ9BUH8 593 aa7.72□□□□□ -1.17
SNORA40.12-201ENST00000516329 S1PR4O95977 384 aa7.71□□□□□ -1.18
SNORA40.12-201ENST00000516329 USP46P62068 366 aa7.71□□□□□ -1.18
SNORA40.12-201ENST00000516329 SPSB2Q99619 263 aa7.71□□□□□ -1.18
SNORA40.12-201ENST00000516329 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.71□□□□□ -1.18
SNORA40.12-201ENST00000516329 GGCXP38435 758 aa7.7□□□□□ -1.18
SNORA40.12-201ENST00000516329 RNF19BQ6ZMZ0 732 aa7.7□□□□□ -1.18
SNORA40.12-201ENST00000516329 SPIRE2Q8WWL2 714 aa7.7□□□□□ -1.18
SNORA40.12-201ENST00000516329 PPEF1O14829 653 aaPredicted RBP7.69□□□□□ -1.18
SNORA40.12-201ENST00000516329 FMNL1O95466 1100 aaPredicted RBP7.69□□□□□ -1.18
SNORA40.12-201ENST00000516329 THAP11Q96EK4 314 aa7.69□□□□□ -1.18
SNORA40.12-201ENST00000516329 SLC6A16Q9GZN6 736 aa7.69□□□□□ -1.18
SNORA40.12-201ENST00000516329 GPBP1L1Q9HC44 474 aaPredicted RBP7.69□□□□□ -1.18
SNORA40.12-201ENST00000516329 PRDM9Q9NQV7 894 aa7.68□□□□□ -1.18
SNORA40.12-201ENST00000516329 RNF223E7ERA6 249 aa7.67□□□□□ -1.18
SNORA40.12-201ENST00000516329 NDUFV2P19404 249 aa7.67□□□□□ -1.18
SNORA40.12-201ENST00000516329 Q3C1V9 767 aa7.67□□□□□ -1.18
SNORA40.12-201ENST00000516329 BRICD5Q6PL45 260 aa7.67□□□□□ -1.18
SNORA40.12-201ENST00000516329 TBC1D2Q9BYX2 928 aa7.67□□□□□ -1.18
SNORA40.12-201ENST00000516329 MOXD2PA6NHM9 499 aa7.66□□□□□ -1.18
SNORA40.12-201ENST00000516329 FDX1P10109 184 aa7.66□□□□□ -1.18
SNORA40.12-201ENST00000516329 RGS20O76081 388 aa7.65□□□□□ -1.18
SNORA40.12-201ENST00000516329 FAM160A2Q8N612 972 aaPredicted RBP7.65□□□□□ -1.18
SNORA40.12-201ENST00000516329 SYMPKQ92797 1274 aaKnown RBP7.65□□□□□ -1.18
SNORA40.12-201ENST00000516329 PRKD2Q9BZL6 878 aa7.65□□□□□ -1.18
SNORA40.12-201ENST00000516329 SALL2Q9Y467 1007 aaPredicted RBP7.65□□□□□ -1.18
SNORA40.12-201ENST00000516329 KDM4CQ9H3R0 1056 aa7.64□□□□□ -1.19
SNORA40.12-201ENST00000516329 PCDHGC3Q9UN70 934 aa7.64□□□□□ -1.19
SNORA40.12-201ENST00000516329 C6orf229H3BNL8 230 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms