RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 ARHGAP33O14559 1287 aa6.41□□□□□ -1.38
RNU6-390P-201ENST00000516259 PRPF38BQ5VTL8 546 aaKnown RBP6.41□□□□□ -1.38
RNU6-390P-201ENST00000516259 PROCA1Q8NCQ7 364 aaPredicted RBP6.41□□□□□ -1.38
RNU6-390P-201ENST00000516259 OTUD5Q96G74 571 aa6.41□□□□□ -1.38
RNU6-390P-201ENST00000516259 SUPT5HO00267 1087 aaKnown RBP6.4□□□□□ -1.38
RNU6-390P-201ENST00000516259 RSBN1LQ6PCB5 846 aaPredicted RBP6.4□□□□□ -1.38
RNU6-390P-201ENST00000516259 RIC3Q7Z5B4 369 aa6.4□□□□□ -1.38
RNU6-390P-201ENST00000516259 LAPTM4BQ86VI4 370 aa6.4□□□□□ -1.38
RNU6-390P-201ENST00000516259 NLRP7Q8WX94 980 aa6.4□□□□□ -1.38
RNU6-390P-201ENST00000516259 POLR3EQ9NVU0 708 aa6.4□□□□□ -1.38
RNU6-390P-201ENST00000516259 UBTFP17480 764 aaKnown RBP6.39□□□□□ -1.39
RNU6-390P-201ENST00000516259 RFC5P40937 340 aa6.39□□□□□ -1.39
RNU6-390P-201ENST00000516259 NUTM1Q86Y26 1132 aa6.39□□□□□ -1.39
RNU6-390P-201ENST00000516259 KCNK17Q96T54 332 aa6.39□□□□□ -1.39
RNU6-390P-201ENST00000516259 C3orf80F5H4A9 247 aa6.38□□□□□ -1.39
RNU6-390P-201ENST00000516259 APBB1O00213 710 aa6.38□□□□□ -1.39
RNU6-390P-201ENST00000516259 TRAK2O60296 914 aa6.38□□□□□ -1.39
RNU6-390P-201ENST00000516259 GCGRP47871 477 aa6.38□□□□□ -1.39
RNU6-390P-201ENST00000516259 KIAA1468Q9P260 1216 aa6.38□□□□□ -1.39
RNU6-390P-201ENST00000516259 DDX11L8A8MPP1 907 aa6.37□□□□□ -1.39
RNU6-390P-201ENST00000516259 TK2O00142 265 aa6.37□□□□□ -1.39
RNU6-390P-201ENST00000516259 LILRB3O75022 631 aa6.37□□□□□ -1.39
RNU6-390P-201ENST00000516259 KDM4AO75164 1064 aa6.37□□□□□ -1.39
RNU6-390P-201ENST00000516259 FAM98CQ17RN3 349 aaKnown RBP6.37□□□□□ -1.39
RNU6-390P-201ENST00000516259 PROX2Q3B8N5 592 aa6.37□□□□□ -1.39
RNU6-390P-201ENST00000516259 FNBP4Q8N3X1 1017 aaPredicted RBP6.37□□□□□ -1.39
RNU6-390P-201ENST00000516259 LIMD1Q9UGP4 676 aa6.37□□□□□ -1.39
RNU6-390P-201ENST00000516259 SLC4A3P48751 1232 aa6.36□□□□□ -1.39
RNU6-390P-201ENST00000516259 HDGFP51858 240 aaKnown RBP6.36□□□□□ -1.39
RNU6-390P-201ENST00000516259 ZNF687Q8N1G0 1237 aa6.36□□□□□ -1.39
RNU6-390P-201ENST00000516259 NECTIN2Q92692 538 aa6.36□□□□□ -1.39
RNU6-390P-201ENST00000516259 ERBB3P21860 1342 aa6.35□□□□□ -1.39
RNU6-390P-201ENST00000516259 RAD21O60216 631 aa6.35□□□□□ -1.39
RNU6-390P-201ENST00000516259 MOXD2PA6NHM9 499 aa6.34□□□□□ -1.39
RNU6-390P-201ENST00000516259 BHMG1C9JSJ3 638 aaPredicted RBP6.34□□□□□ -1.39
RNU6-390P-201ENST00000516259 PROSER2Q86WR7 435 aaPredicted RBP6.34□□□□□ -1.39
RNU6-390P-201ENST00000516259 SLF2Q8IX21 1173 aa6.34□□□□□ -1.39
RNU6-390P-201ENST00000516259 NBPF3Q9H094 633 aa6.34□□□□□ -1.39
RNU6-390P-201ENST00000516259 VPS9D1Q9Y2B5 631 aa6.34□□□□□ -1.39
RNU6-390P-201ENST00000516259 HOXA2O43364 376 aa6.33□□□□□ -1.4
RNU6-390P-201ENST00000516259 GRIPAP1Q4V328 841 aa6.33□□□□□ -1.4
RNU6-390P-201ENST00000516259 VARS2Q5ST30 1063 aaKnown RBP6.33□□□□□ -1.4
RNU6-390P-201ENST00000516259 LHX8Q68G74 356 aa6.33□□□□□ -1.4
RNU6-390P-201ENST00000516259 POTEEQ6S8J3 1075 aa6.33□□□□□ -1.4
RNU6-390P-201ENST00000516259 ZBTB3Q9H5J0 574 aa6.33□□□□□ -1.4
RNU6-390P-201ENST00000516259 PRM3Q9NNZ6 103 aa6.33□□□□□ -1.4
RNU6-390P-201ENST00000516259 SMAPO00193 183 aa6.32□□□□□ -1.4
RNU6-390P-201ENST00000516259 SLC10A3P09131 477 aa6.32□□□□□ -1.4
RNU6-390P-201ENST00000516259 PSEN2P49810 448 aa6.32□□□□□ -1.4
RNU6-390P-201ENST00000516259 SWT1Q5T5J6 900 aaKnown RBP6.32□□□□□ -1.4
RNU6-390P-201ENST00000516259 RDH13Q8NBN7 331 aa6.32□□□□□ -1.4
RNU6-390P-201ENST00000516259 CLUAP1Q96AJ1 413 aa6.32□□□□□ -1.4
RNU6-390P-201ENST00000516259 C1orf115Q9H7X2 142 aa6.32□□□□□ -1.4
RNU6-390P-201ENST00000516259 ST18O60284 1047 aa6.31□□□□□ -1.4
RNU6-390P-201ENST00000516259 ATP1B4Q9UN42 357 aaPredicted RBP6.31□□□□□ -1.4
RNU6-390P-201ENST00000516259 COG6Q9Y2V7 657 aa6.31□□□□□ -1.4
RNU6-390P-201ENST00000516259 FDX1P10109 184 aa6.3□□□□□ -1.4
RNU6-390P-201ENST00000516259 QPCTQ16769 361 aa6.3□□□□□ -1.4
RNU6-390P-201ENST00000516259 FBXO31Q5XUX0 539 aaPredicted RBP6.3□□□□□ -1.4
RNU6-390P-201ENST00000516259 WWC1Q8IX03 1113 aa6.3□□□□□ -1.4
RNU6-390P-201ENST00000516259 MTMR14Q8NCE2 650 aa6.3□□□□□ -1.4
RNU6-390P-201ENST00000516259 SNRKQ9NRH2 765 aa6.3□□□□□ -1.4
RNU6-390P-201ENST00000516259 NDUFV2P19404 249 aa6.29□□□□□ -1.4
RNU6-390P-201ENST00000516259 HRCP23327 699 aa6.29□□□□□ -1.4
RNU6-390P-201ENST00000516259 EMP3P54852 163 aa6.29□□□□□ -1.4
RNU6-390P-201ENST00000516259 DMRTA1Q5VZB9 504 aa6.29□□□□□ -1.4
RNU6-390P-201ENST00000516259 PRR14Q9BWN1 585 aa6.29□□□□□ -1.4
RNU6-390P-201ENST00000516259 PCDHB15Q9Y5E8 787 aa6.29□□□□□ -1.4
RNU6-390P-201ENST00000516259 ATP6V1AP38606 617 aa6.28□□□□□ -1.4
RNU6-390P-201ENST00000516259 MTMR2Q13614 643 aa6.28□□□□□ -1.4
RNU6-390P-201ENST00000516259 SERPINA10Q9UK55 444 aa6.28□□□□□ -1.4
RNU6-390P-201ENST00000516259 NUTM2BA6NNL0 878 aaPredicted RBP6.27□□□□□ -1.41
RNU6-390P-201ENST00000516259 NUTM2EB1AL46 878 aaPredicted RBP6.27□□□□□ -1.41
RNU6-390P-201ENST00000516259 KMT5BQ4FZB7 885 aa6.27□□□□□ -1.41
RNU6-390P-201ENST00000516259 RTL5Q5HYW3 569 aaPredicted RBP6.27□□□□□ -1.41
RNU6-390P-201ENST00000516259 NUTM2DQ5VT03 806 aaPredicted RBP6.27□□□□□ -1.41
RNU6-390P-201ENST00000516259 DESI1Q6ICB0 168 aa6.27□□□□□ -1.41
RNU6-390P-201ENST00000516259 NUTM2AQ8IVF1 878 aaPredicted RBP6.27□□□□□ -1.41
RNU6-390P-201ENST00000516259 SEPT9Q9UHD8 586 aaPredicted RBP6.27□□□□□ -1.41
RNU6-390P-201ENST00000516259 PCDHGC3Q9UN70 934 aa6.27□□□□□ -1.41
RNU6-390P-201ENST00000516259 SALL2Q9Y467 1007 aaPredicted RBP6.27□□□□□ -1.41
RNU6-390P-201ENST00000516259 USP17L8P0C7I0 530 aa6.26□□□□□ -1.41
RNU6-390P-201ENST00000516259 SAMD7Q7Z3H4 446 aa6.26□□□□□ -1.41
RNU6-390P-201ENST00000516259 HELBQ8NG08 1087 aaPredicted RBP6.26□□□□□ -1.41
RNU6-390P-201ENST00000516259 POM121Q96HA1 1249 aa6.26□□□□□ -1.41
RNU6-390P-201ENST00000516259 ZFRQ96KR1 1074 aaKnown RBP6.26□□□□□ -1.41
RNU6-390P-201ENST00000516259 PLSCR2Q9NRY7 297 aa6.26□□□□□ -1.41
RNU6-390P-201ENST00000516259 HRO43593 1189 aa6.25□□□□□ -1.41
RNU6-390P-201ENST00000516259 ACTN4O43707 911 aaKnown RBP6.25□□□□□ -1.41
RNU6-390P-201ENST00000516259 AP1G2O75843 785 aa6.25□□□□□ -1.41
RNU6-390P-201ENST00000516259 Q3C1V9 767 aa6.25□□□□□ -1.41
RNU6-390P-201ENST00000516259 MRPL50Q8N5N7 158 aaKnown RBP6.25□□□□□ -1.41
RNU6-390P-201ENST00000516259 GJD4Q96KN9 370 aaPredicted RBP6.25□□□□□ -1.41
RNU6-390P-201ENST00000516259 AXIN2Q9Y2T1 843 aa6.25□□□□□ -1.41
RNU6-390P-201ENST00000516259 CFHP08603 1231 aa6.24□□□□□ -1.41
RNU6-390P-201ENST00000516259 LSM11P83369 360 aaKnown RBP eCLIP6.24□□□□□ -1.41
RNU6-390P-201ENST00000516259 FUT2Q10981 343 aa6.24□□□□□ -1.41
RNU6-390P-201ENST00000516259 WASHC4Q2M389 1173 aa6.24□□□□□ -1.41
RNU6-390P-201ENST00000516259 CABLES1Q8TDN4 633 aa6.24□□□□□ -1.41
RNU6-390P-201ENST00000516259 ZNF330Q9Y3S2 320 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms