RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 ZSCAN1Q8NBB4 408 aa4.3□□□□□ -1.72
SCARNA23-201ENST00000516060 S1PR4O95977 384 aa4.29□□□□□ -1.72
SCARNA23-201ENST00000516060 PRSS12P56730 875 aa4.29□□□□□ -1.72
SCARNA23-201ENST00000516060 EN1Q05925 392 aaPredicted RBP4.29□□□□□ -1.72
SCARNA23-201ENST00000516060 FOXC1Q12948 553 aa4.29□□□□□ -1.72
SCARNA23-201ENST00000516060 LMOD2Q6P5Q4 547 aa4.29□□□□□ -1.72
SCARNA23-201ENST00000516060 NECTIN2Q92692 538 aa4.29□□□□□ -1.72
SCARNA23-201ENST00000516060 TOR4AQ9NXH8 423 aa4.29□□□□□ -1.72
SCARNA23-201ENST00000516060 PNMA3Q9UL41 463 aa4.29□□□□□ -1.72
SCARNA23-201ENST00000516060 NBPF26B4DH59 902 aa4.28□□□□□ -1.72
SCARNA23-201ENST00000516060 TLL1O43897 1013 aa4.28□□□□□ -1.72
SCARNA23-201ENST00000516060 NKX1-1Q15270 411 aaPredicted RBP4.28□□□□□ -1.72
SCARNA23-201ENST00000516060 PLA2G2CQ5R387 149 aa4.28□□□□□ -1.72
SCARNA23-201ENST00000516060 BLOC1S3Q6QNY0 202 aa4.28□□□□□ -1.72
SCARNA23-201ENST00000516060 DDX12PQ92771 950 aa4.28□□□□□ -1.72
SCARNA23-201ENST00000516060 MAP3K7O43318 606 aa4.27□□□□□ -1.73
SCARNA23-201ENST00000516060 GMPRP36959 345 aa4.27□□□□□ -1.73
SCARNA23-201ENST00000516060 PCDHB3Q9Y5E6 796 aa4.27□□□□□ -1.73
SCARNA23-201ENST00000516060 SWT1Q5T5J6 900 aaKnown RBP4.26□□□□□ -1.73
SCARNA23-201ENST00000516060 NUDT18Q6ZVK8 323 aa4.26□□□□□ -1.73
SCARNA23-201ENST00000516060 SLF2Q8IX21 1173 aa4.26□□□□□ -1.73
SCARNA23-201ENST00000516060 KCTD17Q8N5Z5 321 aa4.26□□□□□ -1.73
SCARNA23-201ENST00000516060 TRIM47Q96LD4 638 aa4.26□□□□□ -1.73
SCARNA23-201ENST00000516060 ATP13A2Q9NQ11 1180 aa4.26□□□□□ -1.73
SCARNA23-201ENST00000516060 RYDENQ9NUL5 291 aaKnown RBP4.25□□□□□ -1.73
SCARNA23-201ENST00000516060 DPYSL4O14531 572 aa4.24□□□□□ -1.73
SCARNA23-201ENST00000516060 NBR1Q14596 966 aa4.24□□□□□ -1.73
SCARNA23-201ENST00000516060 CYP4X1Q8N118 509 aa4.24□□□□□ -1.73
SCARNA23-201ENST00000516060 CERKQ8TCT0 537 aa4.24□□□□□ -1.73
SCARNA23-201ENST00000516060 PRR14Q9BWN1 585 aa4.24□□□□□ -1.73
SCARNA23-201ENST00000516060 DNAJC5Q9H3Z4 198 aa4.24□□□□□ -1.73
SCARNA23-201ENST00000516060 SENP2Q9HC62 589 aa4.24□□□□□ -1.73
SCARNA23-201ENST00000516060 GSK3AP49840 483 aa4.23□□□□□ -1.73
SCARNA23-201ENST00000516060 SLC16A10Q8TF71 515 aa4.23□□□□□ -1.73
SCARNA23-201ENST00000516060 KCNMA1Q12791 1236 aa4.22□□□□□ -1.73
SCARNA23-201ENST00000516060 CAMK2BQ13554 666 aa4.22□□□□□ -1.73
SCARNA23-201ENST00000516060 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
SCARNA23-201ENST00000516060 ADH1BP00325 375 aa4.21□□□□□ -1.74
SCARNA23-201ENST00000516060 PRIM1P49642 420 aaKnown RBP4.21□□□□□ -1.74
SCARNA23-201ENST00000516060 XP32Q5T750 250 aa4.21□□□□□ -1.74
SCARNA23-201ENST00000516060 NXF1Q9UBU9 619 aaKnown RBP4.21□□□□□ -1.74
SCARNA23-201ENST00000516060 CHGAP10645 457 aaKnown RBP4.2□□□□□ -1.74
SCARNA23-201ENST00000516060 RPIAP49247 311 aa4.2□□□□□ -1.74
SCARNA23-201ENST00000516060 IRF7Q92985 503 aa4.2□□□□□ -1.74
SCARNA23-201ENST00000516060 KIFC2Q96AC6 838 aa4.2□□□□□ -1.74
SCARNA23-201ENST00000516060 SLC6A16Q9GZN6 736 aa4.2□□□□□ -1.74
SCARNA23-201ENST00000516060 SMPD1P17405 629 aa4.19□□□□□ -1.74
SCARNA23-201ENST00000516060 SLC4A3P48751 1232 aa4.19□□□□□ -1.74
SCARNA23-201ENST00000516060 RBM27Q9P2N5 1060 aaKnown RBP4.19□□□□□ -1.74
SCARNA23-201ENST00000516060 TTC24A2A3L6 582 aaPredicted RBP4.18□□□□□ -1.74
SCARNA23-201ENST00000516060 ACTN4O43707 911 aaKnown RBP4.18□□□□□ -1.74
SCARNA23-201ENST00000516060 CD2BP2O95400 341 aaKnown RBP4.18□□□□□ -1.74
SCARNA23-201ENST00000516060 NPAS3Q8IXF0 933 aa4.18□□□□□ -1.74
SCARNA23-201ENST00000516060 TTC13Q8NBP0 860 aa4.18□□□□□ -1.74
SCARNA23-201ENST00000516060 ERBB4Q15303 1308 aa4.18□□□□□ -1.74
SCARNA23-201ENST00000516060 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.17□□□□□ -1.74
SCARNA23-201ENST00000516060 H3BM21 787 aa4.17□□□□□ -1.74
SCARNA23-201ENST00000516060 TMEM151AQ8N4L1 468 aa4.17□□□□□ -1.74
SCARNA23-201ENST00000516060 VEGFBP49765 207 aa4.16□□□□□ -1.74
SCARNA23-201ENST00000516060 CADPS2Q86UW7 1296 aa4.16□□□□□ -1.74
SCARNA23-201ENST00000516060 EYA1Q99502 592 aa4.16□□□□□ -1.74
SCARNA23-201ENST00000516060 CDHR5Q9HBB8 845 aa4.16□□□□□ -1.74
SCARNA23-201ENST00000516060 GTPBP6O43824 516 aaPredicted RBP4.15□□□□□ -1.75
SCARNA23-201ENST00000516060 NR1I2O75469 434 aa4.15□□□□□ -1.75
SCARNA23-201ENST00000516060 GDF11O95390 407 aa4.15□□□□□ -1.75
SCARNA23-201ENST00000516060 PDIA6Q15084 440 aa4.15□□□□□ -1.75
SCARNA23-201ENST00000516060 SNIP1Q8TAD8 396 aaKnown RBP4.15□□□□□ -1.75
SCARNA23-201ENST00000516060 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.75
SCARNA23-201ENST00000516060 J3QL48 77 aa4.14□□□□□ -1.75
SCARNA23-201ENST00000516060 RASSF7Q02833 373 aa4.14□□□□□ -1.75
SCARNA23-201ENST00000516060 PADI6Q6TGC4 694 aa4.14□□□□□ -1.75
SCARNA23-201ENST00000516060 HPS1Q92902 700 aa4.14□□□□□ -1.75
SCARNA23-201ENST00000516060 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
SCARNA23-201ENST00000516060 WNT7AO00755 349 aa4.13□□□□□ -1.75
SCARNA23-201ENST00000516060 KMT5BQ4FZB7 885 aa4.13□□□□□ -1.75
SCARNA23-201ENST00000516060 SCUBE3Q8IX30 993 aa4.13□□□□□ -1.75
SCARNA23-201ENST00000516060 CFHP08603 1231 aa4.12□□□□□ -1.75
SCARNA23-201ENST00000516060 SPSB2Q99619 263 aa4.12□□□□□ -1.75
SCARNA23-201ENST00000516060 NPDC1Q9NQX5 325 aaPredicted RBP4.12□□□□□ -1.75
SCARNA23-201ENST00000516060 FCF1Q9Y324 198 aaKnown RBP4.12□□□□□ -1.75
SCARNA23-201ENST00000516060 SPDYE16A6NNV3 312 aaPredicted RBP4.11□□□□□ -1.75
SCARNA23-201ENST00000516060 GRXCR2A6NFK2 248 aa4.1□□□□□ -1.75
SCARNA23-201ENST00000516060 OSBPP22059 807 aa4.1□□□□□ -1.75
SCARNA23-201ENST00000516060 SLC10A3P09131 477 aa4.09□□□□□ -1.75
SCARNA23-201ENST00000516060 KRTAP1-3Q8IUG1 177 aa4.09□□□□□ -1.75
SCARNA23-201ENST00000516060 MRGPRX2Q96LB1 330 aa4.09□□□□□ -1.75
SCARNA23-201ENST00000516060 PSMG3-AS1Q96PY0 264 aa4.09□□□□□ -1.75
SCARNA23-201ENST00000516060 TMEM134Q9H6X4 195 aa4.09□□□□□ -1.75
SCARNA23-201ENST00000516060 VSIG8P0DPA2 414 aa4.08□□□□□ -1.76
SCARNA23-201ENST00000516060 DNAJB2P25686 324 aa4.08□□□□□ -1.76
SCARNA23-201ENST00000516060 GPAT2Q6NUI2 795 aa4.08□□□□□ -1.76
SCARNA23-201ENST00000516060 TRIM46Q7Z4K8 759 aa4.08□□□□□ -1.76
SCARNA23-201ENST00000516060 IGHA1P01876 353 aa4.07□□□□□ -1.76
SCARNA23-201ENST00000516060 BMP1P13497 986 aa4.07□□□□□ -1.76
SCARNA23-201ENST00000516060 PUS10Q3MIT2 529 aaKnown RBP4.07□□□□□ -1.76
SCARNA23-201ENST00000516060 FAM160A2Q8N612 972 aaPredicted RBP4.07□□□□□ -1.76
SCARNA23-201ENST00000516060 ZBTB24O43167 697 aaPredicted RBP4.06□□□□□ -1.76
SCARNA23-201ENST00000516060 THAP11Q96EK4 314 aa4.06□□□□□ -1.76
SCARNA23-201ENST00000516060 RNF225M0QZC1 329 aaPredicted RBP4.05□□□□□ -1.76
SCARNA23-201ENST00000516060 TRIM32Q13049 653 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms