RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 GPRASP1Q5JY77 1395 aa10.73□□□□□ -0.69
SCARNA20.1-201ENST00000516009 C3P01024 1663 aa10.72□□□□□ -0.69
SCARNA20.1-201ENST00000516009 IQGAP1P46940 1657 aa10.71□□□□□ -0.69
SCARNA20.1-201ENST00000516009 NEXMIFQ5QGS0 1516 aa10.71□□□□□ -0.69
SCARNA20.1-201ENST00000516009 NRXN1Q9ULB1 1477 aa10.71□□□□□ -0.69
SCARNA20.1-201ENST00000516009 NBPF1Q3BBV0 1214 aa10.7□□□□□ -0.7
SCARNA20.1-201ENST00000516009 ADGRF5Q8IZF2 1346 aa10.69□□□□□ -0.7
SCARNA20.1-201ENST00000516009 DDX10Q13206 875 aaKnown RBP10.69□□□□□ -0.7
SCARNA20.1-201ENST00000516009 KDM5AP29375 1690 aaKnown RBP10.69□□□□□ -0.7
SCARNA20.1-201ENST00000516009 TNRQ92752 1358 aa10.68□□□□□ -0.7
SCARNA20.1-201ENST00000516009 STAG3Q9UJ98 1225 aa10.68□□□□□ -0.7
SCARNA20.1-201ENST00000516009 SETBP1Q9Y6X0 1596 aa10.68□□□□□ -0.7
SCARNA20.1-201ENST00000516009 PIK3C2GO75747 1445 aa10.67□□□□□ -0.7
SCARNA20.1-201ENST00000516009 ZFYVE9O95405 1425 aa10.67□□□□□ -0.7
SCARNA20.1-201ENST00000516009 CCDC7Q96M83 1385 aa10.67□□□□□ -0.7
SCARNA20.1-201ENST00000516009 WASHC2AQ641Q2 1341 aa10.67□□□□□ -0.7
SCARNA20.1-201ENST00000516009 VGFO15240 615 aaPredicted RBP10.67□□□□□ -0.7
SCARNA20.1-201ENST00000516009 RIMS1Q86UR5 1692 aaKnown RBP10.66□□□□□ -0.7
SCARNA20.1-201ENST00000516009 ST20-MTHFSA0A0A6YYL1 179 aa10.66□□□□□ -0.7
SCARNA20.1-201ENST00000516009 UBR1Q8IWV7 1749 aa10.66□□□□□ -0.7
SCARNA20.1-201ENST00000516009 A2ML1A8K2U0 1454 aa10.66□□□□□ -0.7
SCARNA20.1-201ENST00000516009 SCAF11Q99590 1463 aaKnown RBP10.66□□□□□ -0.7
SCARNA20.1-201ENST00000516009 C11orf95C9JLR9 678 aaPredicted RBP10.65□□□□□ -0.7
SCARNA20.1-201ENST00000516009 CFAP70Q5T0N1 1121 aa10.65□□□□□ -0.7
SCARNA20.1-201ENST00000516009 ADAMTSL3P82987 1691 aa10.65□□□□□ -0.7
SCARNA20.1-201ENST00000516009 EIF3AQ14152 1382 aaKnown RBP10.65□□□□□ -0.71
SCARNA20.1-201ENST00000516009 KIF7Q2M1P5 1343 aa10.64□□□□□ -0.71
SCARNA20.1-201ENST00000516009 NLRP1Q9C000 1473 aa10.64□□□□□ -0.71
SCARNA20.1-201ENST00000516009 MIER1Q8N108 512 aa10.64□□□□□ -0.71
SCARNA20.1-201ENST00000516009 C14orf93Q9H972 538 aaKnown RBP10.64□□□□□ -0.71
SCARNA20.1-201ENST00000516009 NUTM2DQ5VT03 806 aaPredicted RBP10.63□□□□□ -0.71
SCARNA20.1-201ENST00000516009 ADGRB1O14514 1584 aa10.62□□□□□ -0.71
SCARNA20.1-201ENST00000516009 RIMS2Q9UQ26 1411 aa10.62□□□□□ -0.71
SCARNA20.1-201ENST00000516009 CEBPAP49715 358 aaPredicted RBP10.62□□□□□ -0.71
SCARNA20.1-201ENST00000516009 MYO3AQ8NEV4 1616 aa10.62□□□□□ -0.71
SCARNA20.1-201ENST00000516009 POLR3GLQ9BT43 218 aa10.61□□□□□ -0.71
SCARNA20.1-201ENST00000516009 HDGFP51858 240 aaKnown RBP10.6□□□□□ -0.71
SCARNA20.1-201ENST00000516009 PLPPR3Q6T4P5 718 aa10.6□□□□□ -0.71
SCARNA20.1-201ENST00000516009 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.6□□□□□ -0.71
SCARNA20.1-201ENST00000516009 TESK2Q96S53 571 aa10.6□□□□□ -0.71
SCARNA20.1-201ENST00000516009 ALKQ9UM73 1620 aa10.59□□□□□ -0.71
SCARNA20.1-201ENST00000516009 ARHGEF28Q8N1W1 1705 aaKnown RBP10.59□□□□□ -0.71
SCARNA20.1-201ENST00000516009 TMF1P82094 1093 aa10.59□□□□□ -0.71
SCARNA20.1-201ENST00000516009 QRICH2Q9H0J4 1663 aa10.59□□□□□ -0.71
SCARNA20.1-201ENST00000516009 SETD1AO15047 1707 aaKnown RBP10.58□□□□□ -0.72
SCARNA20.1-201ENST00000516009 SETD1BQ9UPS6 1966 aaKnown RBP10.58□□□□□ -0.72
SCARNA20.1-201ENST00000516009 TMEM2Q9UHN6 1383 aa10.58□□□□□ -0.72
SCARNA20.1-201ENST00000516009 ANP32CO43423 234 aa10.58□□□□□ -0.72
SCARNA20.1-201ENST00000516009 SLC24A1O60721 1099 aa10.58□□□□□ -0.72
SCARNA20.1-201ENST00000516009 ASXL1Q8IXJ9 1541 aa10.58□□□□□ -0.72
SCARNA20.1-201ENST00000516009 DISP3Q9P2K9 1392 aa10.57□□□□□ -0.72
SCARNA20.1-201ENST00000516009 TMEM132EQ6IEE7 984 aa10.57□□□□□ -0.72
SCARNA20.1-201ENST00000516009 NRXN3Q9Y4C0 1643 aa10.57□□□□□ -0.72
SCARNA20.1-201ENST00000516009 CEP170BQ9Y4F5 1589 aaPredicted RBP10.56□□□□□ -0.72
SCARNA20.1-201ENST00000516009 TRAK1Q9UPV9 953 aa10.56□□□□□ -0.72
SCARNA20.1-201ENST00000516009 ZNF142P52746 1687 aaPredicted RBP10.56□□□□□ -0.72
SCARNA20.1-201ENST00000516009 CENPJQ9HC77 1338 aaPredicted RBP10.56□□□□□ -0.72
SCARNA20.1-201ENST00000516009 SBNO2Q9Y2G9 1366 aa10.55□□□□□ -0.72
SCARNA20.1-201ENST00000516009 SLIT1O75093 1534 aa10.55□□□□□ -0.72
SCARNA20.1-201ENST00000516009 CDCA8Q53HL2 280 aa10.55□□□□□ -0.72
SCARNA20.1-201ENST00000516009 SENP3Q9H4L4 574 aaPredicted RBP10.55□□□□□ -0.72
SCARNA20.1-201ENST00000516009 THEMISQ8N1K5 641 aaPredicted RBP10.54□□□□□ -0.72
SCARNA20.1-201ENST00000516009 YTHDC2Q9H6S0 1430 aaKnown RBP10.54□□□□□ -0.72
SCARNA20.1-201ENST00000516009 PTPRMP28827 1452 aa10.54□□□□□ -0.72
SCARNA20.1-201ENST00000516009 ARHGAP23Q9P227 1491 aa10.54□□□□□ -0.72
SCARNA20.1-201ENST00000516009 EID1Q9Y6B2 187 aa10.53□□□□□ -0.72
SCARNA20.1-201ENST00000516009 KNDC1Q76NI1 1749 aa10.53□□□□□ -0.72
SCARNA20.1-201ENST00000516009 TXNDC2Q86VQ3 553 aa10.52□□□□□ -0.73
SCARNA20.1-201ENST00000516009 BCANQ96GW7 911 aa10.52□□□□□ -0.73
SCARNA20.1-201ENST00000516009 STK26Q9P289 416 aa10.52□□□□□ -0.73
SCARNA20.1-201ENST00000516009 MYOM1P52179 1685 aa10.52□□□□□ -0.73
SCARNA20.1-201ENST00000516009 DLC1Q96QB1 1528 aa10.52□□□□□ -0.73
SCARNA20.1-201ENST00000516009 PLEKHG1Q9ULL1 1385 aa10.52□□□□□ -0.73
SCARNA20.1-201ENST00000516009 LRPPRCP42704 1394 aaKnown RBP10.51□□□□□ -0.73
SCARNA20.1-201ENST00000516009 CCER2I3L3R5 266 aa10.5□□□□□ -0.73
SCARNA20.1-201ENST00000516009 LTKP29376 864 aa10.5□□□□□ -0.73
SCARNA20.1-201ENST00000516009 ABCC11Q96J66 1382 aa10.49□□□□□ -0.73
SCARNA20.1-201ENST00000516009 ADAMTS13Q76LX8 1427 aa10.49□□□□□ -0.73
SCARNA20.1-201ENST00000516009 DIP2AQ14689 1571 aa10.48□□□□□ -0.73
SCARNA20.1-201ENST00000516009 PRKRIP1Q9H875 184 aaPredicted RBP10.48□□□□□ -0.73
SCARNA20.1-201ENST00000516009 POGKQ9P215 609 aa10.48□□□□□ -0.73
SCARNA20.1-201ENST00000516009 METP08581 1390 aa10.48□□□□□ -0.73
SCARNA20.1-201ENST00000516009 TULP4Q9NRJ4 1543 aa10.48□□□□□ -0.73
SCARNA20.1-201ENST00000516009 PRAM1Q96QH2 718 aa10.47□□□□□ -0.73
SCARNA20.1-201ENST00000516009 PANK3Q9H999 370 aa10.47□□□□□ -0.73
SCARNA20.1-201ENST00000516009 EVC2Q86UK5 1308 aa10.47□□□□□ -0.73
SCARNA20.1-201ENST00000516009 TECPR2O15040 1411 aa10.47□□□□□ -0.73
SCARNA20.1-201ENST00000516009 MED14O60244 1454 aa10.47□□□□□ -0.73
SCARNA20.1-201ENST00000516009 CPS1P31327 1500 aa10.47□□□□□ -0.73
SCARNA20.1-201ENST00000516009 SAFB2Q14151 953 aaKnown RBP eCLIP10.46□□□□□ -0.73
SCARNA20.1-201ENST00000516009 FAM135BQ49AJ0 1406 aa10.45□□□□□ -0.74
SCARNA20.1-201ENST00000516009 KTN1Q86UP2 1357 aaKnown RBP10.45□□□□□ -0.74
SCARNA20.1-201ENST00000516009 YTHDC1Q96MU7 727 aaKnown RBP10.45□□□□□ -0.74
SCARNA20.1-201ENST00000516009 PUS7Q96PZ0 661 aaKnown RBP10.45□□□□□ -0.74
SCARNA20.1-201ENST00000516009 MINK1Q8N4C8 1332 aaPredicted RBP10.44□□□□□ -0.74
SCARNA20.1-201ENST00000516009 PER1O15534 1290 aaPredicted RBP10.44□□□□□ -0.74
SCARNA20.1-201ENST00000516009 ANKLE2Q86XL3 938 aa10.44□□□□□ -0.74
SCARNA20.1-201ENST00000516009 SIRT1Q96EB6 747 aa10.44□□□□□ -0.74
SCARNA20.1-201ENST00000516009 SLC26A8Q96RN1 970 aa10.44□□□□□ -0.74
SCARNA20.1-201ENST00000516009 TBX22Q9Y458 520 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms