RNA–Protein interactions for RNA: ENST00000515943.1

RNU4-29P-201, Transcript of RNA, U4 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU4-29P, Length 174 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-29P-201ENST00000515943 IRF6O14896 467 aa7.67□□□□□ -1.18
RNU4-29P-201ENST00000515943 RNF40O75150 1001 aa7.67□□□□□ -1.18
RNU4-29P-201ENST00000515943 BARGINQ6ZT62 677 aa7.67□□□□□ -1.18
RNU4-29P-201ENST00000515943 NYAP1Q6ZVC0 841 aa7.67□□□□□ -1.18
RNU4-29P-201ENST00000515943 CCDC102AQ96A19 550 aa7.67□□□□□ -1.18
RNU4-29P-201ENST00000515943 PHOX2BQ99453 314 aa7.67□□□□□ -1.18
RNU4-29P-201ENST00000515943 PPP4CP60510 307 aa7.66□□□□□ -1.18
RNU4-29P-201ENST00000515943 NLRP7Q8WX94 980 aa7.65□□□□□ -1.18
RNU4-29P-201ENST00000515943 SLC4A3P48751 1232 aa7.64□□□□□ -1.19
RNU4-29P-201ENST00000515943 NECTIN2Q92692 538 aa7.64□□□□□ -1.19
RNU4-29P-201ENST00000515943 DAXXQ9UER7 740 aaPredicted RBP7.62□□□□□ -1.19
RNU4-29P-201ENST00000515943 SLC10A3P09131 477 aa7.61□□□□□ -1.19
RNU4-29P-201ENST00000515943 APLP1P51693 650 aa7.61□□□□□ -1.19
RNU4-29P-201ENST00000515943 KRI1Q8N9T8 703 aaKnown RBP7.61□□□□□ -1.19
RNU4-29P-201ENST00000515943 PLA2G2EQ9NZK7 142 aa7.61□□□□□ -1.19
RNU4-29P-201ENST00000515943 ITGBL1O95965 494 aaPredicted RBP7.6□□□□□ -1.19
RNU4-29P-201ENST00000515943 CFHP08603 1231 aa7.59□□□□□ -1.19
RNU4-29P-201ENST00000515943 MDM2Q00987 491 aaPredicted RBP7.58□□□□□ -1.2
RNU4-29P-201ENST00000515943 PRR14Q9BWN1 585 aa7.58□□□□□ -1.2
RNU4-29P-201ENST00000515943 DDX11L8A8MPP1 907 aa7.57□□□□□ -1.2
RNU4-29P-201ENST00000515943 AMHR2Q16671 573 aa7.57□□□□□ -1.2
RNU4-29P-201ENST00000515943 KMT5BQ4FZB7 885 aa7.57□□□□□ -1.2
RNU4-29P-201ENST00000515943 IFFO2Q5TF58 517 aa7.57□□□□□ -1.2
RNU4-29P-201ENST00000515943 SULF1Q8IWU6 871 aa7.57□□□□□ -1.2
RNU4-29P-201ENST00000515943 TMUB1Q9BVT8 246 aa7.57□□□□□ -1.2
RNU4-29P-201ENST00000515943 ACTN4O43707 911 aaKnown RBP7.56□□□□□ -1.2
RNU4-29P-201ENST00000515943 CLCN1P35523 988 aa7.56□□□□□ -1.2
RNU4-29P-201ENST00000515943 TJAP1Q5JTD0 557 aa7.56□□□□□ -1.2
RNU4-29P-201ENST00000515943 MTRQ99707 1265 aa7.56□□□□□ -1.2
RNU4-29P-201ENST00000515943 GPCPD1Q9NPB8 672 aa7.56□□□□□ -1.2
RNU4-29P-201ENST00000515943 RSPH4AQ5TD94 716 aa7.55□□□□□ -1.2
RNU4-29P-201ENST00000515943 RDH13Q8NBN7 331 aa7.55□□□□□ -1.2
RNU4-29P-201ENST00000515943 AK7Q96M32 723 aa7.55□□□□□ -1.2
RNU4-29P-201ENST00000515943 TRIM66O15016 1216 aa7.54□□□□□ -1.2
RNU4-29P-201ENST00000515943 CD46P15529 392 aa7.54□□□□□ -1.2
RNU4-29P-201ENST00000515943 REPIN1Q9BWE0 567 aaKnown RBP7.54□□□□□ -1.2
RNU4-29P-201ENST00000515943 SLC24A3Q9HC58 644 aa7.54□□□□□ -1.2
RNU4-29P-201ENST00000515943 KCNC4Q03721 635 aa7.53□□□□□ -1.2
RNU4-29P-201ENST00000515943 IL21Q9HBE4 155 aa7.53□□□□□ -1.2
RNU4-29P-201ENST00000515943 FAM217BQ9NTX9 383 aaPredicted RBP7.53□□□□□ -1.2
RNU4-29P-201ENST00000515943 PCDHB3Q9Y5E6 796 aa7.53□□□□□ -1.2
RNU4-29P-201ENST00000515943 GCGRP47871 477 aa7.52□□□□□ -1.21
RNU4-29P-201ENST00000515943 BLOC1S3Q6QNY0 202 aa7.52□□□□□ -1.21
RNU4-29P-201ENST00000515943 COPS2P61201 443 aa7.51□□□□□ -1.21
RNU4-29P-201ENST00000515943 TTLL12Q14166 644 aaPredicted RBP7.51□□□□□ -1.21
RNU4-29P-201ENST00000515943 PARP9Q8IXQ6 854 aa7.51□□□□□ -1.21
RNU4-29P-201ENST00000515943 A0A0G2JS52 829 aa7.5□□□□□ -1.21
RNU4-29P-201ENST00000515943 GIGYF2Q6Y7W6 1299 aaKnown RBP7.5□□□□□ -1.21
RNU4-29P-201ENST00000515943 ZNF516Q92618 1163 aa7.5□□□□□ -1.21
RNU4-29P-201ENST00000515943 FUT2Q10981 343 aa7.49□□□□□ -1.21
RNU4-29P-201ENST00000515943 ZPR1O75312 459 aa7.48□□□□□ -1.21
RNU4-29P-201ENST00000515943 PDE4DQ08499 809 aa7.48□□□□□ -1.21
RNU4-29P-201ENST00000515943 PUS10Q3MIT2 529 aaKnown RBP7.48□□□□□ -1.21
RNU4-29P-201ENST00000515943 SSTR3P32745 418 aaPredicted RBP7.47□□□□□ -1.21
RNU4-29P-201ENST00000515943 MORN1Q5T089 497 aa7.47□□□□□ -1.21
RNU4-29P-201ENST00000515943 TLL1O43897 1013 aa7.46□□□□□ -1.22
RNU4-29P-201ENST00000515943 KDM4AO75164 1064 aa7.46□□□□□ -1.22
RNU4-29P-201ENST00000515943 NR1I2O75469 434 aa7.46□□□□□ -1.22
RNU4-29P-201ENST00000515943 ATP6V1AP38606 617 aa7.46□□□□□ -1.22
RNU4-29P-201ENST00000515943 NKX2-3Q8TAU0 364 aa7.46□□□□□ -1.22
RNU4-29P-201ENST00000515943 MS4A1P11836 297 aa7.44□□□□□ -1.22
RNU4-29P-201ENST00000515943 USP46P62068 366 aa7.44□□□□□ -1.22
RNU4-29P-201ENST00000515943 SCUBE3Q8IX30 993 aa7.44□□□□□ -1.22
RNU4-29P-201ENST00000515943 HOXA2O43364 376 aa7.43□□□□□ -1.22
RNU4-29P-201ENST00000515943 TPRNQ4KMQ1 711 aa7.43□□□□□ -1.22
RNU4-29P-201ENST00000515943 GRIPAP1Q4V328 841 aa7.43□□□□□ -1.22
RNU4-29P-201ENST00000515943 ADH1BP00325 375 aa7.42□□□□□ -1.22
RNU4-29P-201ENST00000515943 THAP11Q96EK4 314 aa7.42□□□□□ -1.22
RNU4-29P-201ENST00000515943 BEGAINQ9BUH8 593 aa7.42□□□□□ -1.22
RNU4-29P-201ENST00000515943 SLC27A5Q9Y2P5 690 aa7.42□□□□□ -1.22
RNU4-29P-201ENST00000515943 NUTM1Q86Y26 1132 aa7.41□□□□□ -1.22
RNU4-29P-201ENST00000515943 SPIRE2Q8WWL2 714 aa7.41□□□□□ -1.22
RNU4-29P-201ENST00000515943 HLA-CQ95604 372 aa7.41□□□□□ -1.22
RNU4-29P-201ENST00000515943 PPP1R18Q6NYC8 613 aa7.4□□□□□ -1.22
RNU4-29P-201ENST00000515943 SALL2Q9Y467 1007 aaPredicted RBP7.4□□□□□ -1.22
RNU4-29P-201ENST00000515943 RGS20O76081 388 aa7.39□□□□□ -1.23
RNU4-29P-201ENST00000515943 RNF19BQ6ZMZ0 732 aa7.39□□□□□ -1.23
RNU4-29P-201ENST00000515943 SPSB2Q99619 263 aa7.39□□□□□ -1.23
RNU4-29P-201ENST00000515943 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.39□□□□□ -1.23
RNU4-29P-201ENST00000515943 FMNL1O95466 1100 aaPredicted RBP7.38□□□□□ -1.23
RNU4-29P-201ENST00000515943 S1PR4O95977 384 aa7.38□□□□□ -1.23
RNU4-29P-201ENST00000515943 GGCXP38435 758 aa7.38□□□□□ -1.23
RNU4-29P-201ENST00000515943 GUCA2AQ02747 115 aa7.38□□□□□ -1.23
RNU4-29P-201ENST00000515943 BRICD5Q6PL45 260 aa7.38□□□□□ -1.23
RNU4-29P-201ENST00000515943 GPBP1L1Q9HC44 474 aaPredicted RBP7.38□□□□□ -1.23
RNU4-29P-201ENST00000515943 Q3C1V9 767 aa7.37□□□□□ -1.23
RNU4-29P-201ENST00000515943 TBC1D2Q9BYX2 928 aa7.37□□□□□ -1.23
RNU4-29P-201ENST00000515943 SLC6A16Q9GZN6 736 aa7.37□□□□□ -1.23
RNU4-29P-201ENST00000515943 KDM4CQ9H3R0 1056 aa7.37□□□□□ -1.23
RNU4-29P-201ENST00000515943 MOXD2PA6NHM9 499 aa7.36□□□□□ -1.23
RNU4-29P-201ENST00000515943 FDX1P10109 184 aa7.36□□□□□ -1.23
RNU4-29P-201ENST00000515943 DIXDC1Q155Q3 683 aa7.36□□□□□ -1.23
RNU4-29P-201ENST00000515943 RNF223E7ERA6 249 aa7.35□□□□□ -1.23
RNU4-29P-201ENST00000515943 NDUFV2P19404 249 aa7.35□□□□□ -1.23
RNU4-29P-201ENST00000515943 MSS51Q4VC12 460 aa7.35□□□□□ -1.23
RNU4-29P-201ENST00000515943 FAM160A2Q8N612 972 aaPredicted RBP7.35□□□□□ -1.23
RNU4-29P-201ENST00000515943 RSBN1LQ6PCB5 846 aaPredicted RBP7.34□□□□□ -1.23
RNU4-29P-201ENST00000515943 PRDM9Q9NQV7 894 aa7.34□□□□□ -1.23
RNU4-29P-201ENST00000515943 PCDHGC3Q9UN70 934 aa7.34□□□□□ -1.23
RNU4-29P-201ENST00000515943 SPTLC1O15269 473 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms