RNA–Protein interactions for RNA: ENST00000515855.5

NREP-223, Transcript of neuronal regeneration related protein, human

TSL 4 BASIC

Gene NREP, Length 801 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NREP-223	ENST00000515855	PLPP6	Q8IY26	295 aa		11.31	□□□□□ -0.6
NREP-223	ENST00000515855	AKNA	Q7Z591	1439 aa		11.31	□□□□□ -0.6
NREP-223	ENST00000515855	CDK13	Q14004	1512 aa	Known RBP	11.3	□□□□□ -0.6
NREP-223	ENST00000515855	RICTOR	Q6R327	1708 aa		11.3	□□□□□ -0.6
NREP-223	ENST00000515855	TTC37	Q6PGP7	1564 aa		11.3	□□□□□ -0.6
NREP-223	ENST00000515855	BCORL1	Q5H9F3	1711 aa		11.29	□□□□□ -0.6
NREP-223	ENST00000515855	PSD	A5PKW4	1024 aa	Predicted RBP	11.29	□□□□□ -0.6
NREP-223	ENST00000515855	UBTF	P17480	764 aa	Known RBP	11.29	□□□□□ -0.6
NREP-223	ENST00000515855	DSG2	Q14126	1118 aa		11.29	□□□□□ -0.6
NREP-223	ENST00000515855	GPHN	Q9NQX3	736 aa	Predicted RBP	11.29	□□□□□ -0.6
NREP-223	ENST00000515855	PLA2G2E	Q9NZK7	142 aa		11.29	□□□□□ -0.6
NREP-223	ENST00000515855	FANCA	O15360	1455 aa		11.29	□□□□□ -0.6
NREP-223	ENST00000515855	DENND4B	O75064	1496 aa	Predicted RBP	11.29	□□□□□ -0.6
NREP-223	ENST00000515855	PTPRM	P28827	1452 aa		11.29	□□□□□ -0.6
NREP-223	ENST00000515855	HCST	Q9UBK5	93 aa		11.28	□□□□□ -0.6
NREP-223	ENST00000515855	CFAP74	Q9C0B2	1584 aa		11.28	□□□□□ -0.6
NREP-223	ENST00000515855	ARHGAP35	Q9NRY4	1499 aa		11.27	□□□□□ -0.6
NREP-223	ENST00000515855	TK2	O00142	265 aa		11.27	□□□□□ -0.61
NREP-223	ENST00000515855	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.27	□□□□□ -0.61
NREP-223	ENST00000515855	MADD	Q8WXG6	1647 aa		11.27	□□□□□ -0.61
NREP-223	ENST00000515855	ARHGEF40	Q8TER5	1519 aa		11.26	□□□□□ -0.61
NREP-223	ENST00000515855	HS6ST3	Q8IZP7	471 aa		11.26	□□□□□ -0.61
NREP-223	ENST00000515855	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.25	□□□□□ -0.61
NREP-223	ENST00000515855	SIGLEC1	Q9BZZ2	1709 aa		11.25	□□□□□ -0.61
NREP-223	ENST00000515855	PLCH2	O75038	1416 aa		11.25	□□□□□ -0.61
NREP-223	ENST00000515855	FMN1	Q68DA7	1419 aa		11.25	□□□□□ -0.61
NREP-223	ENST00000515855	ZMYM4	Q5VZL5	1548 aa		11.25	□□□□□ -0.61
NREP-223	ENST00000515855	HECW1	Q76N89	1606 aa		11.24	□□□□□ -0.61
NREP-223	ENST00000515855	SCAPER	Q9BY12	1400 aa		11.23	□□□□□ -0.61
NREP-223	ENST00000515855	YEATS2	Q9ULM3	1422 aa		11.23	□□□□□ -0.61
NREP-223	ENST00000515855	RIMS1	Q86UR5	1692 aa	Known RBP	11.23	□□□□□ -0.61
NREP-223	ENST00000515855	LRRIQ1	Q96JM4	1722 aa		11.23	□□□□□ -0.61
NREP-223	ENST00000515855	KIF14	Q15058	1648 aa		11.22	□□□□□ -0.61
NREP-223	ENST00000515855	ZFYVE16	Q7Z3T8	1539 aa		11.22	□□□□□ -0.61
NREP-223	ENST00000515855	MYO5C	Q9NQX4	1742 aa		11.21	□□□□□ -0.61
NREP-223	ENST00000515855	MAGI2	Q86UL8	1455 aa		11.21	□□□□□ -0.61
NREP-223	ENST00000515855	PPP4R3B	Q5MIZ7	849 aa		11.21	□□□□□ -0.61
NREP-223	ENST00000515855	POGZ	Q7Z3K3	1410 aa		11.2	□□□□□ -0.62
NREP-223	ENST00000515855	NKX1-1	Q15270	411 aa	Predicted RBP	11.2	□□□□□ -0.62
NREP-223	ENST00000515855	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.2	□□□□□ -0.62
NREP-223	ENST00000515855	LMTK3	Q96Q04	1460 aa		11.19	□□□□□ -0.62
NREP-223	ENST00000515855	EFCAB2	Q5VUJ9	269 aa		11.19	□□□□□ -0.62
NREP-223	ENST00000515855	PCF11	O94913	1555 aa	Known RBP	11.19	□□□□□ -0.62
NREP-223	ENST00000515855	TRO	Q12816	1431 aa	Predicted RBP	11.18	□□□□□ -0.62
NREP-223	ENST00000515855	OXER1	Q8TDS5	423 aa		11.18	□□□□□ -0.62
NREP-223	ENST00000515855	MLEC	Q14165	292 aa		11.17	□□□□□ -0.62
NREP-223	ENST00000515855	ATP10A	O60312	1499 aa		11.17	□□□□□ -0.62
NREP-223	ENST00000515855	KCTD12	Q96CX2	325 aa	Known RBP	11.16	□□□□□ -0.62
NREP-223	ENST00000515855	KCNK17	Q96T54	332 aa		11.16	□□□□□ -0.62
NREP-223	ENST00000515855	CDC42BPB	Q9Y5S2	1711 aa		11.15	□□□□□ -0.62
NREP-223	ENST00000515855	ARHGAP5	Q13017	1502 aa		11.15	□□□□□ -0.62
NREP-223	ENST00000515855	AFAP1	Q8N556	730 aa		11.15	□□□□□ -0.62
NREP-223	ENST00000515855	CRISPLD2	Q9H0B8	497 aa		11.15	□□□□□ -0.62
NREP-223	ENST00000515855	CLIP1	P30622	1438 aa		11.15	□□□□□ -0.62
NREP-223	ENST00000515855	FER1L4	A9Z1Z3	1794 aa		11.15	□□□□□ -0.62
NREP-223	ENST00000515855	HSPA2	P54652	639 aa		11.14	□□□□□ -0.63
NREP-223	ENST00000515855	VPS9D1	Q9Y2B5	631 aa		11.14	□□□□□ -0.63
NREP-223	ENST00000515855	C9orf84	Q5VXU9	1444 aa		11.14	□□□□□ -0.63
NREP-223	ENST00000515855	CASKIN1	Q8WXD9	1431 aa		11.14	□□□□□ -0.63
NREP-223	ENST00000515855	ARHGEF12	Q9NZN5	1544 aa		11.14	□□□□□ -0.63
NREP-223	ENST00000515855	ZNF518A	Q6AHZ1	1483 aa		11.13	□□□□□ -0.63
NREP-223	ENST00000515855	KDM5C	P41229	1560 aa		11.13	□□□□□ -0.63
NREP-223	ENST00000515855	TBC1D12	O60347	775 aa		11.13	□□□□□ -0.63
NREP-223	ENST00000515855	CHGA	P10645	457 aa	Known RBP	11.12	□□□□□ -0.63
NREP-223	ENST00000515855	FBXO41	Q8TF61	875 aa		11.12	□□□□□ -0.63
NREP-223	ENST00000515855	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
NREP-223	ENST00000515855	PREX2	Q70Z35	1606 aa		11.11	□□□□□ -0.63
NREP-223	ENST00000515855	CCDC18	Q5T9S5	1454 aa		11.11	□□□□□ -0.63
NREP-223	ENST00000515855	DIP2C	Q9Y2E4	1556 aa		11.11	□□□□□ -0.63
NREP-223	ENST00000515855	CEBPA	P49715	358 aa	Predicted RBP	11.1	□□□□□ -0.63
NREP-223	ENST00000515855	NCKAP5L	Q9HCH0	1330 aa		11.09	□□□□□ -0.63
NREP-223	ENST00000515855	TRAPPC8	Q9Y2L5	1435 aa		11.09	□□□□□ -0.63
NREP-223	ENST00000515855	ABCC1	P33527	1531 aa		11.09	□□□□□ -0.63
NREP-223	ENST00000515855	ABCA6	Q8N139	1617 aa		11.09	□□□□□ -0.63
NREP-223	ENST00000515855	ITSN2	Q9NZM3	1697 aa		11.09	□□□□□ -0.63
NREP-223	ENST00000515855	MLH3	Q9UHC1	1453 aa		11.09	□□□□□ -0.63
NREP-223	ENST00000515855	ZNF454	Q8N9F8	522 aa		11.09	□□□□□ -0.63
NREP-223	ENST00000515855	BCL2L12	Q9HB09	334 aa		11.09	□□□□□ -0.63
NREP-223	ENST00000515855	CDC42BPA	Q5VT25	1732 aa		11.09	□□□□□ -0.63
NREP-223	ENST00000515855	RERE	Q9P2R6	1566 aa		11.08	□□□□□ -0.64
NREP-223	ENST00000515855	FYCO1	Q9BQS8	1478 aa		11.07	□□□□□ -0.64
NREP-223	ENST00000515855	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.07	□□□□□ -0.64
NREP-223	ENST00000515855	FOSB	P53539	338 aa		11.07	□□□□□ -0.64
NREP-223	ENST00000515855	PPP1R15B	Q5SWA1	713 aa		11.07	□□□□□ -0.64
NREP-223	ENST00000515855	SLC4A5	Q9BY07	1137 aa		11.07	□□□□□ -0.64
NREP-223	ENST00000515855	PREX1	Q8TCU6	1659 aa		11.07	□□□□□ -0.64
NREP-223	ENST00000515855	KIDINS220	Q9ULH0	1771 aa		11.05	□□□□□ -0.64
NREP-223	ENST00000515855	AGL	P35573	1532 aa		11.04	□□□□□ -0.64
NREP-223	ENST00000515855	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.04	□□□□□ -0.64
NREP-223	ENST00000515855	SAMD9L	Q8IVG5	1584 aa		11.04	□□□□□ -0.64
NREP-223	ENST00000515855	PTPN5	P54829	565 aa		11.04	□□□□□ -0.64
NREP-223	ENST00000515855	ZBED2	Q9BTP6	218 aa		11.04	□□□□□ -0.64
NREP-223	ENST00000515855	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.04	□□□□□ -0.64
NREP-223	ENST00000515855	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.04	□□□□□ -0.64
NREP-223	ENST00000515855	C3	P01024	1663 aa		11.04	□□□□□ -0.64
NREP-223	ENST00000515855	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.03	□□□□□ -0.64
NREP-223	ENST00000515855	STRC	Q7RTU9	1775 aa		11.02	□□□□□ -0.65
NREP-223	ENST00000515855	SYCP2	Q9BX26	1530 aa		11.01	□□□□□ -0.65
NREP-223	ENST00000515855	THSD4	Q6ZMP0	1018 aa		11.01	□□□□□ -0.65
NREP-223	ENST00000515855	CERK	Q8TCT0	537 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms