RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 U2AF1Q01081 240 aaKnown RBP eCLIP17.16■□□□□ 0.343e-7■□□□□ 9.6
SH3TC1-225ENST00000515682 UBE2Q2Q8WVN8 375 aa17.16■□□□□ 0.34
SH3TC1-225ENST00000515682 ROCK1Q13464 1354 aa17.15■□□□□ 0.34
SH3TC1-225ENST00000515682 MSNP26038 577 aaKnown RBP17.15■□□□□ 0.34
SH3TC1-225ENST00000515682 C8orf34Q49A92 452 aa17.14■□□□□ 0.33
SH3TC1-225ENST00000515682 GBP4Q96PP9 640 aa17.14■□□□□ 0.33
SH3TC1-225ENST00000515682 SMC4Q9NTJ3 1288 aa17.14■□□□□ 0.33
SH3TC1-225ENST00000515682 WDR62O43379 1518 aa17.13■□□□□ 0.33
SH3TC1-225ENST00000515682 VGFO15240 615 aaPredicted RBP17.12■□□□□ 0.33
SH3TC1-225ENST00000515682 DUSP27Q5VZP5 1158 aa17.12■□□□□ 0.33
SH3TC1-225ENST00000515682 CHMP5Q9NZZ3 219 aa17.12■□□□□ 0.33
SH3TC1-225ENST00000515682 PTMAP06454 111 aaKnown RBP17.12■□□□□ 0.33
SH3TC1-225ENST00000515682 TRAK2O60296 914 aa17.11■□□□□ 0.33
SH3TC1-225ENST00000515682 EID1Q9Y6B2 187 aa17.11■□□□□ 0.33
SH3TC1-225ENST00000515682 UGGT2Q9NYU1 1516 aa17.11■□□□□ 0.33
SH3TC1-225ENST00000515682 SOX12O15370 315 aa17.1■□□□□ 0.33
SH3TC1-225ENST00000515682 PDZRN3Q9UPQ7 1066 aa17.1■□□□□ 0.33
SH3TC1-225ENST00000515682 PLEKHH2Q8IVE3 1493 aa17.1■□□□□ 0.33
SH3TC1-225ENST00000515682 DNTTIP2Q5QJE6 756 aaKnown RBP17.1■□□□□ 0.33
SH3TC1-225ENST00000515682 C22orf23Q9BZE7 217 aa17.1■□□□□ 0.33
SH3TC1-225ENST00000515682 DDX11L8A8MPP1 907 aa17.09■□□□□ 0.33
SH3TC1-225ENST00000515682 PKNOX2Q96KN3 472 aa17.09■□□□□ 0.33
SH3TC1-225ENST00000515682 ADAMTS12P58397 1594 aa17.09■□□□□ 0.33
SH3TC1-225ENST00000515682 SLFN5Q08AF3 891 aa17.09■□□□□ 0.33
SH3TC1-225ENST00000515682 SPATA31E1Q6ZUB1 1445 aa17.08■□□□□ 0.33
SH3TC1-225ENST00000515682 IGHDP01880 384 aa17.08■□□□□ 0.33
SH3TC1-225ENST00000515682 LRPPRCP42704 1394 aaKnown RBP17.08■□□□□ 0.32
SH3TC1-225ENST00000515682 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
SH3TC1-225ENST00000515682 EIF3AQ14152 1382 aaKnown RBP17.08■□□□□ 0.32
SH3TC1-225ENST00000515682 TEX14Q8IWB6 1497 aa17.08■□□□□ 0.32
SH3TC1-225ENST00000515682 MCM4P33991 863 aa17.05■□□□□ 0.32
SH3TC1-225ENST00000515682 HAP1P54257 671 aaPredicted RBP17.05■□□□□ 0.32
SH3TC1-225ENST00000515682 HDGFL2Q7Z4V5 671 aaPredicted RBP17.05■□□□□ 0.32
SH3TC1-225ENST00000515682 MRE11P49959 708 aa17.05■□□□□ 0.32
SH3TC1-225ENST00000515682 ATP10BO94823 1461 aa17.05■□□□□ 0.32
SH3TC1-225ENST00000515682 THOC2Q8NI27 1593 aaKnown RBP17.05■□□□□ 0.32
SH3TC1-225ENST00000515682 CD109Q6YHK3 1445 aa17.04■□□□□ 0.32
SH3TC1-225ENST00000515682 APBB1O00213 710 aa17.04■□□□□ 0.32
SH3TC1-225ENST00000515682 SEC24BO95487 1268 aa17.04■□□□□ 0.32
SH3TC1-225ENST00000515682 NUTM2FA1L443 756 aa17.04■□□□□ 0.32
SH3TC1-225ENST00000515682 KDM6BO15054 1643 aa17.04■□□□□ 0.32
SH3TC1-225ENST00000515682 PDE3AQ14432 1141 aa17.03■□□□□ 0.32
SH3TC1-225ENST00000515682 ZKSCAN2Q63HK3 967 aa17.03■□□□□ 0.32
SH3TC1-225ENST00000515682 NUP153P49790 1475 aaKnown RBP17.03■□□□□ 0.32
SH3TC1-225ENST00000515682 ERBINQ96RT1 1412 aa17.03■□□□□ 0.32
SH3TC1-225ENST00000515682 PANK2Q9BZ23 570 aa17.03■□□□□ 0.32
SH3TC1-225ENST00000515682 DDX49Q9Y6V7 483 aaKnown RBP17.03■□□□□ 0.32
SH3TC1-225ENST00000515682 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
SH3TC1-225ENST00000515682 CAMSAP2Q08AD1 1489 aa17.03■□□□□ 0.32
SH3TC1-225ENST00000515682 DISP3Q9P2K9 1392 aa17.02■□□□□ 0.32
SH3TC1-225ENST00000515682 PARD3Q8TEW0 1356 aa17.01■□□□□ 0.31
SH3TC1-225ENST00000515682 LNPKQ9C0E8 428 aa17.01■□□□□ 0.31
SH3TC1-225ENST00000515682 PLCB2Q00722 1185 aa17.01■□□□□ 0.31
SH3TC1-225ENST00000515682 DZIP1LQ8IYY4 767 aaKnown RBP17■□□□□ 0.31
SH3TC1-225ENST00000515682 TCP11L2Q8N4U5 519 aa17■□□□□ 0.31
SH3TC1-225ENST00000515682 RRAGDQ9NQL2 400 aaPredicted RBP17■□□□□ 0.31
SH3TC1-225ENST00000515682 CCDC141Q6ZP82 1450 aa17■□□□□ 0.31
SH3TC1-225ENST00000515682 TCOF1Q13428 1488 aaKnown RBP16.99■□□□□ 0.31
SH3TC1-225ENST00000515682 PLEKHH1Q9ULM0 1364 aa16.99■□□□□ 0.31
SH3TC1-225ENST00000515682 FOXD4L5Q5VV16 416 aaPredicted RBP16.99■□□□□ 0.31
SH3TC1-225ENST00000515682 FOXD4L4Q8WXT5 416 aaPredicted RBP16.99■□□□□ 0.31
SH3TC1-225ENST00000515682 PER1O15534 1290 aaPredicted RBP16.99■□□□□ 0.31
SH3TC1-225ENST00000515682 NUP160Q12769 1436 aa16.99■□□□□ 0.31
SH3TC1-225ENST00000515682 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
SH3TC1-225ENST00000515682 KDM2BQ8NHM5 1336 aa16.98■□□□□ 0.31
SH3TC1-225ENST00000515682 GRPEL1Q9HAV7 217 aa16.98■□□□□ 0.31
SH3TC1-225ENST00000515682 A0A0G2JS52 829 aa16.98■□□□□ 0.31
SH3TC1-225ENST00000515682 CALD1Q05682 793 aaKnown RBP16.98■□□□□ 0.31
SH3TC1-225ENST00000515682 KDM5BQ9UGL1 1544 aa16.98■□□□□ 0.31
SH3TC1-225ENST00000515682 GPATCH8Q9UKJ3 1502 aaKnown RBP16.98■□□□□ 0.31
SH3TC1-225ENST00000515682 KIF14Q15058 1648 aa16.97■□□□□ 0.31
SH3TC1-225ENST00000515682 XRCC6P12956 609 aaKnown RBP eCLIP16.97■□□□□ 0.31
SH3TC1-225ENST00000515682 ANKRD45Q5TZF3 282 aa16.97■□□□□ 0.31
SH3TC1-225ENST00000515682 TMEM132EQ6IEE7 984 aa16.97■□□□□ 0.31
SH3TC1-225ENST00000515682 TERF2IPQ9NYB0 399 aa16.97■□□□□ 0.31
SH3TC1-225ENST00000515682 ESPNB1AK53 854 aa16.97■□□□□ 0.31
SH3TC1-225ENST00000515682 IPO8O15397 1037 aaKnown RBP16.97■□□□□ 0.31
SH3TC1-225ENST00000515682 CFAP70Q5T0N1 1121 aa16.97■□□□□ 0.31
SH3TC1-225ENST00000515682 FAM13BQ9NYF5 915 aa16.97■□□□□ 0.31
SH3TC1-225ENST00000515682 MINK1Q8N4C8 1332 aaPredicted RBP16.97■□□□□ 0.31
SH3TC1-225ENST00000515682 CTTNBP2Q8WZ74 1663 aa16.97■□□□□ 0.31
SH3TC1-225ENST00000515682 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
SH3TC1-225ENST00000515682 RALGAPBQ86X10 1494 aa16.96■□□□□ 0.31
SH3TC1-225ENST00000515682 RAPGEF6Q8TEU7 1601 aa16.96■□□□□ 0.31
SH3TC1-225ENST00000515682 RUNDC1Q96C34 613 aa16.96■□□□□ 0.31
SH3TC1-225ENST00000515682 ELL2O00472 640 aaPredicted RBP16.95■□□□□ 0.3
SH3TC1-225ENST00000515682 SPINK5Q9NQ38 1064 aaPredicted RBP16.95■□□□□ 0.3
SH3TC1-225ENST00000515682 MAGI3Q5TCQ9 1506 aa16.95■□□□□ 0.3
SH3TC1-225ENST00000515682 KIAA0556O60303 1618 aa16.94■□□□□ 0.3
SH3TC1-225ENST00000515682 PZPP20742 1482 aa16.94■□□□□ 0.3
SH3TC1-225ENST00000515682 WWC1Q8IX03 1113 aa16.94■□□□□ 0.3
SH3TC1-225ENST00000515682 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
SH3TC1-225ENST00000515682 TSR2Q969E8 191 aaKnown RBP16.94■□□□□ 0.3
SH3TC1-225ENST00000515682 ADGRL1O94910 1474 aa16.93■□□□□ 0.3
SH3TC1-225ENST00000515682 DISP1Q96F81 1524 aa16.93■□□□□ 0.3
SH3TC1-225ENST00000515682 CASC1Q6TDU7 716 aa16.93■□□□□ 0.3
SH3TC1-225ENST00000515682 DENND4BO75064 1496 aaPredicted RBP16.93■□□□□ 0.3
SH3TC1-225ENST00000515682 RBM10P98175 930 aaKnown RBP16.92■□□□□ 0.3
SH3TC1-225ENST00000515682 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.92■□□□□ 0.3
SH3TC1-225ENST00000515682 SKOR2Q2VWA4 1001 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms