RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 PADI6Q6TGC4 694 aa10.79□□□□□ -0.68
NPHP3-211ENST00000515289 SND1Q7KZF4 910 aaKnown RBP eCLIP10.79□□□□□ -0.68
NPHP3-211ENST00000515289 RBM27Q9P2N5 1060 aaKnown RBP10.79□□□□□ -0.68
NPHP3-211ENST00000515289 SLC34A2O95436 690 aa10.78□□□□□ -0.68
NPHP3-211ENST00000515289 GJA5P36382 358 aa10.78□□□□□ -0.68
NPHP3-211ENST00000515289 RSBN1LQ6PCB5 846 aaPredicted RBP10.78□□□□□ -0.68
NPHP3-211ENST00000515289 TTC13Q8NBP0 860 aa10.78□□□□□ -0.68
NPHP3-211ENST00000515289 ADAMTS19Q8TE59 1207 aa10.77□□□□□ -0.69
NPHP3-211ENST00000515289 IVNS1ABPQ9Y6Y0 642 aa10.77□□□□□ -0.69
NPHP3-211ENST00000515289 LILRB3O75022 631 aa10.76□□□□□ -0.69
NPHP3-211ENST00000515289 AP1G2O75843 785 aa10.76□□□□□ -0.69
NPHP3-211ENST00000515289 RFX1P22670 979 aa10.76□□□□□ -0.69
NPHP3-211ENST00000515289 WASHC4Q2M389 1173 aa10.76□□□□□ -0.69
NPHP3-211ENST00000515289 ZNF710Q8N1W2 664 aa10.76□□□□□ -0.69
NPHP3-211ENST00000515289 NDUFB9Q9Y6M9 179 aa10.76□□□□□ -0.69
NPHP3-211ENST00000515289 USP17L8P0C7I0 530 aa10.75□□□□□ -0.69
NPHP3-211ENST00000515289 PPP1R12CQ9BZL4 782 aa10.75□□□□□ -0.69
NPHP3-211ENST00000515289 C19orf67A6NJJ6 358 aa10.74□□□□□ -0.69
NPHP3-211ENST00000515289 RBM46Q8TBY0 533 aaKnown RBP10.74□□□□□ -0.69
NPHP3-211ENST00000515289 CD46P15529 392 aa10.73□□□□□ -0.69
NPHP3-211ENST00000515289 QPCTQ16769 361 aa10.73□□□□□ -0.69
NPHP3-211ENST00000515289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.72□□□□□ -0.69
NPHP3-211ENST00000515289 PLCG2P16885 1265 aa10.72□□□□□ -0.69
NPHP3-211ENST00000515289 ATN1P54259 1190 aaPredicted RBP10.72□□□□□ -0.69
NPHP3-211ENST00000515289 JPH4Q96JJ6 628 aa10.72□□□□□ -0.69
NPHP3-211ENST00000515289 GJD4Q96KN9 370 aaPredicted RBP10.72□□□□□ -0.69
NPHP3-211ENST00000515289 CSPP1Q1MSJ5 1256 aa10.71□□□□□ -0.69
NPHP3-211ENST00000515289 NUTM1Q86Y26 1132 aa10.71□□□□□ -0.69
NPHP3-211ENST00000515289 VRTNQ9H8Y1 702 aa10.71□□□□□ -0.69
NPHP3-211ENST00000515289 MOXD2PA6NHM9 499 aa10.7□□□□□ -0.7
NPHP3-211ENST00000515289 GALR2O43603 387 aaPredicted RBP10.7□□□□□ -0.7
NPHP3-211ENST00000515289 RTL5Q5HYW3 569 aaPredicted RBP10.7□□□□□ -0.7
NPHP3-211ENST00000515289 PRPF38BQ5VTL8 546 aaKnown RBP10.69□□□□□ -0.7
NPHP3-211ENST00000515289 SULF1Q8IWU6 871 aa10.69□□□□□ -0.7
NPHP3-211ENST00000515289 CARNS1A5YM72 827 aa10.68□□□□□ -0.7
NPHP3-211ENST00000515289 PALM3A6NDB9 673 aaPredicted RBP10.68□□□□□ -0.7
NPHP3-211ENST00000515289 TMEM88BA6NKF7 163 aa10.68□□□□□ -0.7
NPHP3-211ENST00000515289 C6orf132Q5T0Z8 1188 aa10.68□□□□□ -0.7
NPHP3-211ENST00000515289 ATG7O95352 703 aa10.67□□□□□ -0.7
NPHP3-211ENST00000515289 GNEQ9Y223 722 aaKnown RBP10.67□□□□□ -0.7
NPHP3-211ENST00000515289 NUTM2BA6NNL0 878 aaPredicted RBP10.66□□□□□ -0.7
NPHP3-211ENST00000515289 NUTM2EB1AL46 878 aaPredicted RBP10.66□□□□□ -0.7
NPHP3-211ENST00000515289 NUTM2DQ5VT03 806 aaPredicted RBP10.66□□□□□ -0.7
NPHP3-211ENST00000515289 POTEHQ6S545 545 aa10.66□□□□□ -0.7
NPHP3-211ENST00000515289 NUTM2AQ8IVF1 878 aaPredicted RBP10.66□□□□□ -0.7
NPHP3-211ENST00000515289 ALG2Q9H553 416 aa10.66□□□□□ -0.7
NPHP3-211ENST00000515289 PCDHB15Q9Y5E8 787 aa10.66□□□□□ -0.7
NPHP3-211ENST00000515289 ATMINO43313 823 aaPredicted RBP10.65□□□□□ -0.7
NPHP3-211ENST00000515289 GPR37L1O60883 481 aa10.65□□□□□ -0.7
NPHP3-211ENST00000515289 LMOD1P29536 600 aaPredicted RBP10.65□□□□□ -0.7
NPHP3-211ENST00000515289 PRSS12P56730 875 aa10.65□□□□□ -0.7
NPHP3-211ENST00000515289 MYT1LQ9UL68 1186 aa10.65□□□□□ -0.7
NPHP3-211ENST00000515289 RCCD1A6NED2 376 aa10.64□□□□□ -0.71
NPHP3-211ENST00000515289 HMGB1P09429 215 aaKnown RBP10.64□□□□□ -0.71
NPHP3-211ENST00000515289 NDUFV2P19404 249 aa10.64□□□□□ -0.71
NPHP3-211ENST00000515289 ASTLQ6HA08 431 aaPredicted RBP10.64□□□□□ -0.71
NPHP3-211ENST00000515289 B4GALNT3Q6L9W6 998 aa10.64□□□□□ -0.71
NPHP3-211ENST00000515289 CLCN6P51797 869 aa10.63□□□□□ -0.71
NPHP3-211ENST00000515289 FOSBP53539 338 aa10.63□□□□□ -0.71
NPHP3-211ENST00000515289 VAC14Q08AM6 782 aa10.63□□□□□ -0.71
NPHP3-211ENST00000515289 MYO15BQ96JP2 1530 aa10.63□□□□□ -0.71
NPHP3-211ENST00000515289 SOX11P35716 441 aa10.62□□□□□ -0.71
NPHP3-211ENST00000515289 CABLES1Q8TDN4 633 aa10.62□□□□□ -0.71
NPHP3-211ENST00000515289 ZBTB3Q9H5J0 574 aa10.62□□□□□ -0.71
NPHP3-211ENST00000515289 RBM47A0AV96 593 aaKnown RBP10.61□□□□□ -0.71
NPHP3-211ENST00000515289 CDCA7LQ96GN5 454 aa10.61□□□□□ -0.71
NPHP3-211ENST00000515289 UCN2Q96RP3 112 aa10.61□□□□□ -0.71
NPHP3-211ENST00000515289 TRIM34Q9BYJ4 488 aa10.61□□□□□ -0.71
NPHP3-211ENST00000515289 TFIP11Q9UBB9 837 aaKnown RBP10.61□□□□□ -0.71
NPHP3-211ENST00000515289 PCDHGA4Q9Y5G9 962 aa10.61□□□□□ -0.71
NPHP3-211ENST00000515289 KDM4FA0A1W2PPD8 638 aa10.6□□□□□ -0.71
NPHP3-211ENST00000515289 UNCXA6NJT0 531 aa10.6□□□□□ -0.71
NPHP3-211ENST00000515289 EYA1Q99502 592 aa10.6□□□□□ -0.71
NPHP3-211ENST00000515289 HMX1Q9NP08 348 aaPredicted RBP10.6□□□□□ -0.71
NPHP3-211ENST00000515289 IGSF5Q9NSI5 407 aa10.6□□□□□ -0.71
NPHP3-211ENST00000515289 USP35Q9P2H5 1018 aa10.6□□□□□ -0.71
NPHP3-211ENST00000515289 DDX11L8A8MPP1 907 aa10.59□□□□□ -0.71
NPHP3-211ENST00000515289 ZDHHC16Q969W1 377 aa10.59□□□□□ -0.71
NPHP3-211ENST00000515289 MAFBQ9Y5Q3 323 aaPredicted RBP10.58□□□□□ -0.72
NPHP3-211ENST00000515289 ABCC9O60706 1549 aa10.58□□□□□ -0.72
NPHP3-211ENST00000515289 RSPH4AQ5TD94 716 aa10.57□□□□□ -0.72
NPHP3-211ENST00000515289 KDM4AO75164 1064 aa10.55□□□□□ -0.72
NPHP3-211ENST00000515289 HSP90B1P14625 803 aaKnown RBP10.55□□□□□ -0.72
NPHP3-211ENST00000515289 ERCC3P19447 782 aa10.55□□□□□ -0.72
NPHP3-211ENST00000515289 DNAJB2P25686 324 aa10.55□□□□□ -0.72
NPHP3-211ENST00000515289 USP46P62068 366 aa10.55□□□□□ -0.72
NPHP3-211ENST00000515289 CTDSPL2Q05D32 466 aa10.55□□□□□ -0.72
NPHP3-211ENST00000515289 PRR7Q8TB68 274 aa10.55□□□□□ -0.72
NPHP3-211ENST00000515289 ELOAQ14241 798 aaKnown RBP10.54□□□□□ -0.72
NPHP3-211ENST00000515289 CDCA8Q53HL2 280 aa10.54□□□□□ -0.72
NPHP3-211ENST00000515289 CCER1Q8TC90 406 aaPredicted RBP10.54□□□□□ -0.72
NPHP3-211ENST00000515289 PUS7Q96PZ0 661 aaKnown RBP10.54□□□□□ -0.72
NPHP3-211ENST00000515289 ZNF454Q8N9F8 522 aa10.53□□□□□ -0.72
NPHP3-211ENST00000515289 HELBQ8NG08 1087 aaPredicted RBP10.53□□□□□ -0.72
NPHP3-211ENST00000515289 TMEM134Q9H6X4 195 aa10.53□□□□□ -0.72
NPHP3-211ENST00000515289 FAM198AQ9UFP1 575 aa10.53□□□□□ -0.72
NPHP3-211ENST00000515289 C3orf67Q6ZVT6 689 aa10.52□□□□□ -0.73
NPHP3-211ENST00000515289 TXNDC2Q86VQ3 553 aa10.52□□□□□ -0.73
NPHP3-211ENST00000515289 ADAM33Q9BZ11 813 aa10.52□□□□□ -0.73
NPHP3-211ENST00000515289 HOXA2O43364 376 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms