RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 RBM33Q96EV2 1170 aaKnown RBP17.92■□□□□ 0.46
TRIO-222ENST00000515144 NOP58Q9Y2X3 529 aaKnown RBP17.91■□□□□ 0.46
TRIO-222ENST00000515144 USP47Q96K76 1375 aa17.91■□□□□ 0.46
TRIO-222ENST00000515144 GGNBP2Q9H3C7 697 aa17.91■□□□□ 0.46
TRIO-222ENST00000515144 MRC2Q9UBG0 1479 aa17.91■□□□□ 0.46
TRIO-222ENST00000515144 L1TD1Q5T7N2 865 aaKnown RBP17.9■□□□□ 0.46
TRIO-222ENST00000515144 SNAPC4Q5SXM2 1469 aa17.9■□□□□ 0.46
TRIO-222ENST00000515144 RBM42Q9BTD8 480 aaKnown RBP17.9■□□□□ 0.46
TRIO-222ENST00000515144 RIPK4P57078 832 aa17.9■□□□□ 0.46
TRIO-222ENST00000515144 DDX54Q8TDD1 881 aaKnown RBP17.9■□□□□ 0.46
TRIO-222ENST00000515144 TCEAL9Q9UHQ7 104 aa17.9■□□□□ 0.46
TRIO-222ENST00000515144 MTMR7Q9Y216 660 aa17.9■□□□□ 0.46
TRIO-222ENST00000515144 GRIN2BQ13224 1484 aa17.89■□□□□ 0.46
TRIO-222ENST00000515144 DIAPH1O60610 1272 aaKnown RBP17.89■□□□□ 0.45
TRIO-222ENST00000515144 KIAA2012Q0VF49 1180 aa17.88■□□□□ 0.45
TRIO-222ENST00000515144 NLRP13Q86W25 1043 aa17.88■□□□□ 0.45
TRIO-222ENST00000515144 TSPYL4Q9UJ04 414 aa17.88■□□□□ 0.45
TRIO-222ENST00000515144 TIMELESSQ9UNS1 1208 aa17.88■□□□□ 0.45
TRIO-222ENST00000515144 SLC26A8Q96RN1 970 aa17.88■□□□□ 0.45
TRIO-222ENST00000515144 DHX57Q6P158 1386 aaKnown RBP17.87■□□□□ 0.45
TRIO-222ENST00000515144 RIC3Q7Z5B4 369 aa17.87■□□□□ 0.45
TRIO-222ENST00000515144 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.87■□□□□ 0.45
TRIO-222ENST00000515144 NRDCO43847 1150 aa17.87■□□□□ 0.45
TRIO-222ENST00000515144 NAP1L5Q96NT1 182 aaPredicted RBP17.87■□□□□ 0.45
TRIO-222ENST00000515144 DHX16O60231 1041 aaKnown RBP17.87■□□□□ 0.45
TRIO-222ENST00000515144 HDAC5Q9UQL6 1122 aa17.87■□□□□ 0.45
TRIO-222ENST00000515144 CCDC27Q2M243 656 aa17.87■□□□□ 0.45
TRIO-222ENST00000515144 SYNJ2O15056 1496 aa17.86■□□□□ 0.45
TRIO-222ENST00000515144 PES1O00541 588 aaKnown RBP17.86■□□□□ 0.45
TRIO-222ENST00000515144 CCER2I3L3R5 266 aa17.86■□□□□ 0.45
TRIO-222ENST00000515144 IGF1RP08069 1367 aa17.85■□□□□ 0.45
TRIO-222ENST00000515144 CUX1P39880 1505 aa17.85■□□□□ 0.45
TRIO-222ENST00000515144 FKBP5Q13451 457 aaPredicted RBP17.85■□□□□ 0.45
TRIO-222ENST00000515144 APAF1O14727 1248 aa17.85■□□□□ 0.45
TRIO-222ENST00000515144 AMOTL1Q8IY63 956 aa17.85■□□□□ 0.45
TRIO-222ENST00000515144 KDM4AO75164 1064 aa17.84■□□□□ 0.45
TRIO-222ENST00000515144 CFAP44Q96MT7 982 aa17.84■□□□□ 0.45
TRIO-222ENST00000515144 PRAM1Q96QH2 718 aa17.83■□□□□ 0.45
TRIO-222ENST00000515144 SLC4A3P48751 1232 aa17.83■□□□□ 0.44
TRIO-222ENST00000515144 FOSBP53539 338 aa17.83■□□□□ 0.44
TRIO-222ENST00000515144 TOM1L2Q6ZVM7 507 aa17.83■□□□□ 0.44
TRIO-222ENST00000515144 GPRASP1Q5JY77 1395 aa17.83■□□□□ 0.44
TRIO-222ENST00000515144 SYNJ1O43426 1573 aa17.82■□□□□ 0.44
TRIO-222ENST00000515144 MYBBP1AQ9BQG0 1328 aaKnown RBP17.82■□□□□ 0.44
TRIO-222ENST00000515144 NOC3LQ8WTT2 800 aaKnown RBP17.82■□□□□ 0.44
TRIO-222ENST00000515144 MYOM3Q5VTT5 1437 aa17.82■□□□□ 0.44
TRIO-222ENST00000515144 AKAP17AQ02040 695 aaKnown RBP17.82■□□□□ 0.44
TRIO-222ENST00000515144 SCAPERQ9BY12 1400 aa17.81■□□□□ 0.44
TRIO-222ENST00000515144 SUPT6HQ7KZ85 1726 aaKnown RBP17.81■□□□□ 0.44
TRIO-222ENST00000515144 H3BQV1 296 aa17.81■□□□□ 0.44
TRIO-222ENST00000515144 IFFO2Q5TF58 517 aa17.81■□□□□ 0.44
TRIO-222ENST00000515144 DDX58O95786 925 aaKnown RBP17.8■□□□□ 0.44
TRIO-222ENST00000515144 KIF16BQ96L93 1317 aa17.8■□□□□ 0.44
TRIO-222ENST00000515144 NEUROD6Q96NK8 337 aa17.8■□□□□ 0.44
TRIO-222ENST00000515144 SF3A1Q15459 793 aaKnown RBP17.79■□□□□ 0.44
TRIO-222ENST00000515144 MCTP1Q6DN14 999 aa17.79■□□□□ 0.44
TRIO-222ENST00000515144 GLIPR1L2Q4G1C9 344 aa17.79■□□□□ 0.44
TRIO-222ENST00000515144 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
TRIO-222ENST00000515144 COG6Q9Y2V7 657 aa17.78■□□□□ 0.44
TRIO-222ENST00000515144 IFIT2P09913 472 aaKnown RBP17.77■□□□□ 0.44
TRIO-222ENST00000515144 ADAMTS2O95450 1211 aa17.77■□□□□ 0.43
TRIO-222ENST00000515144 CFAP70Q5T0N1 1121 aa17.77■□□□□ 0.43
TRIO-222ENST00000515144 FAM184AQ8NB25 1140 aa17.77■□□□□ 0.43
TRIO-222ENST00000515144 STK11IPQ8N1F8 1099 aa17.76■□□□□ 0.43
TRIO-222ENST00000515144 THEMISQ8N1K5 641 aaPredicted RBP17.76■□□□□ 0.43
TRIO-222ENST00000515144 ARID3AQ99856 593 aa17.76■□□□□ 0.43
TRIO-222ENST00000515144 CHAF1AQ13111 956 aaPredicted RBP17.76■□□□□ 0.43
TRIO-222ENST00000515144 DNAJC5BQ9UF47 199 aa17.76■□□□□ 0.43
TRIO-222ENST00000515144 SETD1BQ9UPS6 1966 aaKnown RBP17.76■□□□□ 0.43
TRIO-222ENST00000515144 KIF6Q6ZMV9 814 aa17.76■□□□□ 0.43
TRIO-222ENST00000515144 MIA2Q96PC5 1412 aa17.75■□□□□ 0.43
TRIO-222ENST00000515144 MSNP26038 577 aaKnown RBP17.75■□□□□ 0.43
TRIO-222ENST00000515144 KIF21BO75037 1637 aa17.75■□□□□ 0.43
TRIO-222ENST00000515144 ANKLE2Q86XL3 938 aa17.74■□□□□ 0.43
TRIO-222ENST00000515144 DIAPH3Q9NSV4 1193 aa17.74■□□□□ 0.43
TRIO-222ENST00000515144 SYNE3Q6ZMZ3 975 aa17.74■□□□□ 0.43
TRIO-222ENST00000515144 MYL6BP14649 208 aa17.74■□□□□ 0.43
TRIO-222ENST00000515144 CDK19Q9BWU1 502 aa17.73■□□□□ 0.43
TRIO-222ENST00000515144 G3BP1Q13283 466 aaKnown RBP eCLIP17.73■□□□□ 0.43
TRIO-222ENST00000515144 IKQ13123 557 aaPredicted RBP17.73■□□□□ 0.43
TRIO-222ENST00000515144 NCOA2Q15596 1464 aa17.73■□□□□ 0.43
TRIO-222ENST00000515144 TOPBP1Q92547 1522 aa17.73■□□□□ 0.43
TRIO-222ENST00000515144 CFTRP13569 1480 aa17.73■□□□□ 0.43
TRIO-222ENST00000515144 NFXL1Q6ZNB6 911 aa17.73■□□□□ 0.43
TRIO-222ENST00000515144 HTATSF1O43719 755 aaKnown RBP17.72■□□□□ 0.43
TRIO-222ENST00000515144 CRBNQ96SW2 442 aa17.72■□□□□ 0.43
TRIO-222ENST00000515144 TPD52L1Q16890 204 aaPredicted RBP17.72■□□□□ 0.43
TRIO-222ENST00000515144 ANKRD50Q9ULJ7 1429 aa17.72■□□□□ 0.43
TRIO-222ENST00000515144 HECW1Q76N89 1606 aa17.72■□□□□ 0.43
TRIO-222ENST00000515144 FGD6Q6ZV73 1430 aa17.72■□□□□ 0.43
TRIO-222ENST00000515144 ZC3H6P61129 1189 aaKnown RBP17.71■□□□□ 0.43
TRIO-222ENST00000515144 GBP4Q96PP9 640 aa17.71■□□□□ 0.43
TRIO-222ENST00000515144 FBXO3Q9UK99 471 aa17.71■□□□□ 0.43
TRIO-222ENST00000515144 ZKSCAN2Q63HK3 967 aa17.71■□□□□ 0.43
TRIO-222ENST00000515144 IFT140Q96RY7 1462 aa17.71■□□□□ 0.43
TRIO-222ENST00000515144 PDE3BQ13370 1112 aa17.7■□□□□ 0.42
TRIO-222ENST00000515144 SMG6Q86US8 1419 aaKnown RBP17.7■□□□□ 0.42
TRIO-222ENST00000515144 ANO2Q9NQ90 1003 aa17.7■□□□□ 0.42
TRIO-222ENST00000515144 LRRC9Q6ZRR7 1453 aa17.7■□□□□ 0.42
TRIO-222ENST00000515144 PHLDB1Q86UU1 1377 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms