RNA–Protein interactions for RNA: ENST00000515013.5

PRDM8-210, Transcript of PR/SET domain 8, humanhuman

TSL 1 (best)

Gene PRDM8, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-210ENST00000515013 RRAGDQ9NQL2 400 aaPredicted RBP27.07■■□□□ 1.92
PRDM8-210ENST00000515013 CC2D1BQ5T0F9 858 aaKnown RBP27.07■■□□□ 1.92
PRDM8-210ENST00000515013 POGKQ9P215 609 aa27.07■■□□□ 1.92
PRDM8-210ENST00000515013 RGS3P49796 1198 aa27.05■■□□□ 1.92
PRDM8-210ENST00000515013 GPRASP1Q5JY77 1395 aa27.04■■□□□ 1.92
PRDM8-210ENST00000515013 ABCC1P33527 1531 aa27.02■■□□□ 1.92
PRDM8-210ENST00000515013 ERBINQ96RT1 1412 aa27.02■■□□□ 1.92
PRDM8-210ENST00000515013 CLASP1Q7Z460 1538 aa27.01■■□□□ 1.91
PRDM8-210ENST00000515013 MAGI2Q86UL8 1455 aa27.01■■□□□ 1.91
PRDM8-210ENST00000515013 SPAG9O60271 1321 aaKnown RBP27■■□□□ 1.91
PRDM8-210ENST00000515013 PANK3Q9H999 370 aa27■■□□□ 1.91
PRDM8-210ENST00000515013 PKNOX2Q96KN3 472 aa26.99■■□□□ 1.91
PRDM8-210ENST00000515013 PRDM15P57071 1507 aaPredicted RBP26.99■■□□□ 1.91
PRDM8-210ENST00000515013 COL17A1Q9UMD9 1497 aaPredicted RBP26.98■■□□□ 1.91
PRDM8-210ENST00000515013 L1TD1Q5T7N2 865 aaKnown RBP26.98■■□□□ 1.91
PRDM8-210ENST00000515013 DUSP27Q5VZP5 1158 aa26.97■■□□□ 1.91
PRDM8-210ENST00000515013 USP19O94966 1318 aa26.96■■□□□ 1.91
PRDM8-210ENST00000515013 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.95■■□□□ 1.9
PRDM8-210ENST00000515013 ATP10AO60312 1499 aa26.94■■□□□ 1.9
PRDM8-210ENST00000515013 UHRF1BP1LA0JNW5 1464 aa26.93■■□□□ 1.9
PRDM8-210ENST00000515013 GLIPR1L2Q4G1C9 344 aa26.92■■□□□ 1.9
PRDM8-210ENST00000515013 ADAMTS8Q9UP79 889 aa26.92■■□□□ 1.9
PRDM8-210ENST00000515013 PLEKHH1Q9ULM0 1364 aa26.9■■□□□ 1.9
PRDM8-210ENST00000515013 TMF1P82094 1093 aa26.9■■□□□ 1.9
PRDM8-210ENST00000515013 BECN1Q14457 450 aa26.88■■□□□ 1.89
PRDM8-210ENST00000515013 ZFYVE16Q7Z3T8 1539 aa26.88■■□□□ 1.89
PRDM8-210ENST00000515013 LAMC1P11047 1609 aa26.86■■□□□ 1.89
PRDM8-210ENST00000515013 EIF2AK4Q9P2K8 1649 aaKnown RBP26.86■■□□□ 1.89
PRDM8-210ENST00000515013 ZNF521Q96K83 1311 aa26.86■■□□□ 1.89
PRDM8-210ENST00000515013 SLKQ9H2G2 1235 aaPredicted RBP26.86■■□□□ 1.89
PRDM8-210ENST00000515013 KIF3BO15066 747 aa26.85■■□□□ 1.89
PRDM8-210ENST00000515013 GOLGA2Q08379 1002 aa26.85■■□□□ 1.89
PRDM8-210ENST00000515013 EIF3AQ14152 1382 aaKnown RBP26.84■■□□□ 1.89
PRDM8-210ENST00000515013 SEC24BO95487 1268 aa26.83■■□□□ 1.89
PRDM8-210ENST00000515013 ANTXR1Q9H6X2 564 aa26.83■■□□□ 1.89
PRDM8-210ENST00000515013 SCAPERQ9BY12 1400 aa26.82■■□□□ 1.88
PRDM8-210ENST00000515013 FANCAO15360 1455 aa26.81■■□□□ 1.88
PRDM8-210ENST00000515013 MADDQ8WXG6 1647 aa26.81■■□□□ 1.88
PRDM8-210ENST00000515013 RNF17Q9BXT8 1623 aaKnown RBP26.81■■□□□ 1.88
PRDM8-210ENST00000515013 CLTCL1P53675 1640 aa26.81■■□□□ 1.88
PRDM8-210ENST00000515013 XRCC6P12956 609 aaKnown RBP eCLIP26.8■■□□□ 1.88
PRDM8-210ENST00000515013 NAP1L5Q96NT1 182 aaPredicted RBP26.8■■□□□ 1.88
PRDM8-210ENST00000515013 VIRMAQ69YN4 1812 aaKnown RBP26.8■■□□□ 1.88
PRDM8-210ENST00000515013 WDR7Q9Y4E6 1490 aa26.8■■□□□ 1.88
PRDM8-210ENST00000515013 PNNQ9H307 717 aaKnown RBP26.79■■□□□ 1.88
PRDM8-210ENST00000515013 IGHDP01880 384 aa26.79■■□□□ 1.88
PRDM8-210ENST00000515013 RTEL1-TNFRSF6BF6WH68 1400 aa26.78■■□□□ 1.88
PRDM8-210ENST00000515013 CLCN1P35523 988 aa26.78■■□□□ 1.88
PRDM8-210ENST00000515013 SLFN5Q08AF3 891 aa26.78■■□□□ 1.88
PRDM8-210ENST00000515013 TRPM2O94759 1503 aa26.78■■□□□ 1.88
PRDM8-210ENST00000515013 UGGT1Q9NYU2 1555 aa26.77■■□□□ 1.88
PRDM8-210ENST00000515013 WDR43Q15061 677 aaKnown RBP eCLIP26.77■■□□□ 1.88
PRDM8-210ENST00000515013 FSD2A1L4K1 749 aa26.76■■□□□ 1.87
PRDM8-210ENST00000515013 GOLGA6L3A6NEY3 463 aa26.76■■□□□ 1.87
PRDM8-210ENST00000515013 VSIG10Q8N0Z9 540 aa26.76■■□□□ 1.87
PRDM8-210ENST00000515013 ATP7AQ04656 1500 aa26.76■■□□□ 1.87
PRDM8-210ENST00000515013 SPHKAPQ2M3C7 1700 aa26.76■■□□□ 1.87
PRDM8-210ENST00000515013 NLRP1Q9C000 1473 aa26.76■■□□□ 1.87
PRDM8-210ENST00000515013 ZMYND15Q9H091 742 aa26.75■■□□□ 1.87
PRDM8-210ENST00000515013 PTPRTO14522 1441 aa26.75■■□□□ 1.87
PRDM8-210ENST00000515013 MAPK8IP3Q9UPT6 1336 aa26.74■■□□□ 1.87
PRDM8-210ENST00000515013 TRMT2AQ8IZ69 625 aaKnown RBP26.74■■□□□ 1.87
PRDM8-210ENST00000515013 ARXQ96QS3 562 aa26.74■■□□□ 1.87
PRDM8-210ENST00000515013 HSP90AA2PQ14568 343 aaPredicted RBP26.73■■□□□ 1.87
PRDM8-210ENST00000515013 ADGRL1O94910 1474 aa26.73■■□□□ 1.87
PRDM8-210ENST00000515013 RRP9O43818 475 aaKnown RBP26.72■■□□□ 1.87
PRDM8-210ENST00000515013 HSP90AA1P07900 732 aaKnown RBP26.72■■□□□ 1.87
PRDM8-210ENST00000515013 CFAP70Q5T0N1 1121 aa26.72■■□□□ 1.87
PRDM8-210ENST00000515013 CEP152O94986 1710 aa26.72■■□□□ 1.87
PRDM8-210ENST00000515013 IQGAP1P46940 1657 aa26.71■■□□□ 1.87
PRDM8-210ENST00000515013 BCAR3O75815 825 aa26.71■■□□□ 1.87
PRDM8-210ENST00000515013 PPP2R1AP30153 589 aa26.71■■□□□ 1.87
PRDM8-210ENST00000515013 DEPDC5O75140 1603 aa26.71■■□□□ 1.87
PRDM8-210ENST00000515013 KNSTRNQ9Y448 316 aa26.71■■□□□ 1.87
PRDM8-210ENST00000515013 PANK2Q9BZ23 570 aa26.7■■□□□ 1.87
PRDM8-210ENST00000515013 ABCA9Q8IUA7 1624 aa26.7■■□□□ 1.86
PRDM8-210ENST00000515013 ARAP3Q8WWN8 1544 aa26.69■■□□□ 1.86
PRDM8-210ENST00000515013 INO80Q9ULG1 1556 aaPredicted RBP26.69■■□□□ 1.86
PRDM8-210ENST00000515013 AMER1Q5JTC6 1135 aaPredicted RBP26.69■■□□□ 1.86
PRDM8-210ENST00000515013 ADGRF5Q8IZF2 1346 aa26.69■■□□□ 1.86
PRDM8-210ENST00000515013 SCAF11Q99590 1463 aaKnown RBP26.68■■□□□ 1.86
PRDM8-210ENST00000515013 KANK1Q14678 1352 aa26.67■■□□□ 1.86
PRDM8-210ENST00000515013 ASXL2Q76L83 1435 aa26.67■■□□□ 1.86
PRDM8-210ENST00000515013 SPINK5Q9NQ38 1064 aaPredicted RBP26.67■■□□□ 1.86
PRDM8-210ENST00000515013 TET3O43151 1660 aa26.67■■□□□ 1.86
PRDM8-210ENST00000515013 NKTRP30414 1462 aaKnown RBP26.67■■□□□ 1.86
PRDM8-210ENST00000515013 TBC1D2Q9BYX2 928 aa26.67■■□□□ 1.86
PRDM8-210ENST00000515013 CGNL1Q0VF96 1302 aa26.65■■□□□ 1.86
PRDM8-210ENST00000515013 MCM4P33991 863 aa26.65■■□□□ 1.86
PRDM8-210ENST00000515013 TBC1D32Q96NH3 1257 aa26.64■■□□□ 1.86
PRDM8-210ENST00000515013 GZF1Q9H116 711 aaPredicted RBP26.64■■□□□ 1.85
PRDM8-210ENST00000515013 MROH1Q8NDA8 1641 aa26.64■■□□□ 1.85
PRDM8-210ENST00000515013 VWDEQ8N2E2 1590 aa26.63■■□□□ 1.85
PRDM8-210ENST00000515013 CLUAP1Q96AJ1 413 aa26.63■■□□□ 1.85
PRDM8-210ENST00000515013 UPF2Q9HAU5 1272 aaKnown RBP26.63■■□□□ 1.85
PRDM8-210ENST00000515013 PDE3AQ14432 1141 aa26.61■■□□□ 1.85
PRDM8-210ENST00000515013 CHGAP10645 457 aaKnown RBP26.6■■□□□ 1.85
PRDM8-210ENST00000515013 CCDC146Q8IYE0 955 aa26.59■■□□□ 1.85
PRDM8-210ENST00000515013 E9PSI1 815 aa26.58■■□□□ 1.84
PRDM8-210ENST00000515013 MRE11P49959 708 aa26.58■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms