RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 KRI1Q8N9T8 703 aaKnown RBP9.36□□□□□ -0.91
CCDC30-214ENST00000514642 PPP6R1Q9UPN7 881 aa9.36□□□□□ -0.91
CCDC30-214ENST00000514642 EIF2S2P20042 333 aaKnown RBP9.35□□□□□ -0.91
CCDC30-214ENST00000514642 PLEKHO1Q53GL0 409 aaPredicted RBP9.35□□□□□ -0.91
CCDC30-214ENST00000514642 ERICH3Q5RHP9 1530 aa9.35□□□□□ -0.91
CCDC30-214ENST00000514642 LRPPRCP42704 1394 aaKnown RBP9.35□□□□□ -0.91
CCDC30-214ENST00000514642 RUSC2Q8N2Y8 1516 aa9.35□□□□□ -0.91
CCDC30-214ENST00000514642 TOM1O60784 492 aa9.35□□□□□ -0.91
CCDC30-214ENST00000514642 RBM42Q9BTD8 480 aaKnown RBP9.35□□□□□ -0.91
CCDC30-214ENST00000514642 NCOA2Q15596 1464 aa9.35□□□□□ -0.91
CCDC30-214ENST00000514642 RWDD1Q9H446 243 aaPredicted RBP9.34□□□□□ -0.91
CCDC30-214ENST00000514642 MIER1Q8N108 512 aa9.34□□□□□ -0.91
CCDC30-214ENST00000514642 GRIN2AQ12879 1464 aa9.34□□□□□ -0.91
CCDC30-214ENST00000514642 RGS3P49796 1198 aa9.34□□□□□ -0.91
CCDC30-214ENST00000514642 KIF14Q15058 1648 aa9.34□□□□□ -0.91
CCDC30-214ENST00000514642 TROQ12816 1431 aaPredicted RBP9.34□□□□□ -0.91
CCDC30-214ENST00000514642 BICRAQ9NZM4 1560 aa9.34□□□□□ -0.91
CCDC30-214ENST00000514642 SPG7Q9UQ90 795 aa9.34□□□□□ -0.91
CCDC30-214ENST00000514642 FGD6Q6ZV73 1430 aa9.34□□□□□ -0.92
CCDC30-214ENST00000514642 RAD21O60216 631 aa9.33□□□□□ -0.92
CCDC30-214ENST00000514642 PANK3Q9H999 370 aa9.33□□□□□ -0.92
CCDC30-214ENST00000514642 C9orf78Q9NZ63 289 aaPredicted RBP9.33□□□□□ -0.92
CCDC30-214ENST00000514642 ROCK1Q13464 1354 aa9.33□□□□□ -0.92
CCDC30-214ENST00000514642 RPGRIP1LQ68CZ1 1315 aa9.33□□□□□ -0.92
CCDC30-214ENST00000514642 TRIM6-TRIM34B2RNG4 842 aa9.33□□□□□ -0.92
CCDC30-214ENST00000514642 CCDC146Q8IYE0 955 aa9.33□□□□□ -0.92
CCDC30-214ENST00000514642 DENND4BO75064 1496 aaPredicted RBP9.33□□□□□ -0.92
CCDC30-214ENST00000514642 C9orf84Q5VXU9 1444 aa9.33□□□□□ -0.92
CCDC30-214ENST00000514642 HTATSF1O43719 755 aaKnown RBP9.33□□□□□ -0.92
CCDC30-214ENST00000514642 ADGRL1O94910 1474 aa9.33□□□□□ -0.92
CCDC30-214ENST00000514642 PRDM11Q9NQV5 511 aa9.32□□□□□ -0.92
CCDC30-214ENST00000514642 ZNF644Q9H582 1327 aaPredicted RBP9.32□□□□□ -0.92
CCDC30-214ENST00000514642 WWC1Q8IX03 1113 aa9.32□□□□□ -0.92
CCDC30-214ENST00000514642 ABCA10Q8WWZ4 1543 aa9.32□□□□□ -0.92
CCDC30-214ENST00000514642 CCAR1Q8IX12 1150 aaKnown RBP9.32□□□□□ -0.92
CCDC30-214ENST00000514642 PMFBP1Q8TBY8 1022 aa9.32□□□□□ -0.92
CCDC30-214ENST00000514642 ZNF692Q9BU19 519 aaPredicted RBP9.32□□□□□ -0.92
CCDC30-214ENST00000514642 CCDC34Q96HJ3 373 aa9.31□□□□□ -0.92
CCDC30-214ENST00000514642 NRDCO43847 1150 aa9.31□□□□□ -0.92
CCDC30-214ENST00000514642 UBAP1LF5GYI3 381 aa9.31□□□□□ -0.92
CCDC30-214ENST00000514642 HSCBQ8IWL3 235 aa9.31□□□□□ -0.92
CCDC30-214ENST00000514642 CABP2Q9NPB3 220 aa9.31□□□□□ -0.92
CCDC30-214ENST00000514642 KIAA2012Q0VF49 1180 aa9.31□□□□□ -0.92
CCDC30-214ENST00000514642 CABP4P57796 275 aa9.3□□□□□ -0.92
CCDC30-214ENST00000514642 NGLY1Q96IV0 654 aa9.3□□□□□ -0.92
CCDC30-214ENST00000514642 RIC3Q7Z5B4 369 aa9.3□□□□□ -0.92
CCDC30-214ENST00000514642 RASSF8Q8NHQ8 419 aa9.3□□□□□ -0.92
CCDC30-214ENST00000514642 ST20-MTHFSA0A0A6YYL1 179 aa9.3□□□□□ -0.92
CCDC30-214ENST00000514642 PTMAP06454 111 aaKnown RBP9.3□□□□□ -0.92
CCDC30-214ENST00000514642 CHMP4CQ96CF2 233 aa9.3□□□□□ -0.92
CCDC30-214ENST00000514642 PRAM1Q96QH2 718 aa9.3□□□□□ -0.92
CCDC30-214ENST00000514642 RTEL1-TNFRSF6BF6WH68 1400 aa9.29□□□□□ -0.92
CCDC30-214ENST00000514642 CCER2I3L3R5 266 aa9.29□□□□□ -0.92
CCDC30-214ENST00000514642 LRRC9Q6ZRR7 1453 aa9.29□□□□□ -0.92
CCDC30-214ENST00000514642 AKAP17AQ02040 695 aaKnown RBP9.29□□□□□ -0.92
CCDC30-214ENST00000514642 SYNE3Q6ZMZ3 975 aa9.29□□□□□ -0.92
CCDC30-214ENST00000514642 GAS2L2Q8NHY3 880 aa9.29□□□□□ -0.92
CCDC30-214ENST00000514642 TSPYL4Q9UJ04 414 aa9.29□□□□□ -0.92
CCDC30-214ENST00000514642 SUPT6HQ7KZ85 1726 aaKnown RBP9.29□□□□□ -0.92
CCDC30-214ENST00000514642 SLC26A8Q96RN1 970 aa9.29□□□□□ -0.92
CCDC30-214ENST00000514642 TMEM132EQ6IEE7 984 aa9.28□□□□□ -0.92
CCDC30-214ENST00000514642 DDX54Q8TDD1 881 aaKnown RBP9.28□□□□□ -0.92
CCDC30-214ENST00000514642 CHAF1AQ13111 956 aaPredicted RBP9.28□□□□□ -0.92
CCDC30-214ENST00000514642 MYBBP1AQ9BQG0 1328 aaKnown RBP9.28□□□□□ -0.92
CCDC30-214ENST00000514642 L1TD1Q5T7N2 865 aaKnown RBP9.28□□□□□ -0.92
CCDC30-214ENST00000514642 USP47Q96K76 1375 aa9.27□□□□□ -0.93
CCDC30-214ENST00000514642 HFM1A2PYH4 1435 aa9.27□□□□□ -0.93
CCDC30-214ENST00000514642 ERBINQ96RT1 1412 aa9.27□□□□□ -0.93
CCDC30-214ENST00000514642 SUPT16HQ9Y5B9 1047 aaKnown RBP9.27□□□□□ -0.93
CCDC30-214ENST00000514642 MSH6P52701 1360 aa9.27□□□□□ -0.93
CCDC30-214ENST00000514642 ADAMTS2O95450 1211 aa9.27□□□□□ -0.93
CCDC30-214ENST00000514642 CDK19Q9BWU1 502 aa9.27□□□□□ -0.93
CCDC30-214ENST00000514642 KCNH5Q8NCM2 988 aa9.26□□□□□ -0.93
CCDC30-214ENST00000514642 G3BP1Q13283 466 aaKnown RBP eCLIP9.26□□□□□ -0.93
CCDC30-214ENST00000514642 CNKSR2Q8WXI2 1034 aa9.26□□□□□ -0.93
CCDC30-214ENST00000514642 KIF3AQ9Y496 699 aa9.26□□□□□ -0.93
CCDC30-214ENST00000514642 WDHD1O75717 1129 aaPredicted RBP9.25□□□□□ -0.93
CCDC30-214ENST00000514642 DHX16O60231 1041 aaKnown RBP9.25□□□□□ -0.93
CCDC30-214ENST00000514642 NECTIN2Q92692 538 aa9.25□□□□□ -0.93
CCDC30-214ENST00000514642 PPP4R2Q9NY27 417 aa9.25□□□□□ -0.93
CCDC30-214ENST00000514642 FAM135AQ9P2D6 1515 aa9.25□□□□□ -0.93
CCDC30-214ENST00000514642 PRM3Q9NNZ6 103 aa9.25□□□□□ -0.93
CCDC30-214ENST00000514642 RRP7AQ9Y3A4 280 aaKnown RBP9.25□□□□□ -0.93
CCDC30-214ENST00000514642 RIPK4P57078 832 aa9.25□□□□□ -0.93
CCDC30-214ENST00000514642 CCDC141Q6ZP82 1450 aa9.24□□□□□ -0.93
CCDC30-214ENST00000514642 FANCAO15360 1455 aa9.24□□□□□ -0.93
CCDC30-214ENST00000514642 PNISRQ8TF01 805 aaKnown RBP9.24□□□□□ -0.93
CCDC30-214ENST00000514642 URB2Q14146 1524 aaKnown RBP9.24□□□□□ -0.93
CCDC30-214ENST00000514642 GNAI1P63096 354 aa9.24□□□□□ -0.93
CCDC30-214ENST00000514642 TRIM44Q96DX7 344 aaPredicted RBP9.24□□□□□ -0.93
CCDC30-214ENST00000514642 IFIT2P09913 472 aaKnown RBP9.24□□□□□ -0.93
CCDC30-214ENST00000514642 AIMP1Q12904 312 aaKnown RBP9.24□□□□□ -0.93
CCDC30-214ENST00000514642 B4GALNT3Q6L9W6 998 aa9.24□□□□□ -0.93
CCDC30-214ENST00000514642 FAM177BA6PVY3 158 aa9.24□□□□□ -0.93
CCDC30-214ENST00000514642 UNC13AQ9UPW8 1703 aa9.23□□□□□ -0.93
CCDC30-214ENST00000514642 CCDC27Q2M243 656 aa9.23□□□□□ -0.93
CCDC30-214ENST00000514642 RCAN3Q9UKA8 241 aa9.23□□□□□ -0.93
CCDC30-214ENST00000514642 GNL3LQ9NVN8 582 aaKnown RBP9.23□□□□□ -0.93
CCDC30-214ENST00000514642 ERICH2A1L162 156 aa9.23□□□□□ -0.93
CCDC30-214ENST00000514642 APPP05067 770 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms