RNA–Protein interactions for RNA: ENST00000514561.5

SEC24D-214, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 3,806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-214ENST00000514561 CCDC144AA2RUR9 1427 aa6.18□□□□□ -1.42
SEC24D-214ENST00000514561 UNC13BO14795 1591 aa6.18□□□□□ -1.42
SEC24D-214ENST00000514561 PLB1Q6P1J6 1458 aa6.18□□□□□ -1.42
SEC24D-214ENST00000514561 ZCCHC11Q5TAX3 1644 aaKnown RBP6.18□□□□□ -1.42
SEC24D-214ENST00000514561 NAIPQ13075 1403 aa6.18□□□□□ -1.42
SEC24D-214ENST00000514561 CNTLNQ9NXG0 1405 aa6.18□□□□□ -1.42
SEC24D-214ENST00000514561 HFM1A2PYH4 1435 aa6.17□□□□□ -1.42
SEC24D-214ENST00000514561 ZBTB7CA1YPR0 619 aa6.17□□□□□ -1.42
SEC24D-214ENST00000514561 U2SURPO15042 1029 aaKnown RBP6.17□□□□□ -1.42
SEC24D-214ENST00000514561 SRPK2P78362 688 aaKnown RBP6.17□□□□□ -1.42
SEC24D-214ENST00000514561 RSPH6AQ9H0K4 717 aa6.17□□□□□ -1.42
SEC24D-214ENST00000514561 TRAK1Q9UPV9 953 aa6.17□□□□□ -1.42
SEC24D-214ENST00000514561 EPRSP07814 1512 aaKnown RBP6.17□□□□□ -1.42
SEC24D-214ENST00000514561 CCDC184Q52MB2 194 aa6.17□□□□□ -1.42
SEC24D-214ENST00000514561 FRAT1Q92837 279 aaPredicted RBP6.17□□□□□ -1.42
SEC24D-214ENST00000514561 PTPN23Q9H3S7 1636 aa6.17□□□□□ -1.42
SEC24D-214ENST00000514561 FAM43AQ8N2R8 423 aa6.17□□□□□ -1.42
SEC24D-214ENST00000514561 PANK3Q9H999 370 aa6.16□□□□□ -1.42
SEC24D-214ENST00000514561 ZBTB47Q9UFB7 747 aaPredicted RBP6.16□□□□□ -1.42
SEC24D-214ENST00000514561 NCOA1Q15788 1441 aa6.16□□□□□ -1.42
SEC24D-214ENST00000514561 VWDEQ8N2E2 1590 aa6.16□□□□□ -1.42
SEC24D-214ENST00000514561 KTN1Q86UP2 1357 aaKnown RBP6.16□□□□□ -1.42
SEC24D-214ENST00000514561 PDE4CQ08493 712 aa6.16□□□□□ -1.42
SEC24D-214ENST00000514561 NBPF1Q3BBV0 1214 aa6.16□□□□□ -1.42
SEC24D-214ENST00000514561 RSPH4AQ5TD94 716 aa6.16□□□□□ -1.42
SEC24D-214ENST00000514561 FOXD4L5Q5VV16 416 aaPredicted RBP6.16□□□□□ -1.42
SEC24D-214ENST00000514561 CCDC146Q8IYE0 955 aa6.16□□□□□ -1.42
SEC24D-214ENST00000514561 FOXD4L4Q8WXT5 416 aaPredicted RBP6.16□□□□□ -1.42
SEC24D-214ENST00000514561 RNF17Q9BXT8 1623 aaKnown RBP6.16□□□□□ -1.42
SEC24D-214ENST00000514561 BRD2P25440 801 aaKnown RBP6.16□□□□□ -1.42
SEC24D-214ENST00000514561 RGS3P49796 1198 aa6.16□□□□□ -1.42
SEC24D-214ENST00000514561 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.16□□□□□ -1.42
SEC24D-214ENST00000514561 LAS1LQ9Y4W2 734 aaKnown RBP6.16□□□□□ -1.42
SEC24D-214ENST00000514561 PPRC1Q5VV67 1664 aaKnown RBP6.16□□□□□ -1.42
SEC24D-214ENST00000514561 LAMC1P11047 1609 aa6.15□□□□□ -1.42
SEC24D-214ENST00000514561 ZMYM4Q5VZL5 1548 aa6.15□□□□□ -1.42
SEC24D-214ENST00000514561 ZC3H13Q5T200 1668 aaKnown RBP6.15□□□□□ -1.42
SEC24D-214ENST00000514561 ZMYND15Q9H091 742 aa6.15□□□□□ -1.42
SEC24D-214ENST00000514561 IGSF5Q9NSI5 407 aa6.15□□□□□ -1.42
SEC24D-214ENST00000514561 PTPRKQ15262 1439 aa6.15□□□□□ -1.42
SEC24D-214ENST00000514561 CCDC7Q96M83 1385 aa6.15□□□□□ -1.43
SEC24D-214ENST00000514561 INO80Q9ULG1 1556 aaPredicted RBP6.15□□□□□ -1.43
SEC24D-214ENST00000514561 E9PCH4 1651 aa6.15□□□□□ -1.43
SEC24D-214ENST00000514561 MAGI3Q5TCQ9 1506 aa6.15□□□□□ -1.43
SEC24D-214ENST00000514561 TROQ12816 1431 aaPredicted RBP6.14□□□□□ -1.43
SEC24D-214ENST00000514561 MORC1Q86VD1 984 aa6.14□□□□□ -1.43
SEC24D-214ENST00000514561 ARID3AQ99856 593 aa6.14□□□□□ -1.43
SEC24D-214ENST00000514561 KDM5CP41229 1560 aa6.14□□□□□ -1.43
SEC24D-214ENST00000514561 NUP153P49790 1475 aaKnown RBP6.14□□□□□ -1.43
SEC24D-214ENST00000514561 NUTM2FA1L443 756 aa6.14□□□□□ -1.43
SEC24D-214ENST00000514561 SPATA31E1Q6ZUB1 1445 aa6.14□□□□□ -1.43
SEC24D-214ENST00000514561 OSCARQ8IYS5 282 aa6.14□□□□□ -1.43
SEC24D-214ENST00000514561 CFAP53Q96M91 514 aa6.14□□□□□ -1.43
SEC24D-214ENST00000514561 NLRP13Q86W25 1043 aa6.13□□□□□ -1.43
SEC24D-214ENST00000514561 DAPK1P53355 1430 aa6.13□□□□□ -1.43
SEC24D-214ENST00000514561 KIF14Q15058 1648 aa6.13□□□□□ -1.43
SEC24D-214ENST00000514561 GSE1Q14687 1217 aa6.13□□□□□ -1.43
SEC24D-214ENST00000514561 PLIN1O60240 522 aa6.13□□□□□ -1.43
SEC24D-214ENST00000514561 VASPP50552 380 aaPredicted RBP6.13□□□□□ -1.43
SEC24D-214ENST00000514561 RALBP1Q15311 655 aa6.12□□□□□ -1.43
SEC24D-214ENST00000514561 C9orf84Q5VXU9 1444 aa6.12□□□□□ -1.43
SEC24D-214ENST00000514561 RCAN3Q9UKA8 241 aa6.12□□□□□ -1.43
SEC24D-214ENST00000514561 RRP7AQ9Y3A4 280 aaKnown RBP6.12□□□□□ -1.43
SEC24D-214ENST00000514561 ARHGAP5Q13017 1502 aa6.12□□□□□ -1.43
SEC24D-214ENST00000514561 NUDCQ9Y266 331 aa6.12□□□□□ -1.43
SEC24D-214ENST00000514561 ONECUT3O60422 494 aaPredicted RBP6.11□□□□□ -1.43
SEC24D-214ENST00000514561 TMEM132EQ6IEE7 984 aa6.11□□□□□ -1.43
SEC24D-214ENST00000514561 BACH2Q9BYV9 841 aa6.11□□□□□ -1.43
SEC24D-214ENST00000514561 MAPK8IP3Q9UPT6 1336 aa6.11□□□□□ -1.43
SEC24D-214ENST00000514561 U2AF1L5P0DN76 240 aaPredicted RBP6.11□□□□□ -1.43
SEC24D-214ENST00000514561 U2AF1Q01081 240 aaKnown RBP eCLIP6.11□□□□□ -1.437e-7■■□□□ 12.4
SEC24D-214ENST00000514561 LMOD2Q6P5Q4 547 aa6.11□□□□□ -1.43
SEC24D-214ENST00000514561 MROH1Q8NDA8 1641 aa6.11□□□□□ -1.43
SEC24D-214ENST00000514561 ABCC5O15440 1437 aa6.11□□□□□ -1.43
SEC24D-214ENST00000514561 DHX29Q7Z478 1369 aaKnown RBP6.11□□□□□ -1.43
SEC24D-214ENST00000514561 ROCK1Q13464 1354 aa6.1□□□□□ -1.43
SEC24D-214ENST00000514561 CFAP70Q5T0N1 1121 aa6.1□□□□□ -1.43
SEC24D-214ENST00000514561 RICTORQ6R327 1708 aa6.1□□□□□ -1.43
SEC24D-214ENST00000514561 IFT172Q9UG01 1749 aa6.1□□□□□ -1.43
SEC24D-214ENST00000514561 MYBBP1AQ9BQG0 1328 aaKnown RBP6.1□□□□□ -1.43
SEC24D-214ENST00000514561 KIAA1210Q9ULL0 1709 aa6.1□□□□□ -1.43
SEC24D-214ENST00000514561 TEX14Q8IWB6 1497 aa6.1□□□□□ -1.43
SEC24D-214ENST00000514561 IQGAP3Q86VI3 1631 aa6.1□□□□□ -1.43
SEC24D-214ENST00000514561 LMTK2Q8IWU2 1503 aa6.1□□□□□ -1.43
SEC24D-214ENST00000514561 FTSJ3Q8IY81 847 aaKnown RBP6.1□□□□□ -1.43
SEC24D-214ENST00000514561 KIF13AQ9H1H9 1805 aa6.09□□□□□ -1.43
SEC24D-214ENST00000514561 RAPGEF3O95398 923 aa6.09□□□□□ -1.43
SEC24D-214ENST00000514561 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.09□□□□□ -1.43
SEC24D-214ENST00000514561 RRAGDQ9NQL2 400 aaPredicted RBP6.09□□□□□ -1.43
SEC24D-214ENST00000514561 CCDC9Q9Y3X0 531 aaKnown RBP6.09□□□□□ -1.43
SEC24D-214ENST00000514561 MROH2AA6NES4 1674 aa6.09□□□□□ -1.43
SEC24D-214ENST00000514561 KIAA1107Q9UPP5 1409 aa6.09□□□□□ -1.43
SEC24D-214ENST00000514561 MS4A1P11836 297 aa6.09□□□□□ -1.43
SEC24D-214ENST00000514561 CLUAP1Q96AJ1 413 aa6.09□□□□□ -1.43
SEC24D-214ENST00000514561 SCAPERQ9BY12 1400 aa6.09□□□□□ -1.43
SEC24D-214ENST00000514561 BCL2L13Q9BXK5 485 aa6.09□□□□□ -1.44
SEC24D-214ENST00000514561 ATP10AO60312 1499 aa6.09□□□□□ -1.44
SEC24D-214ENST00000514561 MKRN3Q13064 507 aaKnown RBP6.08□□□□□ -1.44
SEC24D-214ENST00000514561 MINK1Q8N4C8 1332 aaPredicted RBP6.08□□□□□ -1.44
SEC24D-214ENST00000514561 FAM69CQ0P6D2 419 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms