RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 RNF40O75150 1001 aa7.48□□□□□ -1.21
SMARCAD1-208ENST00000514232 LARP6Q9BRS8 491 aaKnown RBP7.48□□□□□ -1.21
SMARCAD1-208ENST00000514232 TLL1O43897 1013 aa7.47□□□□□ -1.21
SMARCAD1-208ENST00000514232 S1PR4O95977 384 aa7.47□□□□□ -1.21
SMARCAD1-208ENST00000514232 GMPRP36959 345 aa7.47□□□□□ -1.21
SMARCAD1-208ENST00000514232 GSK3AP49840 483 aa7.47□□□□□ -1.21
SMARCAD1-208ENST00000514232 PRSS12P56730 875 aa7.46□□□□□ -1.22
SMARCAD1-208ENST00000514232 EN1Q05925 392 aaPredicted RBP7.46□□□□□ -1.22
SMARCAD1-208ENST00000514232 HS6ST3Q8IZP7 471 aa7.46□□□□□ -1.22
SMARCAD1-208ENST00000514232 NECTIN2Q92692 538 aa7.46□□□□□ -1.22
SMARCAD1-208ENST00000514232 TRIM47Q96LD4 638 aa7.46□□□□□ -1.22
SMARCAD1-208ENST00000514232 BLOC1S3Q6QNY0 202 aa7.45□□□□□ -1.22
SMARCAD1-208ENST00000514232 KCTD17Q8N5Z5 321 aa7.45□□□□□ -1.22
SMARCAD1-208ENST00000514232 PNMA3Q9UL41 463 aa7.45□□□□□ -1.22
SMARCAD1-208ENST00000514232 NBPF26B4DH59 902 aa7.44□□□□□ -1.22
SMARCAD1-208ENST00000514232 FOXC1Q12948 553 aa7.44□□□□□ -1.22
SMARCAD1-208ENST00000514232 ATP13A2Q9NQ11 1180 aa7.44□□□□□ -1.22
SMARCAD1-208ENST00000514232 PKD2Q13563 968 aa7.43□□□□□ -1.22
SMARCAD1-208ENST00000514232 XP32Q5T750 250 aa7.43□□□□□ -1.22
SMARCAD1-208ENST00000514232 PCDHB3Q9Y5E6 796 aa7.42□□□□□ -1.22
SMARCAD1-208ENST00000514232 NKX1-1Q15270 411 aaPredicted RBP7.41□□□□□ -1.22
SMARCAD1-208ENST00000514232 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.22
SMARCAD1-208ENST00000514232 HDGFP51858 240 aaKnown RBP7.4□□□□□ -1.22
SMARCAD1-208ENST00000514232 KCNMA1Q12791 1236 aa7.4□□□□□ -1.22
SMARCAD1-208ENST00000514232 SWT1Q5T5J6 900 aaKnown RBP7.4□□□□□ -1.22
SMARCAD1-208ENST00000514232 SLF2Q8IX21 1173 aa7.4□□□□□ -1.22
SMARCAD1-208ENST00000514232 DDX12PQ92771 950 aa7.4□□□□□ -1.22
SMARCAD1-208ENST00000514232 MAP3K7O43318 606 aa7.39□□□□□ -1.23
SMARCAD1-208ENST00000514232 NUDT18Q6ZVK8 323 aa7.39□□□□□ -1.23
SMARCAD1-208ENST00000514232 SLC16A10Q8TF71 515 aa7.38□□□□□ -1.23
SMARCAD1-208ENST00000514232 SENP2Q9HC62 589 aa7.38□□□□□ -1.23
SMARCAD1-208ENST00000514232 PRR14Q9BWN1 585 aa7.37□□□□□ -1.23
SMARCAD1-208ENST00000514232 KRTAP9-2Q9BYQ4 174 aa7.37□□□□□ -1.23
SMARCAD1-208ENST00000514232 DNAJC5Q9H3Z4 198 aa7.37□□□□□ -1.23
SMARCAD1-208ENST00000514232 CYP4X1Q8N118 509 aa7.36□□□□□ -1.23
SMARCAD1-208ENST00000514232 NBR1Q14596 966 aa7.35□□□□□ -1.23
SMARCAD1-208ENST00000514232 CERKQ8TCT0 537 aa7.35□□□□□ -1.23
SMARCAD1-208ENST00000514232 IRF7Q92985 503 aa7.35□□□□□ -1.23
SMARCAD1-208ENST00000514232 NXF1Q9UBU9 619 aaKnown RBP7.35□□□□□ -1.23
SMARCAD1-208ENST00000514232 DPYSL4O14531 572 aa7.34□□□□□ -1.23
SMARCAD1-208ENST00000514232 ADH1BP00325 375 aa7.34□□□□□ -1.23
SMARCAD1-208ENST00000514232 CAMK2BQ13554 666 aa7.34□□□□□ -1.23
SMARCAD1-208ENST00000514232 KRTAP9-6A0A140TA67 174 aa7.33□□□□□ -1.24
SMARCAD1-208ENST00000514232 NPAS3Q8IXF0 933 aa7.33□□□□□ -1.24
SMARCAD1-208ENST00000514232 KIFC2Q96AC6 838 aa7.33□□□□□ -1.24
SMARCAD1-208ENST00000514232 ERBB4Q15303 1308 aa7.32□□□□□ -1.24
SMARCAD1-208ENST00000514232 RPIAP49247 311 aa7.32□□□□□ -1.24
SMARCAD1-208ENST00000514232 PRIM1P49642 420 aaKnown RBP7.32□□□□□ -1.24
SMARCAD1-208ENST00000514232 RYDENQ9NUL5 291 aaKnown RBP7.32□□□□□ -1.24
SMARCAD1-208ENST00000514232 SMPD1P17405 629 aa7.31□□□□□ -1.24
SMARCAD1-208ENST00000514232 SLC6A16Q9GZN6 736 aa7.31□□□□□ -1.24
SMARCAD1-208ENST00000514232 RBM27Q9P2N5 1060 aaKnown RBP7.31□□□□□ -1.24
SMARCAD1-208ENST00000514232 H3BM21 787 aa7.3□□□□□ -1.24
SMARCAD1-208ENST00000514232 TTC13Q8NBP0 860 aa7.3□□□□□ -1.24
SMARCAD1-208ENST00000514232 TMEM151AQ8N4L1 468 aa7.28□□□□□ -1.24
SMARCAD1-208ENST00000514232 ACTN4O43707 911 aaKnown RBP7.27□□□□□ -1.25
SMARCAD1-208ENST00000514232 VEGFBP49765 207 aa7.26□□□□□ -1.25
SMARCAD1-208ENST00000514232 TTC24A2A3L6 582 aaPredicted RBP7.25□□□□□ -1.25
SMARCAD1-208ENST00000514232 RASSF7Q02833 373 aa7.25□□□□□ -1.25
SMARCAD1-208ENST00000514232 KRTAP1-3Q8IUG1 177 aa7.25□□□□□ -1.25
SMARCAD1-208ENST00000514232 GDF11O95390 407 aa7.24□□□□□ -1.25
SMARCAD1-208ENST00000514232 EYA1Q99502 592 aa7.24□□□□□ -1.25
SMARCAD1-208ENST00000514232 CD2BP2O95400 341 aaKnown RBP7.23□□□□□ -1.25
SMARCAD1-208ENST00000514232 SLC4A3P48751 1232 aa7.23□□□□□ -1.25
SMARCAD1-208ENST00000514232 CDHR5Q9HBB8 845 aa7.23□□□□□ -1.25
SMARCAD1-208ENST00000514232 PDIA6Q15084 440 aa7.22□□□□□ -1.25
SMARCAD1-208ENST00000514232 PSMG3-AS1Q96PY0 264 aa7.22□□□□□ -1.25
SMARCAD1-208ENST00000514232 CHGAP10645 457 aaKnown RBP7.21□□□□□ -1.26
SMARCAD1-208ENST00000514232 SNIP1Q8TAD8 396 aaKnown RBP7.21□□□□□ -1.26
SMARCAD1-208ENST00000514232 J3QL48 77 aa7.2□□□□□ -1.26
SMARCAD1-208ENST00000514232 HPS1Q92902 700 aa7.2□□□□□ -1.26
SMARCAD1-208ENST00000514232 NR1I2O75469 434 aa7.19□□□□□ -1.26
SMARCAD1-208ENST00000514232 CADPS2Q86UW7 1296 aa7.19□□□□□ -1.26
SMARCAD1-208ENST00000514232 WNT7AO00755 349 aa7.18□□□□□ -1.26
SMARCAD1-208ENST00000514232 PADI6Q6TGC4 694 aa7.18□□□□□ -1.26
SMARCAD1-208ENST00000514232 GTPBP6O43824 516 aaPredicted RBP7.17□□□□□ -1.26
SMARCAD1-208ENST00000514232 VSIG8P0DPA2 414 aa7.17□□□□□ -1.26
SMARCAD1-208ENST00000514232 KMT5BQ4FZB7 885 aa7.17□□□□□ -1.26
SMARCAD1-208ENST00000514232 FCF1Q9Y324 198 aaKnown RBP7.17□□□□□ -1.26
SMARCAD1-208ENST00000514232 SCUBE3Q8IX30 993 aa7.16□□□□□ -1.26
SMARCAD1-208ENST00000514232 CFHP08603 1231 aa7.15□□□□□ -1.26
SMARCAD1-208ENST00000514232 SPSB2Q99619 263 aa7.15□□□□□ -1.26
SMARCAD1-208ENST00000514232 NPDC1Q9NQX5 325 aaPredicted RBP7.15□□□□□ -1.26
SMARCAD1-208ENST00000514232 IGHA1P01876 353 aa7.14□□□□□ -1.27
SMARCAD1-208ENST00000514232 GPAT2Q6NUI2 795 aa7.13□□□□□ -1.27
SMARCAD1-208ENST00000514232 TRIM46Q7Z4K8 759 aa7.13□□□□□ -1.27
SMARCAD1-208ENST00000514232 MRGPRX2Q96LB1 330 aa7.13□□□□□ -1.27
SMARCAD1-208ENST00000514232 OSBPP22059 807 aa7.11□□□□□ -1.27
SMARCAD1-208ENST00000514232 DNMT3AQ9Y6K1 912 aaPredicted RBP7.11□□□□□ -1.27
SMARCAD1-208ENST00000514232 SPDYE16A6NNV3 312 aaPredicted RBP7.1□□□□□ -1.27
SMARCAD1-208ENST00000514232 RNF225M0QZC1 329 aaPredicted RBP7.1□□□□□ -1.27
SMARCAD1-208ENST00000514232 SLC10A3P09131 477 aa7.1□□□□□ -1.27
SMARCAD1-208ENST00000514232 TMEM134Q9H6X4 195 aa7.1□□□□□ -1.27
SMARCAD1-208ENST00000514232 BMP1P13497 986 aa7.09□□□□□ -1.27
SMARCAD1-208ENST00000514232 ADAM23O75077 832 aa7.08□□□□□ -1.28
SMARCAD1-208ENST00000514232 DNAJB2P25686 324 aa7.08□□□□□ -1.28
SMARCAD1-208ENST00000514232 FAM160A2Q8N612 972 aaPredicted RBP7.07□□□□□ -1.28
SMARCAD1-208ENST00000514232 THAP11Q96EK4 314 aa7.07□□□□□ -1.28
SMARCAD1-208ENST00000514232 GRXCR2A6NFK2 248 aa7.06□□□□□ -1.28
SMARCAD1-208ENST00000514232 PUS10Q3MIT2 529 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms