RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 AFF2P51816 1311 aa13.56□□□□□ -0.24
CAST-240ENST00000514055 DUOX2Q9NRD8 1548 aa13.55□□□□□ -0.24
CAST-240ENST00000514055 KDM5AP29375 1690 aaKnown RBP13.55□□□□□ -0.24
CAST-240ENST00000514055 RGS12O14924 1447 aa13.55□□□□□ -0.24
CAST-240ENST00000514055 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
CAST-240ENST00000514055 RRP7BPQ9NSQ0 103 aa13.54□□□□□ -0.24
CAST-240ENST00000514055 KIF15Q9NS87 1388 aa13.54□□□□□ -0.24
CAST-240ENST00000514055 AHDC1Q5TGY3 1603 aaPredicted RBP13.53□□□□□ -0.24
CAST-240ENST00000514055 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
CAST-240ENST00000514055 C14orf37Q86TY3 774 aa13.53□□□□□ -0.24
CAST-240ENST00000514055 KANK4Q5T7N3 995 aaPredicted RBP13.52□□□□□ -0.25
CAST-240ENST00000514055 ADGRB3O60242 1522 aa13.52□□□□□ -0.25
CAST-240ENST00000514055 DIP2AQ14689 1571 aa13.52□□□□□ -0.25
CAST-240ENST00000514055 NUTM2DQ5VT03 806 aaPredicted RBP13.51□□□□□ -0.25
CAST-240ENST00000514055 CHD2O14647 1828 aaKnown RBP13.5□□□□□ -0.25
CAST-240ENST00000514055 BRINP3Q76B58 766 aa13.5□□□□□ -0.25
CAST-240ENST00000514055 QTRT2Q9H974 415 aaKnown RBP13.5□□□□□ -0.25
CAST-240ENST00000514055 ZFYVE9O95405 1425 aa13.49□□□□□ -0.25
CAST-240ENST00000514055 NOS1P29475 1434 aa13.49□□□□□ -0.25
CAST-240ENST00000514055 ERBINQ96RT1 1412 aa13.49□□□□□ -0.25
CAST-240ENST00000514055 C8orf37Q96NL8 207 aa13.49□□□□□ -0.25
CAST-240ENST00000514055 PLEKHG1Q9ULL1 1385 aa13.48□□□□□ -0.25
CAST-240ENST00000514055 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.48□□□□□ -0.25
CAST-240ENST00000514055 ATF3P18847 181 aa13.48□□□□□ -0.25
CAST-240ENST00000514055 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
CAST-240ENST00000514055 SETBP1Q9Y6X0 1596 aa13.48□□□□□ -0.25
CAST-240ENST00000514055 MYOM3Q5VTT5 1437 aa13.47□□□□□ -0.25
CAST-240ENST00000514055 KANK1Q14678 1352 aa13.47□□□□□ -0.25
CAST-240ENST00000514055 PPP1R15AO75807 674 aaPredicted RBP13.47□□□□□ -0.25
CAST-240ENST00000514055 RBM6P78332 1123 aaKnown RBP13.47□□□□□ -0.25
CAST-240ENST00000514055 C19orf44Q9H6X5 657 aa13.47□□□□□ -0.25
CAST-240ENST00000514055 LMTK2Q8IWU2 1503 aa13.47□□□□□ -0.25
CAST-240ENST00000514055 ABCC5O15440 1437 aa13.47□□□□□ -0.25
CAST-240ENST00000514055 RIMS2Q9UQ26 1411 aa13.47□□□□□ -0.25
CAST-240ENST00000514055 DDX17Q92841 729 aaKnown RBP13.46□□□□□ -0.25
CAST-240ENST00000514055 TBX22Q9Y458 520 aa13.46□□□□□ -0.25
CAST-240ENST00000514055 NCOA3Q9Y6Q9 1424 aa13.46□□□□□ -0.26
CAST-240ENST00000514055 ADAMTS13Q76LX8 1427 aa13.45□□□□□ -0.26
CAST-240ENST00000514055 MYO5BQ9ULV0 1848 aa13.44□□□□□ -0.26
CAST-240ENST00000514055 SLC52A1Q9NWF4 448 aa13.44□□□□□ -0.26
CAST-240ENST00000514055 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
CAST-240ENST00000514055 ZRANB1Q9UGI0 708 aa13.43□□□□□ -0.26
CAST-240ENST00000514055 CHIC2Q9UKJ5 165 aa13.43□□□□□ -0.26
CAST-240ENST00000514055 ASXL1Q8IXJ9 1541 aa13.43□□□□□ -0.26
CAST-240ENST00000514055 PTPRUQ92729 1446 aa13.42□□□□□ -0.26
CAST-240ENST00000514055 ADAMTS2O95450 1211 aa13.42□□□□□ -0.26
CAST-240ENST00000514055 AMOTL2Q9Y2J4 779 aa13.41□□□□□ -0.26
CAST-240ENST00000514055 ATAD2Q6PL18 1390 aa13.41□□□□□ -0.26
CAST-240ENST00000514055 PNPLA6Q8IY17 1366 aa13.41□□□□□ -0.26
CAST-240ENST00000514055 CROCC2H7BZ55 1655 aa13.4□□□□□ -0.26
CAST-240ENST00000514055 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
CAST-240ENST00000514055 DAPK1P53355 1430 aa13.39□□□□□ -0.27
CAST-240ENST00000514055 MST1RQ04912 1400 aa13.39□□□□□ -0.27
CAST-240ENST00000514055 PTPN23Q9H3S7 1636 aa13.39□□□□□ -0.27
CAST-240ENST00000514055 LRRC59Q96AG4 307 aaKnown RBP13.39□□□□□ -0.27
CAST-240ENST00000514055 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
CAST-240ENST00000514055 GCC2Q8IWJ2 1684 aa13.39□□□□□ -0.27
CAST-240ENST00000514055 TMEM131LA2VDJ0 1609 aa13.39□□□□□ -0.27
CAST-240ENST00000514055 HDGFP51858 240 aaKnown RBP13.37□□□□□ -0.27
CAST-240ENST00000514055 PPARGC1BQ86YN6 1023 aaKnown RBP13.37□□□□□ -0.27
CAST-240ENST00000514055 NHSL1Q5SYE7 1610 aa13.37□□□□□ -0.27
CAST-240ENST00000514055 EP400Q96L91 3159 aa13.37□□□□□ -0.27
CAST-240ENST00000514055 USP21Q9UK80 565 aa13.36□□□□□ -0.27
CAST-240ENST00000514055 PIK3R4Q99570 1358 aa13.35□□□□□ -0.27
CAST-240ENST00000514055 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.35□□□□□ -0.27
CAST-240ENST00000514055 ANKRD30AQ9BXX3 1397 aa13.34□□□□□ -0.27
CAST-240ENST00000514055 DCCP43146 1447 aa13.34□□□□□ -0.27
CAST-240ENST00000514055 TRPC5Q9UL62 973 aaPredicted RBP13.33□□□□□ -0.28
CAST-240ENST00000514055 TRPM2O94759 1503 aa13.33□□□□□ -0.28
CAST-240ENST00000514055 RPRD2Q5VT52 1461 aaKnown RBP13.32□□□□□ -0.28
CAST-240ENST00000514055 ATRNO75882 1429 aa13.31□□□□□ -0.28
CAST-240ENST00000514055 FOXD1Q16676 465 aa13.31□□□□□ -0.28
CAST-240ENST00000514055 FNBP4Q8N3X1 1017 aaPredicted RBP13.3□□□□□ -0.28
CAST-240ENST00000514055 XRN1Q8IZH2 1706 aaKnown RBP13.3□□□□□ -0.28
CAST-240ENST00000514055 UNC13BO14795 1591 aa13.29□□□□□ -0.28
CAST-240ENST00000514055 DEFB132Q7Z7B7 95 aa13.29□□□□□ -0.28
CAST-240ENST00000514055 METP08581 1390 aa13.29□□□□□ -0.28
CAST-240ENST00000514055 NRXN3Q9Y4C0 1643 aa13.28□□□□□ -0.28
CAST-240ENST00000514055 ORAI2Q96SN7 254 aa13.28□□□□□ -0.28
CAST-240ENST00000514055 ADGRL3Q9HAR2 1447 aa13.28□□□□□ -0.28
CAST-240ENST00000514055 FAM50AQ14320 339 aaKnown RBP13.27□□□□□ -0.29
CAST-240ENST00000514055 CCDC125Q86Z20 511 aa13.27□□□□□ -0.29
CAST-240ENST00000514055 C1orf167Q5SNV9 1468 aa13.27□□□□□ -0.29
CAST-240ENST00000514055 SOS2Q07890 1332 aaPredicted RBP13.26□□□□□ -0.29
CAST-240ENST00000514055 BCL9LQ86UU0 1499 aa13.26□□□□□ -0.29
CAST-240ENST00000514055 ANKRD50Q9ULJ7 1429 aa13.26□□□□□ -0.29
CAST-240ENST00000514055 ADGRL2O95490 1459 aa13.25□□□□□ -0.29
CAST-240ENST00000514055 PTCH1Q13635 1447 aa13.25□□□□□ -0.29
CAST-240ENST00000514055 NALCNQ8IZF0 1738 aa13.25□□□□□ -0.29
CAST-240ENST00000514055 RRBP1Q9P2E9 1410 aaKnown RBP13.24□□□□□ -0.29
CAST-240ENST00000514055 E9PCH4 1651 aa13.24□□□□□ -0.29
CAST-240ENST00000514055 GJD4Q96KN9 370 aaPredicted RBP13.23□□□□□ -0.29
CAST-240ENST00000514055 BLMP54132 1417 aaPredicted RBP13.22□□□□□ -0.29
CAST-240ENST00000514055 PSDA5PKW4 1024 aaPredicted RBP13.22□□□□□ -0.29
CAST-240ENST00000514055 MYOM2P54296 1465 aa13.21□□□□□ -0.3
CAST-240ENST00000514055 LRP5O75197 1615 aa13.21□□□□□ -0.3
CAST-240ENST00000514055 LAMC1P11047 1609 aa13.21□□□□□ -0.3
CAST-240ENST00000514055 XPCQ01831 940 aaPredicted RBP13.19□□□□□ -0.3
CAST-240ENST00000514055 COL22A1Q8NFW1 1626 aaPredicted RBP13.19□□□□□ -0.3
CAST-240ENST00000514055 GLI3P10071 1580 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms