RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 SLC10A3P09131 477 aa8.26□□□□□ -1.09
PROM1-216ENST00000513946 METTL3Q86U44 580 aaKnown RBP8.26□□□□□ -1.09
PROM1-216ENST00000513946 MTRQ99707 1265 aa8.26□□□□□ -1.09
PROM1-216ENST00000513946 RNF40O75150 1001 aa8.25□□□□□ -1.09
PROM1-216ENST00000513946 GPIHBP1Q8IV16 184 aa8.24□□□□□ -1.09
PROM1-216ENST00000513946 PHOX2BQ99453 314 aa8.24□□□□□ -1.09
PROM1-216ENST00000513946 IL21Q9HBE4 155 aa8.24□□□□□ -1.09
PROM1-216ENST00000513946 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.23□□□□□ -1.09
PROM1-216ENST00000513946 NECTIN2Q92692 538 aa8.23□□□□□ -1.09
PROM1-216ENST00000513946 NKX2-3Q8TAU0 364 aa8.21□□□□□ -1.1
PROM1-216ENST00000513946 DAXXQ9UER7 740 aaPredicted RBP8.2□□□□□ -1.1
PROM1-216ENST00000513946 ACTN4O43707 911 aaKnown RBP8.19□□□□□ -1.1
PROM1-216ENST00000513946 SLC4A3P48751 1232 aa8.19□□□□□ -1.1
PROM1-216ENST00000513946 NLRP7Q8WX94 980 aa8.19□□□□□ -1.1
PROM1-216ENST00000513946 ZPR1O75312 459 aa8.18□□□□□ -1.1
PROM1-216ENST00000513946 COPS2P61201 443 aa8.18□□□□□ -1.1
PROM1-216ENST00000513946 IRF6O14896 467 aa8.17□□□□□ -1.1
PROM1-216ENST00000513946 PPP1R18Q6NYC8 613 aa8.17□□□□□ -1.1
PROM1-216ENST00000513946 BLOC1S3Q6QNY0 202 aa8.17□□□□□ -1.1
PROM1-216ENST00000513946 PRR14Q9BWN1 585 aa8.17□□□□□ -1.1
PROM1-216ENST00000513946 PCDHB3Q9Y5E6 796 aa8.17□□□□□ -1.1
PROM1-216ENST00000513946 MAP2K5Q13163 448 aa8.16□□□□□ -1.1
PROM1-216ENST00000513946 CFHP08603 1231 aa8.15□□□□□ -1.1
PROM1-216ENST00000513946 KMT5BQ4FZB7 885 aa8.15□□□□□ -1.1
PROM1-216ENST00000513946 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.15□□□□□ -1.1
PROM1-216ENST00000513946 MINK1Q8N4C8 1332 aaPredicted RBP8.14□□□□□ -1.11
PROM1-216ENST00000513946 TULP1O00294 542 aaPredicted RBP8.13□□□□□ -1.11
PROM1-216ENST00000513946 LMOD2Q6P5Q4 547 aa8.12□□□□□ -1.11
PROM1-216ENST00000513946 DDX11L8A8MPP1 907 aa8.11□□□□□ -1.11
PROM1-216ENST00000513946 GCGRP47871 477 aa8.11□□□□□ -1.11
PROM1-216ENST00000513946 SCUBE3Q8IX30 993 aa8.11□□□□□ -1.11
PROM1-216ENST00000513946 PUS10Q3MIT2 529 aaKnown RBP8.1□□□□□ -1.11
PROM1-216ENST00000513946 RSPH4AQ5TD94 716 aa8.1□□□□□ -1.11
PROM1-216ENST00000513946 TMUB1Q9BVT8 246 aa8.1□□□□□ -1.11
PROM1-216ENST00000513946 ZMYND10O75800 440 aa8.09□□□□□ -1.11
PROM1-216ENST00000513946 TLL1O43897 1013 aa8.08□□□□□ -1.12
PROM1-216ENST00000513946 CD46P15529 392 aa8.08□□□□□ -1.12
PROM1-216ENST00000513946 MORN1Q5T089 497 aa8.08□□□□□ -1.12
PROM1-216ENST00000513946 BARGINQ6ZT62 677 aa8.08□□□□□ -1.12
PROM1-216ENST00000513946 RDH13Q8NBN7 331 aa8.08□□□□□ -1.12
PROM1-216ENST00000513946 ZC3H15Q8WU90 426 aaKnown RBP8.08□□□□□ -1.12
PROM1-216ENST00000513946 CCDC102AQ96A19 550 aa8.08□□□□□ -1.12
PROM1-216ENST00000513946 EMID1Q96A84 441 aaPredicted RBP8.08□□□□□ -1.12
PROM1-216ENST00000513946 RNF223E7ERA6 249 aa8.07□□□□□ -1.12
PROM1-216ENST00000513946 NR1I2O75469 434 aa8.07□□□□□ -1.12
PROM1-216ENST00000513946 FUT2Q10981 343 aa8.07□□□□□ -1.12
PROM1-216ENST00000513946 SULF1Q8IWU6 871 aa8.07□□□□□ -1.12
PROM1-216ENST00000513946 IRX2Q9BZI1 471 aaPredicted RBP8.07□□□□□ -1.12
PROM1-216ENST00000513946 PRKD2Q9BZL6 878 aa8.07□□□□□ -1.12
PROM1-216ENST00000513946 ATP6V1AP38606 617 aa8.06□□□□□ -1.12
PROM1-216ENST00000513946 THAP11Q96EK4 314 aa8.06□□□□□ -1.12
PROM1-216ENST00000513946 REPIN1Q9BWE0 567 aaKnown RBP8.06□□□□□ -1.12
PROM1-216ENST00000513946 V9GY48 417 aaPredicted RBP8.06□□□□□ -1.12
PROM1-216ENST00000513946 ADH1BP00325 375 aa8.05□□□□□ -1.12
PROM1-216ENST00000513946 MDM2Q00987 491 aaPredicted RBP8.05□□□□□ -1.12
PROM1-216ENST00000513946 PPEF1O14829 653 aaPredicted RBP8.04□□□□□ -1.12
PROM1-216ENST00000513946 SLC27A5Q9Y2P5 690 aa8.04□□□□□ -1.12
PROM1-216ENST00000513946 S1PR4O95977 384 aa8.03□□□□□ -1.12
PROM1-216ENST00000513946 GGCXP38435 758 aa8.03□□□□□ -1.12
PROM1-216ENST00000513946 FAM160A2Q8N612 972 aaPredicted RBP8.02□□□□□ -1.13
PROM1-216ENST00000513946 SPSB2Q99619 263 aa8.02□□□□□ -1.13
PROM1-216ENST00000513946 FAM217BQ9NTX9 383 aaPredicted RBP8.02□□□□□ -1.13
PROM1-216ENST00000513946 SALL2Q9Y467 1007 aaPredicted RBP8.02□□□□□ -1.13
PROM1-216ENST00000513946 BRICD5Q6PL45 260 aa8.01□□□□□ -1.13
PROM1-216ENST00000513946 ANKLE1Q8NAG6 615 aa8.01□□□□□ -1.13
PROM1-216ENST00000513946 SLC6A16Q9GZN6 736 aa8.01□□□□□ -1.13
PROM1-216ENST00000513946 LIAT1Q6ZQX7 453 aa8□□□□□ -1.13
PROM1-216ENST00000513946 KRI1Q8N9T8 703 aaKnown RBP8□□□□□ -1.13
PROM1-216ENST00000513946 GPCPD1Q9NPB8 672 aa8□□□□□ -1.13
PROM1-216ENST00000513946 CLCN1P35523 988 aa7.99□□□□□ -1.13
PROM1-216ENST00000513946 PLA2G2CQ5R387 149 aa7.99□□□□□ -1.13
PROM1-216ENST00000513946 KDM4AO75164 1064 aa7.98□□□□□ -1.13
PROM1-216ENST00000513946 SLC19A1P41440 591 aa7.98□□□□□ -1.13
PROM1-216ENST00000513946 FMNL1O95466 1100 aaPredicted RBP7.97□□□□□ -1.13
PROM1-216ENST00000513946 AMHR2Q16671 573 aa7.97□□□□□ -1.13
PROM1-216ENST00000513946 SPRYD7Q5W111 196 aa7.97□□□□□ -1.13
PROM1-216ENST00000513946 RNF19BQ6ZMZ0 732 aa7.97□□□□□ -1.13
PROM1-216ENST00000513946 TRIM67Q6ZTA4 783 aa7.97□□□□□ -1.13
PROM1-216ENST00000513946 LCE2BO14633 110 aa7.96□□□□□ -1.14
PROM1-216ENST00000513946 GFRA3O60609 400 aa7.96□□□□□ -1.14
PROM1-216ENST00000513946 SSTR3P32745 418 aaPredicted RBP7.96□□□□□ -1.14
PROM1-216ENST00000513946 GRIPAP1Q4V328 841 aa7.96□□□□□ -1.14
PROM1-216ENST00000513946 HLA-CQ95604 372 aa7.96□□□□□ -1.14
PROM1-216ENST00000513946 TRIM66O15016 1216 aa7.94□□□□□ -1.14
PROM1-216ENST00000513946 HOXA2O43364 376 aa7.94□□□□□ -1.14
PROM1-216ENST00000513946 USP46P62068 366 aa7.94□□□□□ -1.14
PROM1-216ENST00000513946 LAPTM4AQ15012 233 aa7.94□□□□□ -1.14
PROM1-216ENST00000513946 ZNF598Q86UK7 904 aaKnown RBP7.94□□□□□ -1.14
PROM1-216ENST00000513946 MSS51Q4VC12 460 aa7.93□□□□□ -1.14
PROM1-216ENST00000513946 NRG2O14511 850 aaPredicted RBP7.92□□□□□ -1.14
PROM1-216ENST00000513946 PRDM9Q9NQV7 894 aa7.92□□□□□ -1.14
PROM1-216ENST00000513946 GDF9O60383 454 aa7.91□□□□□ -1.14
PROM1-216ENST00000513946 MMP16P51512 607 aa7.91□□□□□ -1.14
PROM1-216ENST00000513946 GUCA2AQ02747 115 aa7.91□□□□□ -1.14
PROM1-216ENST00000513946 SPIRE2Q8WWL2 714 aa7.91□□□□□ -1.14
PROM1-216ENST00000513946 AK7Q96M32 723 aa7.91□□□□□ -1.14
PROM1-216ENST00000513946 Q3C1V9 767 aa7.9□□□□□ -1.14
PROM1-216ENST00000513946 GIGYF2Q6Y7W6 1299 aaKnown RBP7.9□□□□□ -1.14
PROM1-216ENST00000513946 Q6ZNB5 142 aa7.9□□□□□ -1.14
PROM1-216ENST00000513946 PCDHGC3Q9UN70 934 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms