RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 COL16A1Q07092 1604 aaPredicted RBP17.25■□□□□ 0.35
NFKB1-211ENST00000513803 NCOA3Q9Y6Q9 1424 aa17.24■□□□□ 0.35
NFKB1-211ENST00000513803 NUTM2BA6NNL0 878 aaPredicted RBP17.24■□□□□ 0.35
NFKB1-211ENST00000513803 NUTM2EB1AL46 878 aaPredicted RBP17.24■□□□□ 0.35
NFKB1-211ENST00000513803 ATF3P18847 181 aa17.24■□□□□ 0.35
NFKB1-211ENST00000513803 NUTM2AQ8IVF1 878 aaPredicted RBP17.24■□□□□ 0.35
NFKB1-211ENST00000513803 KDM5AP29375 1690 aaKnown RBP17.23■□□□□ 0.35
NFKB1-211ENST00000513803 FOXD1Q16676 465 aa17.23■□□□□ 0.35
NFKB1-211ENST00000513803 C19orf44Q9H6X5 657 aa17.23■□□□□ 0.35
NFKB1-211ENST00000513803 KIF15Q9NS87 1388 aa17.23■□□□□ 0.35
NFKB1-211ENST00000513803 NWD1Q149M9 1564 aa17.23■□□□□ 0.35
NFKB1-211ENST00000513803 MYOM3Q5VTT5 1437 aa17.22■□□□□ 0.35
NFKB1-211ENST00000513803 ERBINQ96RT1 1412 aa17.21■□□□□ 0.35
NFKB1-211ENST00000513803 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
NFKB1-211ENST00000513803 TBX22Q9Y458 520 aa17.21■□□□□ 0.35
NFKB1-211ENST00000513803 AFF2P51816 1311 aa17.21■□□□□ 0.34
NFKB1-211ENST00000513803 RBM6P78332 1123 aaKnown RBP17.19■□□□□ 0.34
NFKB1-211ENST00000513803 QTRT2Q9H974 415 aaKnown RBP17.19■□□□□ 0.34
NFKB1-211ENST00000513803 PLEKHG1Q9ULL1 1385 aa17.18■□□□□ 0.34
NFKB1-211ENST00000513803 NUTM2DQ5VT03 806 aaPredicted RBP17.18■□□□□ 0.34
NFKB1-211ENST00000513803 NOS1P29475 1434 aa17.16■□□□□ 0.34
NFKB1-211ENST00000513803 ZRANB1Q9UGI0 708 aa17.16■□□□□ 0.34
NFKB1-211ENST00000513803 AHDC1Q5TGY3 1603 aaPredicted RBP17.16■□□□□ 0.34
NFKB1-211ENST00000513803 BRINP3Q76B58 766 aa17.15■□□□□ 0.34
NFKB1-211ENST00000513803 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.15■□□□□ 0.34
NFKB1-211ENST00000513803 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
NFKB1-211ENST00000513803 LRRC59Q96AG4 307 aaKnown RBP17.14■□□□□ 0.33
NFKB1-211ENST00000513803 NGLY1Q96IV0 654 aa17.14■□□□□ 0.33
NFKB1-211ENST00000513803 ADGRB3O60242 1522 aa17.14■□□□□ 0.33
NFKB1-211ENST00000513803 LMTK2Q8IWU2 1503 aa17.14■□□□□ 0.33
NFKB1-211ENST00000513803 CHD2O14647 1828 aaKnown RBP17.14■□□□□ 0.33
NFKB1-211ENST00000513803 C8orf37Q96NL8 207 aa17.13■□□□□ 0.33
NFKB1-211ENST00000513803 RIMS2Q9UQ26 1411 aa17.12■□□□□ 0.33
NFKB1-211ENST00000513803 ABCC5O15440 1437 aa17.11■□□□□ 0.33
NFKB1-211ENST00000513803 ZFYVE9O95405 1425 aa17.11■□□□□ 0.33
NFKB1-211ENST00000513803 KANK4Q5T7N3 995 aaPredicted RBP17.1■□□□□ 0.33
NFKB1-211ENST00000513803 PIK3R4Q99570 1358 aa17.1■□□□□ 0.33
NFKB1-211ENST00000513803 RGS12O14924 1447 aa17.1■□□□□ 0.33
NFKB1-211ENST00000513803 ATAD2Q6PL18 1390 aa17.09■□□□□ 0.33
NFKB1-211ENST00000513803 SETD5Q9C0A6 1442 aa17.09■□□□□ 0.33
NFKB1-211ENST00000513803 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.08■□□□□ 0.32
NFKB1-211ENST00000513803 ANKRD30AQ9BXX3 1397 aa17.08■□□□□ 0.32
NFKB1-211ENST00000513803 AMOTL2Q9Y2J4 779 aa17.08■□□□□ 0.32
NFKB1-211ENST00000513803 CHGAP10645 457 aaKnown RBP17.07■□□□□ 0.32
NFKB1-211ENST00000513803 CHIC2Q9UKJ5 165 aa17.07■□□□□ 0.32
NFKB1-211ENST00000513803 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
NFKB1-211ENST00000513803 CCDC125Q86Z20 511 aa17.05■□□□□ 0.32
NFKB1-211ENST00000513803 RPRD2Q5VT52 1461 aaKnown RBP17.05■□□□□ 0.32
NFKB1-211ENST00000513803 DCCP43146 1447 aa17.04■□□□□ 0.32
NFKB1-211ENST00000513803 ADAMTS13Q76LX8 1427 aa17.04■□□□□ 0.32
NFKB1-211ENST00000513803 ADAMTS2O95450 1211 aa17.03■□□□□ 0.32
NFKB1-211ENST00000513803 DAPK1P53355 1430 aa17.03■□□□□ 0.32
NFKB1-211ENST00000513803 TRPC5Q9UL62 973 aaPredicted RBP17.01■□□□□ 0.31
NFKB1-211ENST00000513803 PNPLA6Q8IY17 1366 aa17.01■□□□□ 0.31
NFKB1-211ENST00000513803 ASXL1Q8IXJ9 1541 aa17.01■□□□□ 0.31
NFKB1-211ENST00000513803 VPS8Q8N3P4 1428 aa17■□□□□ 0.31
NFKB1-211ENST00000513803 USP21Q9UK80 565 aa17■□□□□ 0.31
NFKB1-211ENST00000513803 TMEM131LA2VDJ0 1609 aa16.98■□□□□ 0.31
NFKB1-211ENST00000513803 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
NFKB1-211ENST00000513803 MST1RQ04912 1400 aa16.97■□□□□ 0.31
NFKB1-211ENST00000513803 DDX17Q92841 729 aaKnown RBP16.97■□□□□ 0.31
NFKB1-211ENST00000513803 FNBP4Q8N3X1 1017 aaPredicted RBP16.96■□□□□ 0.31
NFKB1-211ENST00000513803 MYO5BQ9ULV0 1848 aa16.96■□□□□ 0.3
NFKB1-211ENST00000513803 PTPN23Q9H3S7 1636 aa16.96■□□□□ 0.3
NFKB1-211ENST00000513803 TRPM2O94759 1503 aa16.96■□□□□ 0.3
NFKB1-211ENST00000513803 PTPRUQ92729 1446 aa16.96■□□□□ 0.3
NFKB1-211ENST00000513803 GCC2Q8IWJ2 1684 aa16.94■□□□□ 0.3
NFKB1-211ENST00000513803 SETBP1Q9Y6X0 1596 aa16.94■□□□□ 0.3
NFKB1-211ENST00000513803 APLP2Q06481 763 aa16.94■□□□□ 0.3
NFKB1-211ENST00000513803 EP400Q96L91 3159 aa16.93■□□□□ 0.3
NFKB1-211ENST00000513803 NHSL1Q5SYE7 1610 aa16.92■□□□□ 0.3
NFKB1-211ENST00000513803 ANKRD50Q9ULJ7 1429 aa16.92■□□□□ 0.3
NFKB1-211ENST00000513803 PTCH1Q13635 1447 aa16.89■□□□□ 0.29
NFKB1-211ENST00000513803 SOS2Q07890 1332 aaPredicted RBP16.89■□□□□ 0.29
NFKB1-211ENST00000513803 ATRNO75882 1429 aa16.88■□□□□ 0.29
NFKB1-211ENST00000513803 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
NFKB1-211ENST00000513803 ADGRL2O95490 1459 aa16.86■□□□□ 0.29
NFKB1-211ENST00000513803 GJD4Q96KN9 370 aaPredicted RBP16.86■□□□□ 0.29
NFKB1-211ENST00000513803 ORAI2Q96SN7 254 aa16.85■□□□□ 0.29
NFKB1-211ENST00000513803 METP08581 1390 aa16.85■□□□□ 0.29
NFKB1-211ENST00000513803 C1orf167Q5SNV9 1468 aa16.85■□□□□ 0.29
NFKB1-211ENST00000513803 SF3B2Q13435 895 aaKnown RBP16.84■□□□□ 0.29
NFKB1-211ENST00000513803 ZNF326Q5BKZ1 582 aaKnown RBP16.84■□□□□ 0.29
NFKB1-211ENST00000513803 UNC13BO14795 1591 aa16.84■□□□□ 0.29
NFKB1-211ENST00000513803 BLMP54132 1417 aaPredicted RBP16.83■□□□□ 0.28
NFKB1-211ENST00000513803 FAM50AQ14320 339 aaKnown RBP16.83■□□□□ 0.28
NFKB1-211ENST00000513803 XRN1Q8IZH2 1706 aaKnown RBP16.82■□□□□ 0.28
NFKB1-211ENST00000513803 BCL9LQ86UU0 1499 aa16.8■□□□□ 0.28
NFKB1-211ENST00000513803 DEFB132Q7Z7B7 95 aa16.8■□□□□ 0.28
NFKB1-211ENST00000513803 NPHP3Q7Z494 1330 aa16.77■□□□□ 0.28
NFKB1-211ENST00000513803 LOC105371045A0A1W2PR82 267 aa16.77■□□□□ 0.28
NFKB1-211ENST00000513803 UNC5CLQ8IV45 518 aa16.77■□□□□ 0.28
NFKB1-211ENST00000513803 E9PCH4 1651 aa16.77■□□□□ 0.28
NFKB1-211ENST00000513803 LAMC1P11047 1609 aa16.77■□□□□ 0.27
NFKB1-211ENST00000513803 NRXN3Q9Y4C0 1643 aa16.76■□□□□ 0.27
NFKB1-211ENST00000513803 NUP155O75694 1391 aa16.76■□□□□ 0.27
NFKB1-211ENST00000513803 ESCO1Q5FWF5 840 aa16.75■□□□□ 0.27
NFKB1-211ENST00000513803 MYOM2P54296 1465 aa16.74■□□□□ 0.27
NFKB1-211ENST00000513803 NALCNQ8IZF0 1738 aa16.73■□□□□ 0.27
NFKB1-211ENST00000513803 COL22A1Q8NFW1 1626 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms