RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 IFFO2Q5TF58 517 aa19.5■□□□□ 0.71
SFXN1-210ENST00000513725 RSPH4AQ5TD94 716 aa19.49■□□□□ 0.71
SFXN1-210ENST00000513725 BCANQ96GW7 911 aa19.49■□□□□ 0.71
SFXN1-210ENST00000513725 NCOA3Q9Y6Q9 1424 aa19.49■□□□□ 0.71
SFXN1-210ENST00000513725 FYCO1Q9BQS8 1478 aa19.48■□□□□ 0.71
SFXN1-210ENST00000513725 ATF3P18847 181 aa19.48■□□□□ 0.71
SFXN1-210ENST00000513725 PIK3C2BO00750 1634 aa19.47■□□□□ 0.71
SFXN1-210ENST00000513725 EFCAB6Q5THR3 1501 aa19.45■□□□□ 0.7
SFXN1-210ENST00000513725 SETD5Q9C0A6 1442 aa19.44■□□□□ 0.7
SFXN1-210ENST00000513725 CEP152O94986 1710 aa19.43■□□□□ 0.7
SFXN1-210ENST00000513725 BRINP3Q76B58 766 aa19.43■□□□□ 0.7
SFXN1-210ENST00000513725 LRRC59Q96AG4 307 aaKnown RBP19.43■□□□□ 0.7
SFXN1-210ENST00000513725 C19orf44Q9H6X5 657 aa19.43■□□□□ 0.7
SFXN1-210ENST00000513725 TRPC5Q9UL62 973 aaPredicted RBP19.43■□□□□ 0.7
SFXN1-210ENST00000513725 TSPY4P0CV99 314 aa19.42■□□□□ 0.7
SFXN1-210ENST00000513725 TSPY10P0CW01 314 aa19.42■□□□□ 0.7
SFXN1-210ENST00000513725 YY1P25490 414 aa19.42■□□□□ 0.7
SFXN1-210ENST00000513725 MTUS2Q5JR59 1369 aa19.42■□□□□ 0.7
SFXN1-210ENST00000513725 USP21Q9UK80 565 aa19.41■□□□□ 0.7
SFXN1-210ENST00000513725 ARHGAP31Q2M1Z3 1444 aa19.41■□□□□ 0.7
SFXN1-210ENST00000513725 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.4■□□□□ 0.7
SFXN1-210ENST00000513725 CHD2O14647 1828 aaKnown RBP19.4■□□□□ 0.7
SFXN1-210ENST00000513725 MAST1Q9Y2H9 1570 aa19.39■□□□□ 0.69
SFXN1-210ENST00000513725 EIF2AK4Q9P2K8 1649 aaKnown RBP19.39■□□□□ 0.69
SFXN1-210ENST00000513725 ADAMTS2O95450 1211 aa19.38■□□□□ 0.69
SFXN1-210ENST00000513725 MROH1Q8NDA8 1641 aa19.37■□□□□ 0.69
SFXN1-210ENST00000513725 BLMP54132 1417 aaPredicted RBP19.37■□□□□ 0.69
SFXN1-210ENST00000513725 NHSL1Q5SYE7 1610 aa19.36■□□□□ 0.69
SFXN1-210ENST00000513725 PNPLA6Q8IY17 1366 aa19.35■□□□□ 0.69
SFXN1-210ENST00000513725 IDI1Q13907 227 aa19.35■□□□□ 0.69
SFXN1-210ENST00000513725 ASXL1Q8IXJ9 1541 aa19.34■□□□□ 0.69
SFXN1-210ENST00000513725 SF3B2Q13435 895 aaKnown RBP19.33■□□□□ 0.68
SFXN1-210ENST00000513725 DEFB132Q7Z7B7 95 aa19.33■□□□□ 0.68
SFXN1-210ENST00000513725 ATRNO75882 1429 aa19.32■□□□□ 0.68
SFXN1-210ENST00000513725 HRCP23327 699 aa19.31■□□□□ 0.68
SFXN1-210ENST00000513725 FNBP4Q8N3X1 1017 aaPredicted RBP19.3■□□□□ 0.68
SFXN1-210ENST00000513725 ARHGEF5Q12774 1597 aa19.3■□□□□ 0.68
SFXN1-210ENST00000513725 PLEKHG1Q9ULL1 1385 aa19.29■□□□□ 0.68
SFXN1-210ENST00000513725 PSDA5PKW4 1024 aaPredicted RBP19.28■□□□□ 0.68
SFXN1-210ENST00000513725 TBX22Q9Y458 520 aa19.28■□□□□ 0.68
SFXN1-210ENST00000513725 PPP1R15AO75807 674 aaPredicted RBP19.27■□□□□ 0.68
SFXN1-210ENST00000513725 ADGRB3O60242 1522 aa19.26■□□□□ 0.67
SFXN1-210ENST00000513725 HDGFP51858 240 aaKnown RBP19.26■□□□□ 0.67
SFXN1-210ENST00000513725 DCCP43146 1447 aa19.25■□□□□ 0.67
SFXN1-210ENST00000513725 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
SFXN1-210ENST00000513725 EHBP1L1Q8N3D4 1523 aa19.25■□□□□ 0.67
SFXN1-210ENST00000513725 PTCH1Q13635 1447 aa19.24■□□□□ 0.67
SFXN1-210ENST00000513725 DDX17Q92841 729 aaKnown RBP19.22■□□□□ 0.67
SFXN1-210ENST00000513725 BCL9LQ86UU0 1499 aa19.22■□□□□ 0.67
SFXN1-210ENST00000513725 MST1RQ04912 1400 aa19.21■□□□□ 0.67
SFXN1-210ENST00000513725 GJD4Q96KN9 370 aaPredicted RBP19.21■□□□□ 0.67
SFXN1-210ENST00000513725 PIK3R4Q99570 1358 aa19.2■□□□□ 0.66
SFXN1-210ENST00000513725 SLC52A1Q9NWF4 448 aa19.2■□□□□ 0.66
SFXN1-210ENST00000513725 ZFYVE9O95405 1425 aa19.19■□□□□ 0.66
SFXN1-210ENST00000513725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.19■□□□□ 0.668e-7■■□□□ 11.6
SFXN1-210ENST00000513725 DUOX2Q9NRD8 1548 aa19.19■□□□□ 0.66
SFXN1-210ENST00000513725 UNC13BO14795 1591 aa19.19■□□□□ 0.66
SFXN1-210ENST00000513725 KANK1Q14678 1352 aa19.18■□□□□ 0.66
SFXN1-210ENST00000513725 SENP3-EIF4A1A0A087X0R7 540 aa19.17■□□□□ 0.66
SFXN1-210ENST00000513725 RIMS2Q9UQ26 1411 aa19.17■□□□□ 0.66
SFXN1-210ENST00000513725 AMOTL2Q9Y2J4 779 aa19.15■□□□□ 0.66
SFXN1-210ENST00000513725 DCAF8L1A6NGE4 600 aa19.14■□□□□ 0.65
SFXN1-210ENST00000513725 BAG6P46379 1132 aa19.14■□□□□ 0.65
SFXN1-210ENST00000513725 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.13■□□□□ 0.65
SFXN1-210ENST00000513725 NOS1P29475 1434 aa19.13■□□□□ 0.65
SFXN1-210ENST00000513725 ADAMTS13Q76LX8 1427 aa19.12■□□□□ 0.65
SFXN1-210ENST00000513725 SPHKAPQ2M3C7 1700 aa19.11■□□□□ 0.65
SFXN1-210ENST00000513725 ERBINQ96RT1 1412 aa19.1■□□□□ 0.65
SFXN1-210ENST00000513725 R3HDM1Q15032 1099 aaKnown RBP19.1■□□□□ 0.65
SFXN1-210ENST00000513725 TRPM2O94759 1503 aa19.09■□□□□ 0.65
SFXN1-210ENST00000513725 LMTK2Q8IWU2 1503 aa19.09■□□□□ 0.65
SFXN1-210ENST00000513725 SOS2Q07890 1332 aaPredicted RBP19.08■□□□□ 0.65
SFXN1-210ENST00000513725 BRWD3Q6RI45 1802 aa19.07■□□□□ 0.64
SFXN1-210ENST00000513725 RALGAPBQ86X10 1494 aa19.06■□□□□ 0.64
SFXN1-210ENST00000513725 MYO5BQ9ULV0 1848 aa19.06■□□□□ 0.64
SFXN1-210ENST00000513725 KIF15Q9NS87 1388 aa19.06■□□□□ 0.64
SFXN1-210ENST00000513725 COL22A1Q8NFW1 1626 aaPredicted RBP19.05■□□□□ 0.64
SFXN1-210ENST00000513725 PTPRUQ92729 1446 aa19.05■□□□□ 0.64
SFXN1-210ENST00000513725 LAMC1P11047 1609 aa19.04■□□□□ 0.64
SFXN1-210ENST00000513725 GLI3P10071 1580 aa19.04■□□□□ 0.64
SFXN1-210ENST00000513725 SEPT12Q8IYM1 358 aa19.04■□□□□ 0.64
SFXN1-210ENST00000513725 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.03■□□□□ 0.64
SFXN1-210ENST00000513725 UNC5CLQ8IV45 518 aa19.03■□□□□ 0.64
SFXN1-210ENST00000513725 GCC2Q8IWJ2 1684 aa19.02■□□□□ 0.64
SFXN1-210ENST00000513725 KRT27Q7Z3Y8 459 aa19.02■□□□□ 0.64
SFXN1-210ENST00000513725 MARF1Q9Y4F3 1742 aaKnown RBP19.02■□□□□ 0.63
SFXN1-210ENST00000513725 MYOM2P54296 1465 aa19.02■□□□□ 0.63
SFXN1-210ENST00000513725 RPRD2Q5VT52 1461 aaKnown RBP19.02■□□□□ 0.63
SFXN1-210ENST00000513725 RRP7BPQ9NSQ0 103 aa19.01■□□□□ 0.63
SFXN1-210ENST00000513725 ADGRL3Q9HAR2 1447 aa19■□□□□ 0.63
SFXN1-210ENST00000513725 TMEM131LA2VDJ0 1609 aa19■□□□□ 0.63
SFXN1-210ENST00000513725 C1QTNF8P60827 252 aa19■□□□□ 0.63
SFXN1-210ENST00000513725 ZNF784Q8NCA9 323 aaPredicted RBP19■□□□□ 0.63
SFXN1-210ENST00000513725 C1orf167Q5SNV9 1468 aa19■□□□□ 0.63
SFXN1-210ENST00000513725 CHGAP10645 457 aaKnown RBP18.99■□□□□ 0.63
SFXN1-210ENST00000513725 EN1Q05925 392 aaPredicted RBP18.99■□□□□ 0.63
SFXN1-210ENST00000513725 XRN1Q8IZH2 1706 aaKnown RBP18.97■□□□□ 0.63
SFXN1-210ENST00000513725 ORAI2Q96SN7 254 aa18.95■□□□□ 0.62
SFXN1-210ENST00000513725 PPP1R1BQ9UD71 204 aaPredicted RBP18.95■□□□□ 0.62
SFXN1-210ENST00000513725 MYOM3Q5VTT5 1437 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms