RNA–Protein interactions for RNA: ENST00000513719.1

SNCAIP-218, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 2,303 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-218ENST00000513719 IQGAP1P46940 1657 aa18.12■□□□□ 0.49
SNCAIP-218ENST00000513719 ZC3H13Q5T200 1668 aaKnown RBP18.11■□□□□ 0.49
SNCAIP-218ENST00000513719 SCAF11Q99590 1463 aaKnown RBP18.1■□□□□ 0.49
SNCAIP-218ENST00000513719 CNGB1Q14028 1251 aaPredicted RBP18.1■□□□□ 0.49
SNCAIP-218ENST00000513719 PIK3C2BO00750 1634 aa18.1■□□□□ 0.49
SNCAIP-218ENST00000513719 REREQ9P2R6 1566 aa18.09■□□□□ 0.49
SNCAIP-218ENST00000513719 KIAA1210Q9ULL0 1709 aa18.09■□□□□ 0.49
SNCAIP-218ENST00000513719 IDI1Q13907 227 aa18.09■□□□□ 0.49
SNCAIP-218ENST00000513719 AGLP35573 1532 aa18.08■□□□□ 0.48
SNCAIP-218ENST00000513719 FBXO31Q5XUX0 539 aaPredicted RBP18.07■□□□□ 0.48
SNCAIP-218ENST00000513719 TMF1P82094 1093 aa18.06■□□□□ 0.48
SNCAIP-218ENST00000513719 PPLO60437 1756 aa18.06■□□□□ 0.48
SNCAIP-218ENST00000513719 PER1O15534 1290 aaPredicted RBP18.06■□□□□ 0.48
SNCAIP-218ENST00000513719 MRS2Q9HD23 443 aa18.05■□□□□ 0.48
SNCAIP-218ENST00000513719 PIK3C2GO75747 1445 aa18.05■□□□□ 0.48
SNCAIP-218ENST00000513719 RPGRIP1LQ68CZ1 1315 aa18.04■□□□□ 0.48
SNCAIP-218ENST00000513719 NUTM2DQ5VT03 806 aaPredicted RBP18.04■□□□□ 0.48
SNCAIP-218ENST00000513719 PREX1Q8TCU6 1659 aa18.03■□□□□ 0.48
SNCAIP-218ENST00000513719 C14orf93Q9H972 538 aaKnown RBP18.03■□□□□ 0.48
SNCAIP-218ENST00000513719 SLC52A1Q9NWF4 448 aa18.03■□□□□ 0.48
SNCAIP-218ENST00000513719 MLECQ14165 292 aa18.02■□□□□ 0.48
SNCAIP-218ENST00000513719 ARHGEF40Q8TER5 1519 aa18.02■□□□□ 0.48
SNCAIP-218ENST00000513719 NEXMIFQ5QGS0 1516 aa18.01■□□□□ 0.47
SNCAIP-218ENST00000513719 FAM9BQ8IZU0 186 aa18■□□□□ 0.47
SNCAIP-218ENST00000513719 PANK3Q9H999 370 aa18■□□□□ 0.47
SNCAIP-218ENST00000513719 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
SNCAIP-218ENST00000513719 HNRNPUQ00839 825 aaKnown RBP eCLIP18■□□□□ 0.47
SNCAIP-218ENST00000513719 MYT1Q01538 1121 aa17.99■□□□□ 0.47
SNCAIP-218ENST00000513719 ERVK-7P63135 1459 aa17.99■□□□□ 0.47
SNCAIP-218ENST00000513719 ADGRB1O14514 1584 aa17.99■□□□□ 0.47
SNCAIP-218ENST00000513719 TMEM132EQ6IEE7 984 aa17.99■□□□□ 0.47
SNCAIP-218ENST00000513719 SETBP1Q9Y6X0 1596 aa17.98■□□□□ 0.47
SNCAIP-218ENST00000513719 CLTCQ00610 1675 aaKnown RBP17.98■□□□□ 0.47
SNCAIP-218ENST00000513719 EIF3AQ14152 1382 aaKnown RBP17.98■□□□□ 0.47
SNCAIP-218ENST00000513719 TMEM131LA2VDJ0 1609 aa17.97■□□□□ 0.47
SNCAIP-218ENST00000513719 VGFO15240 615 aaPredicted RBP17.96■□□□□ 0.47
SNCAIP-218ENST00000513719 MYO5BQ9ULV0 1848 aa17.96■□□□□ 0.47
SNCAIP-218ENST00000513719 RALBP1Q15311 655 aa17.95■□□□□ 0.46
SNCAIP-218ENST00000513719 TRAK1Q9UPV9 953 aa17.95■□□□□ 0.46
SNCAIP-218ENST00000513719 PARD3Q8TEW0 1356 aa17.94■□□□□ 0.46
SNCAIP-218ENST00000513719 ZFYVE9O95405 1425 aa17.93■□□□□ 0.46
SNCAIP-218ENST00000513719 KTN1Q86UP2 1357 aaKnown RBP17.92■□□□□ 0.46
SNCAIP-218ENST00000513719 SENP3Q9H4L4 574 aaPredicted RBP17.92■□□□□ 0.46
SNCAIP-218ENST00000513719 MYO3AQ8NEV4 1616 aa17.92■□□□□ 0.46
SNCAIP-218ENST00000513719 MYBBP1AQ9BQG0 1328 aaKnown RBP17.92■□□□□ 0.46
SNCAIP-218ENST00000513719 PNISRQ8TF01 805 aaKnown RBP17.92■□□□□ 0.46
SNCAIP-218ENST00000513719 SPATA31D1Q6ZQQ2 1576 aa17.91■□□□□ 0.46
SNCAIP-218ENST00000513719 CDCA8Q53HL2 280 aa17.91■□□□□ 0.46
SNCAIP-218ENST00000513719 CC2D1BQ5T0F9 858 aaKnown RBP17.91■□□□□ 0.46
SNCAIP-218ENST00000513719 CENPJQ9HC77 1338 aaPredicted RBP17.9■□□□□ 0.46
SNCAIP-218ENST00000513719 MYOM1P52179 1685 aa17.9■□□□□ 0.46
SNCAIP-218ENST00000513719 ZMYM3Q14202 1370 aa17.89■□□□□ 0.46
SNCAIP-218ENST00000513719 SBNO2Q9Y2G9 1366 aa17.89■□□□□ 0.46
SNCAIP-218ENST00000513719 TMC1Q8TDI8 760 aa17.89■□□□□ 0.45
SNCAIP-218ENST00000513719 BRD4O60885 1362 aaPredicted RBP17.88■□□□□ 0.45
SNCAIP-218ENST00000513719 ASXL1Q8IXJ9 1541 aa17.87■□□□□ 0.45
SNCAIP-218ENST00000513719 A2ML1A8K2U0 1454 aa17.86■□□□□ 0.45
SNCAIP-218ENST00000513719 AMER1Q5JTC6 1135 aaPredicted RBP17.86■□□□□ 0.45
SNCAIP-218ENST00000513719 KDM5AP29375 1690 aaKnown RBP17.86■□□□□ 0.45
SNCAIP-218ENST00000513719 SLC24A1O60721 1099 aa17.85■□□□□ 0.45
SNCAIP-218ENST00000513719 NLRP13Q86W25 1043 aa17.84■□□□□ 0.45
SNCAIP-218ENST00000513719 STAG3Q9UJ98 1225 aa17.84■□□□□ 0.45
SNCAIP-218ENST00000513719 SUPT16HQ9Y5B9 1047 aaKnown RBP17.84■□□□□ 0.45
SNCAIP-218ENST00000513719 LRPPRCP42704 1394 aaKnown RBP17.84■□□□□ 0.45
SNCAIP-218ENST00000513719 QRICH2Q9H0J4 1663 aa17.83■□□□□ 0.45
SNCAIP-218ENST00000513719 ZBED9Q6R2W3 1325 aa17.83■□□□□ 0.44
SNCAIP-218ENST00000513719 KNSTRNQ9Y448 316 aa17.83■□□□□ 0.44
SNCAIP-218ENST00000513719 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
SNCAIP-218ENST00000513719 CARD14Q9BXL6 1004 aa17.82■□□□□ 0.44
SNCAIP-218ENST00000513719 ARHGEF28Q8N1W1 1705 aaKnown RBP17.82■□□□□ 0.44
SNCAIP-218ENST00000513719 ESF1Q9H501 851 aaKnown RBP17.82■□□□□ 0.44
SNCAIP-218ENST00000513719 STK26Q9P289 416 aa17.81■□□□□ 0.44
SNCAIP-218ENST00000513719 SENP3-EIF4A1A0A087X0R7 540 aa17.81■□□□□ 0.44
SNCAIP-218ENST00000513719 ALKQ9UM73 1620 aa17.79■□□□□ 0.44
SNCAIP-218ENST00000513719 RIMS2Q9UQ26 1411 aa17.79■□□□□ 0.44
SNCAIP-218ENST00000513719 SLC12A5Q9H2X9 1139 aa17.78■□□□□ 0.44
SNCAIP-218ENST00000513719 SAFB2Q14151 953 aaKnown RBP eCLIP17.77■□□□□ 0.44
SNCAIP-218ENST00000513719 TULP4Q9NRJ4 1543 aa17.77■□□□□ 0.44
SNCAIP-218ENST00000513719 YTHDC2Q9H6S0 1430 aaKnown RBP17.77■□□□□ 0.43
SNCAIP-218ENST00000513719 PTPRMP28827 1452 aa17.77■□□□□ 0.43
SNCAIP-218ENST00000513719 TNRQ92752 1358 aa17.76■□□□□ 0.43
SNCAIP-218ENST00000513719 NPC1L1Q9UHC9 1359 aa17.76■□□□□ 0.43
SNCAIP-218ENST00000513719 PPP2R1AP30153 589 aa17.76■□□□□ 0.43
SNCAIP-218ENST00000513719 CEBPAP49715 358 aaPredicted RBP17.75■□□□□ 0.43
SNCAIP-218ENST00000513719 FKBP8Q14318 412 aa17.75■□□□□ 0.43
SNCAIP-218ENST00000513719 PRAM1Q96QH2 718 aa17.73■□□□□ 0.43
SNCAIP-218ENST00000513719 EVC2Q86UK5 1308 aa17.73■□□□□ 0.43
SNCAIP-218ENST00000513719 CABP2Q9NPB3 220 aa17.72■□□□□ 0.43
SNCAIP-218ENST00000513719 SETD1AO15047 1707 aaKnown RBP17.71■□□□□ 0.43
SNCAIP-218ENST00000513719 PUS7Q96PZ0 661 aaKnown RBP17.71■□□□□ 0.43
SNCAIP-218ENST00000513719 NRXN3Q9Y4C0 1643 aa17.71■□□□□ 0.43
SNCAIP-218ENST00000513719 MINK1Q8N4C8 1332 aaPredicted RBP17.69■□□□□ 0.42
SNCAIP-218ENST00000513719 NSD3Q9BZ95 1437 aa17.68■□□□□ 0.42
SNCAIP-218ENST00000513719 METP08581 1390 aa17.68■□□□□ 0.42
SNCAIP-218ENST00000513719 UBR1Q8IWV7 1749 aa17.68■□□□□ 0.42
SNCAIP-218ENST00000513719 WAPLQ7Z5K2 1190 aa17.67■□□□□ 0.42
SNCAIP-218ENST00000513719 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNCAIP-218ENST00000513719 POGKQ9P215 609 aa17.67■□□□□ 0.42
SNCAIP-218ENST00000513719 TMEM2Q9UHN6 1383 aa17.67■□□□□ 0.42
SNCAIP-218ENST00000513719 PLEKHH1Q9ULM0 1364 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms