RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 TSR3Q9UJK0 312 aaKnown RBP14.26□□□□□ -0.13
TRAPPC11-210ENST00000513600 SLF2Q8IX21 1173 aa14.25□□□□□ -0.13
TRAPPC11-210ENST00000513600 CCDC102AQ96A19 550 aa14.25□□□□□ -0.13
TRAPPC11-210ENST00000513600 HPS5Q9UPZ3 1129 aa14.24□□□□□ -0.13
TRAPPC11-210ENST00000513600 PPP4CP60510 307 aa14.22□□□□□ -0.13
TRAPPC11-210ENST00000513600 NECTIN2Q92692 538 aa14.22□□□□□ -0.13
TRAPPC11-210ENST00000513600 RNF40O75150 1001 aa14.21□□□□□ -0.13
TRAPPC11-210ENST00000513600 NYAP1Q6ZVC0 841 aa14.21□□□□□ -0.13
TRAPPC11-210ENST00000513600 PHOX2BQ99453 314 aa14.21□□□□□ -0.13
TRAPPC11-210ENST00000513600 WBP1LQ9NX94 342 aa14.2□□□□□ -0.14
TRAPPC11-210ENST00000513600 DAXXQ9UER7 740 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC11-210ENST00000513600 NLRP7Q8WX94 980 aa14.15□□□□□ -0.14
TRAPPC11-210ENST00000513600 AK7Q96M32 723 aa14.15□□□□□ -0.14
TRAPPC11-210ENST00000513600 RSPH4AQ5TD94 716 aa14.14□□□□□ -0.15
TRAPPC11-210ENST00000513600 SULF1Q8IWU6 871 aa14.11□□□□□ -0.15
TRAPPC11-210ENST00000513600 CLCN1P35523 988 aa14.1□□□□□ -0.15
TRAPPC11-210ENST00000513600 MDM2Q00987 491 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC11-210ENST00000513600 SLC24A3Q9HC58 644 aa14.1□□□□□ -0.15
TRAPPC11-210ENST00000513600 PRR14Q9BWN1 585 aa14.09□□□□□ -0.15
TRAPPC11-210ENST00000513600 AMHR2Q16671 573 aa14.08□□□□□ -0.16
TRAPPC11-210ENST00000513600 GPCPD1Q9NPB8 672 aa14.08□□□□□ -0.16
TRAPPC11-210ENST00000513600 DDX11L8A8MPP1 907 aa14.07□□□□□ -0.16
TRAPPC11-210ENST00000513600 TRIM66O15016 1216 aa14.07□□□□□ -0.16
TRAPPC11-210ENST00000513600 SLC10A3P09131 477 aa14.07□□□□□ -0.16
TRAPPC11-210ENST00000513600 APLP1P51693 650 aa14.05□□□□□ -0.16
TRAPPC11-210ENST00000513600 KMT5BQ4FZB7 885 aa14.05□□□□□ -0.16
TRAPPC11-210ENST00000513600 RDH13Q8NBN7 331 aa14.05□□□□□ -0.16
TRAPPC11-210ENST00000513600 TMUB1Q9BVT8 246 aa14.05□□□□□ -0.16
TRAPPC11-210ENST00000513600 CFHP08603 1231 aa14.03□□□□□ -0.16
TRAPPC11-210ENST00000513600 TTLL12Q14166 644 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC11-210ENST00000513600 ACTN4O43707 911 aaKnown RBP14□□□□□ -0.17
TRAPPC11-210ENST00000513600 PLA2G2EQ9NZK7 142 aa14□□□□□ -0.17
TRAPPC11-210ENST00000513600 TPRNQ4KMQ1 711 aa13.99□□□□□ -0.17
TRAPPC11-210ENST00000513600 FAM217BQ9NTX9 383 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC11-210ENST00000513600 ITGBL1O95965 494 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC11-210ENST00000513600 CD46P15529 392 aa13.98□□□□□ -0.17
TRAPPC11-210ENST00000513600 REPIN1Q9BWE0 567 aaKnown RBP13.98□□□□□ -0.17
TRAPPC11-210ENST00000513600 GCGRP47871 477 aa13.97□□□□□ -0.17
TRAPPC11-210ENST00000513600 PDE4DQ08499 809 aa13.97□□□□□ -0.17
TRAPPC11-210ENST00000513600 PCDHB3Q9Y5E6 796 aa13.96□□□□□ -0.17
TRAPPC11-210ENST00000513600 PARP9Q8IXQ6 854 aa13.95□□□□□ -0.18
TRAPPC11-210ENST00000513600 MTRQ99707 1265 aa13.95□□□□□ -0.18
TRAPPC11-210ENST00000513600 SSTR3P32745 418 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC11-210ENST00000513600 TJAP1Q5JTD0 557 aa13.94□□□□□ -0.18
TRAPPC11-210ENST00000513600 IFFO2Q5TF58 517 aa13.94□□□□□ -0.18
TRAPPC11-210ENST00000513600 GIGYF2Q6Y7W6 1299 aaKnown RBP13.94□□□□□ -0.18
TRAPPC11-210ENST00000513600 IL21Q9HBE4 155 aa13.94□□□□□ -0.18
TRAPPC11-210ENST00000513600 KCNC4Q03721 635 aa13.93□□□□□ -0.18
TRAPPC11-210ENST00000513600 COPS2P61201 443 aa13.89□□□□□ -0.19
TRAPPC11-210ENST00000513600 FUT2Q10981 343 aa13.88□□□□□ -0.19
TRAPPC11-210ENST00000513600 GRIPAP1Q4V328 841 aa13.88□□□□□ -0.19
TRAPPC11-210ENST00000513600 BLOC1S3Q6QNY0 202 aa13.88□□□□□ -0.19
TRAPPC11-210ENST00000513600 KDM4AO75164 1064 aa13.87□□□□□ -0.19
TRAPPC11-210ENST00000513600 ATP6V1AP38606 617 aa13.87□□□□□ -0.19
TRAPPC11-210ENST00000513600 NR1I2O75469 434 aa13.86□□□□□ -0.19
TRAPPC11-210ENST00000513600 USP46P62068 366 aa13.85□□□□□ -0.19
TRAPPC11-210ENST00000513600 ZPR1O75312 459 aa13.84□□□□□ -0.19
TRAPPC11-210ENST00000513600 PUS10Q3MIT2 529 aaKnown RBP13.84□□□□□ -0.19
TRAPPC11-210ENST00000513600 NUTM1Q86Y26 1132 aa13.84□□□□□ -0.19
TRAPPC11-210ENST00000513600 MS4A1P11836 297 aa13.83□□□□□ -0.2
TRAPPC11-210ENST00000513600 MORN1Q5T089 497 aa13.83□□□□□ -0.2
TRAPPC11-210ENST00000513600 ZNF516Q92618 1163 aa13.83□□□□□ -0.2
TRAPPC11-210ENST00000513600 BEGAINQ9BUH8 593 aa13.83□□□□□ -0.2
TRAPPC11-210ENST00000513600 SCUBE3Q8IX30 993 aa13.8□□□□□ -0.2
TRAPPC11-210ENST00000513600 HOXA2O43364 376 aa13.77□□□□□ -0.21
TRAPPC11-210ENST00000513600 DIXDC1Q155Q3 683 aa13.77□□□□□ -0.21
TRAPPC11-210ENST00000513600 SPIRE2Q8WWL2 714 aa13.77□□□□□ -0.21
TRAPPC11-210ENST00000513600 KDM4CQ9H3R0 1056 aa13.77□□□□□ -0.21
TRAPPC11-210ENST00000513600 SLC27A5Q9Y2P5 690 aa13.77□□□□□ -0.21
TRAPPC11-210ENST00000513600 A0A0G2JS52 829 aa13.76□□□□□ -0.21
TRAPPC11-210ENST00000513600 PRKCSHP14314 528 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC11-210ENST00000513600 GPBP1L1Q9HC44 474 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC11-210ENST00000513600 SALL2Q9Y467 1007 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC11-210ENST00000513600 NKX2-3Q8TAU0 364 aa13.74□□□□□ -0.21
TRAPPC11-210ENST00000513600 Q3C1V9 767 aa13.73□□□□□ -0.21
TRAPPC11-210ENST00000513600 TBC1D2Q9BYX2 928 aa13.73□□□□□ -0.21
TRAPPC11-210ENST00000513600 TLL1O43897 1013 aa13.72□□□□□ -0.21
TRAPPC11-210ENST00000513600 FMNL1O95466 1100 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC11-210ENST00000513600 ADH1BP00325 375 aa13.72□□□□□ -0.21
TRAPPC11-210ENST00000513600 NEUROD2Q15784 382 aa13.71□□□□□ -0.21
TRAPPC11-210ENST00000513600 THAP11Q96EK4 314 aa13.71□□□□□ -0.21
TRAPPC11-210ENST00000513600 SPSB2Q99619 263 aa13.71□□□□□ -0.21
TRAPPC11-210ENST00000513600 GGCXP38435 758 aa13.7□□□□□ -0.22
TRAPPC11-210ENST00000513600 BRICD5Q6PL45 260 aa13.69□□□□□ -0.22
TRAPPC11-210ENST00000513600 HLA-CQ95604 372 aa13.69□□□□□ -0.22
TRAPPC11-210ENST00000513600 FDX1P10109 184 aa13.68□□□□□ -0.22
TRAPPC11-210ENST00000513600 DDRGK1Q96HY6 314 aa13.68□□□□□ -0.22
TRAPPC11-210ENST00000513600 MOXD2PA6NHM9 499 aa13.67□□□□□ -0.22
TRAPPC11-210ENST00000513600 GJA5P36382 358 aa13.67□□□□□ -0.22
TRAPPC11-210ENST00000513600 PPP1R18Q6NYC8 613 aa13.67□□□□□ -0.22
TRAPPC11-210ENST00000513600 NDUFV2P19404 249 aa13.66□□□□□ -0.22
TRAPPC11-210ENST00000513600 BRPF1P55201 1214 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC11-210ENST00000513600 GUCA2AQ02747 115 aa13.66□□□□□ -0.22
TRAPPC11-210ENST00000513600 RSPH6AQ9H0K4 717 aa13.66□□□□□ -0.22
TRAPPC11-210ENST00000513600 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.66□□□□□ -0.22
TRAPPC11-210ENST00000513600 RNF19BQ6ZMZ0 732 aa13.65□□□□□ -0.22
TRAPPC11-210ENST00000513600 FAM117AQ9C073 453 aa13.65□□□□□ -0.22
TRAPPC11-210ENST00000513600 SLC6A16Q9GZN6 736 aa13.65□□□□□ -0.22
TRAPPC11-210ENST00000513600 RGS20O76081 388 aa13.64□□□□□ -0.23
TRAPPC11-210ENST00000513600 RSBN1LQ6PCB5 846 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms