RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 EFCAB6Q5THR3 1501 aa15.2■□□□□ 0.02
CCL28-203ENST00000513525 CHIC2Q9UKJ5 165 aa15.19■□□□□ 0.02
CCL28-203ENST00000513525 GCC2Q8IWJ2 1684 aa15.19■□□□□ 0.02
CCL28-203ENST00000513525 ANKLE2Q86XL3 938 aa15.18■□□□□ 0.02
CCL28-203ENST00000513525 CPS1P31327 1500 aa15.18■□□□□ 0.02
CCL28-203ENST00000513525 UNC13BO14795 1591 aa15.17■□□□□ 0.02
CCL28-203ENST00000513525 TET3O43151 1660 aa15.17■□□□□ 0.02
CCL28-203ENST00000513525 NPHP4O75161 1426 aaPredicted RBP15.17■□□□□ 0.02
CCL28-203ENST00000513525 STRCP1A6NGW2 1772 aa15.17■□□□□ 0.02
CCL28-203ENST00000513525 SLIT1O75093 1534 aa15.17■□□□□ 0.02
CCL28-203ENST00000513525 SYNMO15061 1565 aa15.17■□□□□ 0.02
CCL28-203ENST00000513525 FAM50AQ14320 339 aaKnown RBP15.17■□□□□ 0.02
CCL28-203ENST00000513525 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
CCL28-203ENST00000513525 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
CCL28-203ENST00000513525 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
CCL28-203ENST00000513525 ARHGAP23Q9P227 1491 aa15.16■□□□□ 0.02
CCL28-203ENST00000513525 ANKRD50Q9ULJ7 1429 aa15.15■□□□□ 0.02
CCL28-203ENST00000513525 ATXN8OSP0DMR3 200 aa15.14■□□□□ 0.01
CCL28-203ENST00000513525 MYO5BQ9ULV0 1848 aa15.14■□□□□ 0.01
CCL28-203ENST00000513525 RPRD2Q5VT52 1461 aaKnown RBP15.13■□□□□ 0.01
CCL28-203ENST00000513525 SCAF11Q99590 1463 aaKnown RBP15.13■□□□□ 0.01
CCL28-203ENST00000513525 NOS1P29475 1434 aa15.13■□□□□ 0.01
CCL28-203ENST00000513525 ROCK1Q13464 1354 aa15.12■□□□□ 0.01
CCL28-203ENST00000513525 IQGAP3Q86VI3 1631 aa15.11■□□□□ 0.01
CCL28-203ENST00000513525 E9PCH4 1651 aa15.11■□□□□ 0.01
CCL28-203ENST00000513525 ADGRB3O60242 1522 aa15.11■□□□□ 0.01
CCL28-203ENST00000513525 XIRP1Q702N8 1843 aaKnown RBP15.09■□□□□ 0.01
CCL28-203ENST00000513525 TMEM2Q9UHN6 1383 aa15.06■□□□□ 0
CCL28-203ENST00000513525 UBAP1LF5GYI3 381 aa15.05■□□□□ -0
CCL28-203ENST00000513525 LTKP29376 864 aa15.05■□□□□ -0
CCL28-203ENST00000513525 TMEM131LA2VDJ0 1609 aa15.05■□□□□ -0
CCL28-203ENST00000513525 ALKQ9UM73 1620 aa15.04■□□□□ -0
CCL28-203ENST00000513525 IDI1Q13907 227 aa15.04■□□□□ -0
CCL28-203ENST00000513525 LRRC7Q96NW7 1537 aa15.04■□□□□ -0
CCL28-203ENST00000513525 TXNDC2Q86VQ3 553 aa15.03■□□□□ -0
CCL28-203ENST00000513525 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
CCL28-203ENST00000513525 SLC52A1Q9NWF4 448 aa15.03■□□□□ -0
CCL28-203ENST00000513525 EID1Q9Y6B2 187 aa15.03■□□□□ -0
CCL28-203ENST00000513525 RRBP1Q9P2E9 1410 aaKnown RBP15.03■□□□□ -0
CCL28-203ENST00000513525 SPHKAPQ2M3C7 1700 aa15.02■□□□□ -0
CCL28-203ENST00000513525 EVX2Q03828 476 aa15.02□□□□□ -0.01
CCL28-203ENST00000513525 STAG3Q9UJ98 1225 aa15.02□□□□□ -0.01
CCL28-203ENST00000513525 PRKAR2AP13861 404 aaKnown RBP15.01□□□□□ -0.01
CCL28-203ENST00000513525 CHD2O14647 1828 aaKnown RBP15□□□□□ -0.01
CCL28-203ENST00000513525 NWD1Q149M9 1564 aa14.99□□□□□ -0.01
CCL28-203ENST00000513525 TOM1O60784 492 aa14.99□□□□□ -0.01
CCL28-203ENST00000513525 PPARGC1BQ86YN6 1023 aaKnown RBP14.99□□□□□ -0.01
CCL28-203ENST00000513525 ZFYVE9O95405 1425 aa14.98□□□□□ -0.01
CCL28-203ENST00000513525 CLEC11AQ9Y240 323 aa14.98□□□□□ -0.01
CCL28-203ENST00000513525 ZBTB22O15209 634 aa14.97□□□□□ -0.01
CCL28-203ENST00000513525 ITGAEP38570 1179 aa14.96□□□□□ -0.02
CCL28-203ENST00000513525 NUP155O75694 1391 aa14.95□□□□□ -0.02
CCL28-203ENST00000513525 DISP3Q9P2K9 1392 aa14.94□□□□□ -0.02
CCL28-203ENST00000513525 NKTRP30414 1462 aaKnown RBP14.94□□□□□ -0.02
CCL28-203ENST00000513525 KIF1BO60333 1816 aa14.94□□□□□ -0.02
CCL28-203ENST00000513525 PLEKHG1Q9ULL1 1385 aa14.93□□□□□ -0.02
CCL28-203ENST00000513525 RIMS2Q9UQ26 1411 aa14.93□□□□□ -0.02
CCL28-203ENST00000513525 DIP2AQ14689 1571 aa14.93□□□□□ -0.02
CCL28-203ENST00000513525 NAIPQ13075 1403 aa14.92□□□□□ -0.02
CCL28-203ENST00000513525 PIP4K2BP78356 416 aa14.92□□□□□ -0.02
CCL28-203ENST00000513525 KCNA6P17658 529 aa14.9□□□□□ -0.02
CCL28-203ENST00000513525 HDGFP51858 240 aaKnown RBP14.9□□□□□ -0.02
CCL28-203ENST00000513525 CLTCL1P53675 1640 aa14.89□□□□□ -0.03
CCL28-203ENST00000513525 HSPA1LP34931 641 aa14.89□□□□□ -0.03
CCL28-203ENST00000513525 SLC26A8Q96RN1 970 aa14.89□□□□□ -0.03
CCL28-203ENST00000513525 HFM1A2PYH4 1435 aa14.89□□□□□ -0.03
CCL28-203ENST00000513525 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.88□□□□□ -0.03
CCL28-203ENST00000513525 TRPM2O94759 1503 aa14.88□□□□□ -0.03
CCL28-203ENST00000513525 MED1Q15648 1581 aaPredicted RBP14.88□□□□□ -0.03
CCL28-203ENST00000513525 C19orf67A6NJJ6 358 aa14.87□□□□□ -0.03
CCL28-203ENST00000513525 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
CCL28-203ENST00000513525 NRXN3Q9Y4C0 1643 aa14.87□□□□□ -0.03
CCL28-203ENST00000513525 TMEM94Q12767 1356 aa14.87□□□□□ -0.03
CCL28-203ENST00000513525 PPP1R15AO75807 674 aaPredicted RBP14.86□□□□□ -0.03
CCL28-203ENST00000513525 ADAMTS13Q76LX8 1427 aa14.86□□□□□ -0.03
CCL28-203ENST00000513525 ROBO1Q9Y6N7 1651 aa14.85□□□□□ -0.03
CCL28-203ENST00000513525 SETBP1Q9Y6X0 1596 aa14.85□□□□□ -0.03
CCL28-203ENST00000513525 CHGAP10645 457 aaKnown RBP14.85□□□□□ -0.03
CCL28-203ENST00000513525 SSUH2Q9Y2M2 353 aa14.84□□□□□ -0.03
CCL28-203ENST00000513525 TBX22Q9Y458 520 aa14.84□□□□□ -0.03
CCL28-203ENST00000513525 PIK3R4Q99570 1358 aa14.84□□□□□ -0.03
CCL28-203ENST00000513525 BCANQ96GW7 911 aa14.83□□□□□ -0.04
CCL28-203ENST00000513525 XRN1Q8IZH2 1706 aaKnown RBP14.83□□□□□ -0.04
CCL28-203ENST00000513525 FAM135BQ49AJ0 1406 aa14.83□□□□□ -0.04
CCL28-203ENST00000513525 NEXMIFQ5QGS0 1516 aa14.83□□□□□ -0.04
CCL28-203ENST00000513525 TRIM26Q12899 539 aaPredicted RBP14.82□□□□□ -0.04
CCL28-203ENST00000513525 ILDR2Q71H61 639 aa14.82□□□□□ -0.04
CCL28-203ENST00000513525 PROSER2Q86WR7 435 aaPredicted RBP14.82□□□□□ -0.04
CCL28-203ENST00000513525 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.81□□□□□ -0.04
CCL28-203ENST00000513525 NCOA3Q9Y6Q9 1424 aa14.81□□□□□ -0.04
CCL28-203ENST00000513525 PPLO60437 1756 aa14.8□□□□□ -0.04
CCL28-203ENST00000513525 SETD1AO15047 1707 aaKnown RBP14.8□□□□□ -0.04
CCL28-203ENST00000513525 PCGF6Q9BYE7 350 aa14.8□□□□□ -0.04
CCL28-203ENST00000513525 MSH6P52701 1360 aa14.79□□□□□ -0.04
CCL28-203ENST00000513525 PHLPP1O60346 1717 aa14.78□□□□□ -0.04
CCL28-203ENST00000513525 NUTM2DQ5VT03 806 aaPredicted RBP14.78□□□□□ -0.04
CCL28-203ENST00000513525 GABBR2O75899 941 aa14.77□□□□□ -0.04
CCL28-203ENST00000513525 MKRN4PQ13434 485 aaPredicted RBP14.76□□□□□ -0.05
CCL28-203ENST00000513525 RBM33Q96EV2 1170 aaKnown RBP14.76□□□□□ -0.05
CCL28-203ENST00000513525 PTPRUQ92729 1446 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms